Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1d15
(765 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0968 - 8111340-8112067,8112496-8112566,8112663-8112837,811... 31 1.3
07_03_0052 - 12833004-12833057,12833917-12833955,12834231-128346... 29 3.1
06_03_0151 + 17270688-17270698,17271149-17271281,17271548-172715... 29 3.1
03_01_0541 + 4064491-4064715,4065018-4065070,4065190-4065226,406... 29 4.1
10_01_0228 + 2417187-2418061,2418127-2418319,2419011-2419025,241... 29 5.4
03_01_0016 + 131141-131236,131743-132043,132125-132341,132440-13... 29 5.4
02_03_0382 + 18352508-18352841,18353817-18354028,18354190-183542... 29 5.4
02_02_0574 - 11701359-11701460,11701469-11701570,11701725-117019... 29 5.4
11_01_0682 - 5575297-5575308,5575391-5575516,5575779-5575885,557... 28 7.1
10_08_0307 - 16654691-16654890,16656230-16656698 28 7.1
06_02_0021 + 10681730-10681816,10681868-10681913,10682296-106823... 28 7.1
04_04_0838 - 28550036-28550237,28550595-28550676,28550972-285510... 28 7.1
05_01_0600 + 5381879-5381995,5382061-5382216,5382521-5382604,538... 28 9.4
01_01_0400 + 3038298-3038863,3039057-3039411,3039504-3040232 28 9.4
>07_01_0968 -
8111340-8112067,8112496-8112566,8112663-8112837,
8112991-8113054,8113351-8113671,8114413-8114438,
8114495-8114573
Length = 487
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/62 (24%), Positives = 34/62 (54%)
Frame = +1
Query: 421 HITGLRVTANAGLQVERDGKIRAENIVMDLSASNIAVNLENAEIISGFINTIGPFIFDSI 600
++ G+ + AG+ + G I + + ++S S+ + + N +I GF N++ P I + +
Sbjct: 385 NVVGVNI-GTAGMLLGIQGDIFSNICLSNVSLSSKSADPWNCSLIEGFSNSVAPEICEQL 443
Query: 601 KP 606
+P
Sbjct: 444 RP 445
>07_03_0052 -
12833004-12833057,12833917-12833955,12834231-12834651,
12834731-12834901,12834984-12835816,12835898-12836359,
12836438-12837171,12837260-12837389
Length = 947
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/55 (23%), Positives = 28/55 (50%)
Frame = +1
Query: 598 IKPYVLKEAYATIKTTMNEKIDEVAGDLQFPNSISPLDMVIADVRKKSSPNGHGS 762
+K V++E A++ + E++++V D+ P +P + +SP+ H S
Sbjct: 364 LKVEVIQELEASMNARVEERVNKVLADMNIPRVTTPAVHPTPRAQHDASPSQHSS 418
>06_03_0151 +
17270688-17270698,17271149-17271281,17271548-17271589,
17271706-17271815,17271957-17272035,17272114-17272287,
17272386-17272466,17272761-17272988,17273067-17273402,
17273501-17273586,17273642-17273783,17274596-17274687,
17274770-17274904,17275142-17275304,17275393-17275482,
17275568-17275753,17276109-17276141,17276700-17276762,
17276839-17276901,17276983-17277042,17277258-17277410,
17277530-17277613,17278434-17278610,17278685-17278791,
17278858-17279071,17279158-17279261,17279926-17280061,
17280191-17280316,17280682-17280792,17280968-17281066,
17281367-17281633,17281707-17281822,17281853-17282084,
17282597-17282664,17282682-17282807,17282980-17283040
Length = 1495
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = -1
Query: 447 RCHP--QSCYVNSERAPNRIEPRREGVV-AACLQFFESHHGVGLHCSDIG 307
+C P C+V + P+ I P ++ AC F + GLHC D G
Sbjct: 428 QCGPVLMGCFVTVKAPPSSILPSGSSLLDKACETSFSEYELNGLHCQDTG 477
>03_01_0541 +
4064491-4064715,4065018-4065070,4065190-4065226,
4065409-4065474,4065809-4065907,4066000-4066153,
4066267-4066343,4066438-4066500
Length = 257
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +3
Query: 498 RHGLIGQQHRCEPGKRRNHLRIYQ 569
RH L G+ EPGK H RIYQ
Sbjct: 150 RHPLHGETFPAEPGKSSFHCRIYQ 173
>10_01_0228 +
2417187-2418061,2418127-2418319,2419011-2419025,
2419859-2419975
Length = 399
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -1
Query: 396 IEPRREGVVAACLQFFESHHGVGLHCSDIG 307
+EP R G L F E H+ V L C+DIG
Sbjct: 296 VEPGRHGAAPTILGFVEEHNEV-LLCTDIG 324
>03_01_0016 + 131141-131236,131743-132043,132125-132341,132440-132773,
132883-132996,133065-133193,133293-133469,133555-133746,
134844-134981,135327-135559,135900-136003,136633-136727,
136817-137053,137801-137922,138252-138354,138750-138826,
138909-139017,139107-139253,139953-140000,140292-140492,
140589-140738,140917-141002,141088-141193,141278-141373,
141759-141911,142647-142819,142923-142986,144056-144193,
144548-144595,144690-144836,144907-144968,146540-146645,
147357-147461,147548-147679,147765-147974,148070-148171,
148261-148398
Length = 1729
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +1
Query: 598 IKPYVLKEAYATIKTTMNEKIDEVAGDLQFPNSISPLDMVIAD 726
+K Y L+ TIK++++ +AG+L + N PL + + D
Sbjct: 1171 LKDYALESDNNTIKSSVHSIARTIAGNLAYANCKEPLCVALTD 1213
>02_03_0382 +
18352508-18352841,18353817-18354028,18354190-18354277,
18355017-18355474
Length = 363
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +1
Query: 73 EEVSSEDEKLSEGEKKLSHNILAILEHYKQPDPTGLPGAKLPDPYP 210
E+ +DEK E EK S N + E K+ DP+ L A L YP
Sbjct: 286 EKKEGDDEKEKEKEKDDS-NAAEVEEKDKEKDPSALAAANLYMHYP 330
>02_02_0574 - 11701359-11701460,11701469-11701570,11701725-11701922,
11702090-11704052,11705312-11706126
Length = 1059
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +1
Query: 427 TGLRVTANAGLQVERDGKIRAENIVMDLSASNIAVNLENAEIISGFINTIGPF 585
+G+ + A A +++DG+ ++ L S ++L+ E + I T+GPF
Sbjct: 959 SGIIIDALAFSYLDKDGERHTTSLWGGLGGSVQLIDLDEREFLMEVIGTVGPF 1011
>11_01_0682 -
5575297-5575308,5575391-5575516,5575779-5575885,
5575911-5576013,5576122-5576187,5576378-5576461,
5577448-5577522,5577615-5577668,5577752-5577895,
5578632-5578685,5578877-5578981,5579076-5579173,
5579660-5579729,5580444-5580566,5580647-5580727,
5580996-5581476,5581684-5581816,5582550-5582598,
5582704-5582892,5583642-5583703,5583762-5585316
Length = 1256
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -1
Query: 624 SFLEDVRFDRIEDERSDGVDKS*DDFCV 541
+F + D+ E+ RSDG+DK DD C+
Sbjct: 494 NFFRKLFKDKHEERRSDGLDKHDDDGCL 521
>10_08_0307 - 16654691-16654890,16656230-16656698
Length = 222
Score = 28.3 bits (60), Expect = 7.1
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2
Query: 74 RRCRVKMKNFRKAKKNSVIISWLFWSIINSRI 169
R C + ++ R+ K +++SW W NSR+
Sbjct: 87 RHCPLGVEKRRRVKSLLILVSWEIWKERNSRV 118
>06_02_0021 +
10681730-10681816,10681868-10681913,10682296-10682388,
10682802-10682888,10683297-10683331
Length = 115
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +1
Query: 10 KIALCLVLVILFQFRNCQEIPEEVSSEDEKLSEGEK 117
KIA C + + F PE V +DEK E EK
Sbjct: 26 KIAFCYITKVTFVNTFDLACPESVQDDDEKRQESEK 61
>04_04_0838 -
28550036-28550237,28550595-28550676,28550972-28551011,
28551342-28551416,28551448-28551543,28551710-28551805,
28551897-28551974,28552064-28552170,28552450-28552477,
28552777-28552898,28554106-28554172,28554336-28554508,
28554763-28554846,28555616-28555733,28556093-28556164,
28557026-28557118,28557484-28557636,28558000-28558086,
28559436-28559528,28560416-28560643,28561106-28561207,
28561390-28561596,28561798-28561846,28562385-28562537,
28562649-28562712,28562905-28563175,28564008-28564072,
28564184-28564337
Length = 1052
Score = 28.3 bits (60), Expect = 7.1
Identities = 22/90 (24%), Positives = 38/90 (42%)
Frame = +1
Query: 313 IGAMEAHAVMTLEKLQARGNYTFATWFNSVRGPFTVHITGLRVTANAGLQVERDGKIRAE 492
+ A E HA +E + T +FNS TVH+ L + + LQV +
Sbjct: 578 LSAHERHATSVVEVFRIVEE-TIEQFFNSSLPLDTVHLRSLLIGITSSLQVYLHHMENQQ 636
Query: 493 NIVMDLSASNIAVNLENAEIISGFINTIGP 582
+ MD+ + I+ + + I++I P
Sbjct: 637 GLTMDVKSGIISQQVNQVSNLLVGIDSIVP 666
>05_01_0600 +
5381879-5381995,5382061-5382216,5382521-5382604,
5382708-5382833,5383801-5383845,5384423-5384554,
5384682-5384777,5384880-5385041,5385156-5385300,
5385753-5385825,5386002-5386062,5386419-5386529,
5386620-5387093,5387173-5387207,5387760-5388318
Length = 791
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 73 EEVSSEDEKLSEGEKKLSHNILAILEHYKQPDPTGL 180
E+V +D KLSE L +L+IL H+K+ + G+
Sbjct: 90 EQVLLDDVKLSEQVMDLIFFVLSILSHWKKENHLGV 125
>01_01_0400 + 3038298-3038863,3039057-3039411,3039504-3040232
Length = 549
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 5/44 (11%)
Frame = +1
Query: 64 EIPEEVSSEDEKLSEGEKKLSH-----NILAILEHYKQPDPTGL 180
+I E+ + E E L++GE+K SH N++A +E + P+ L
Sbjct: 410 KIEEQETPEKENLTKGEEKESHDMMLDNVVAKIEEQETPEKENL 453
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.135 0.386
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,230,710
Number of Sequences: 37544
Number of extensions: 453224
Number of successful extensions: 1189
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1187
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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