Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1d15
(765 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132860-6|CAB60526.1| 373|Caenorhabditis elegans Hypothetical ... 32 0.39
AF039052-4|AAF98630.1| 981|Caenorhabditis elegans Proteasome re... 31 1.2
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ... 29 3.6
U80843-4|AAB37964.1| 470|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z93385-1|CAB07638.1| 312|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z68215-1|CAA92450.1| 517|Caenorhabditis elegans Hypothetical pr... 28 6.3
U80453-4|AAK31441.2| 674|Caenorhabditis elegans Trehalase prote... 28 6.3
AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein. 28 6.3
AJ512339-1|CAD54512.1| 674|Caenorhabditis elegans trehalase pro... 28 6.3
Z99772-1|CAB16921.1| 794|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z75550-14|CAA99932.1| 794|Caenorhabditis elegans Hypothetical p... 28 8.4
Z68120-3|CAA92201.1| 266|Caenorhabditis elegans Hypothetical pr... 28 8.4
AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain sp... 28 8.4
AF047658-5|AAC04416.3| 434|Caenorhabditis elegans Hypothetical ... 28 8.4
AC006722-3|AAK68421.3| 404|Caenorhabditis elegans Hypothetical ... 28 8.4
AC006645-8|AAF39848.1| 452|Caenorhabditis elegans Hypothetical ... 28 8.4
AL021474-5|CAA16307.2| 673|Caenorhabditis elegans Hypothetical ... 25 9.0
>AL132860-6|CAB60526.1| 373|Caenorhabditis elegans Hypothetical
protein Y56A3A.9 protein.
Length = 373
Score = 32.3 bits (70), Expect = 0.39
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +1
Query: 160 QPDPTGLPGAKLP--DPYPVPDVKQSLTLGTMNFKNIALYGTNEFRLNYVKAD-IGAMEA 330
QP P LPG + P P P+P + L + ++ I + TNE RL + D + M
Sbjct: 27 QPPPQDLPGLQDPPLTPLPLPPLLCPHPLSLLTWEGIQIPTTNECRLLGLHFDSMLCMRE 86
Query: 331 HAVMTLEKLQARGN 372
H ++LQ++ N
Sbjct: 87 HHAQIKKRLQSQLN 100
>AF039052-4|AAF98630.1| 981|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 1 protein.
Length = 981
Score = 30.7 bits (66), Expect = 1.2
Identities = 10/38 (26%), Positives = 25/38 (65%)
Frame = +1
Query: 61 QEIPEEVSSEDEKLSEGEKKLSHNILAILEHYKQPDPT 174
+++PE+ + E++SE ++KL ++ +++ +PD T
Sbjct: 20 KKVPEKAEPKKEEMSEEDQKLEEDLNLLVQRLSEPDTT 57
>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
protein F39C12.1 protein.
Length = 5105
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 97 KLSEGEKKLSHNILAILEHYKQPDPTGLPGAKLPDPYPVPDVK 225
K S+GEKK+ N + + P P P + P+P P P V+
Sbjct: 2795 KNSKGEKKVKENTAPVQQ---APVPVSPPREETPEPTPSPPVR 2834
>U80843-4|AAB37964.1| 470|Caenorhabditis elegans Hypothetical
protein C32B5.9 protein.
Length = 470
Score = 28.7 bits (61), Expect = 4.8
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = +1
Query: 286 FRLNYVKADIGAMEAHAVMTLEKLQARGNYTFATWFNSVRGPFTVHITGLRVTANAGLQV 465
F L+ + + E + L+ L+ GN + NS+R V+ G R++ L V
Sbjct: 173 FHLSQQYPSLLSTERSVPLRLDSLKLGGN---SDSVNSIRCELAVYRHGGRLSKKFKLDV 229
Query: 466 ERDGKIRAENIVMDLSASNIAVNLE-NAEI 552
DGK+ NIV+ I V+L N EI
Sbjct: 230 TEDGKVDM-NIVVVEGLGEILVDLRGNREI 258
>Z93385-1|CAB07638.1| 312|Caenorhabditis elegans Hypothetical
protein M01E5.1 protein.
Length = 312
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -2
Query: 755 CPFGELFFLTSAMTISSGDIEFGNCKSPATSSIFSF 648
CP GE + IS+ + +FG CK+ T + F
Sbjct: 23 CPNGEFCYRDIPKRISNNETKFGCCKASCTETSMPF 58
>Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical
protein R03E1.1 protein.
Length = 1043
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +1
Query: 67 IPEEVSSEDEKLSEGEKKLSHNILAILEHYKQPDPTGLPGAKLPDP 204
+P + S +S + L+H +A + P P P KLPDP
Sbjct: 235 VPPPIPSRAPVMSPVQSPLTHPPVAPMPRCPPPLPPRTPSMKLPDP 280
>Z68215-1|CAA92450.1| 517|Caenorhabditis elegans Hypothetical
protein C53B4.1 protein.
Length = 517
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +1
Query: 499 VMDLSASNIAVNLENAEIISGFINTIGPFIFDSIKPYV 612
+ DL+ +++ NL + +SG + +I FI +PY+
Sbjct: 321 ITDLNGADMTKNLYLGQFLSGLVLSIAQFIIGMTEPYL 358
>U80453-4|AAK31441.2| 674|Caenorhabditis elegans Trehalase protein
5 protein.
Length = 674
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +1
Query: 634 IKTTMNEKIDEVAGDLQFPNSISPLD-MVIADVRKKSSP 747
I T+MNE+ ++ FPN SP++ M+I +RK ++P
Sbjct: 507 IPTSMNEETNQ---QWDFPNGWSPMNHMIIEGLRKSNNP 542
>AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein.
Length = 1043
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +1
Query: 67 IPEEVSSEDEKLSEGEKKLSHNILAILEHYKQPDPTGLPGAKLPDP 204
+P + S +S + L+H +A + P P P KLPDP
Sbjct: 235 VPPPIPSRAPVMSPVQSPLTHPPVAPMPRCPPPLPPRTPSMKLPDP 280
>AJ512339-1|CAD54512.1| 674|Caenorhabditis elegans trehalase
protein.
Length = 674
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +1
Query: 634 IKTTMNEKIDEVAGDLQFPNSISPLD-MVIADVRKKSSP 747
I T+MNE+ ++ FPN SP++ M+I +RK ++P
Sbjct: 507 IPTSMNEETNQ---QWDFPNGWSPMNHMIIEGLRKSNNP 542
>Z99772-1|CAB16921.1| 794|Caenorhabditis elegans Hypothetical
protein H05L14.1 protein.
Length = 794
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +1
Query: 103 SEGEKKLSHNILAILEHYKQPDPTGLPGAKLPDPYPVPD-VKQSLTLGTMN 252
S +K L+ + P G P A P P PV D K+ T+ TM+
Sbjct: 16 SNRKKNLTKELSREASRMGAPSQMGAPSAVTPIPVPVSDPTKKGTTMSTMS 66
>Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical protein
R31.1 protein.
Length = 4063
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 653 KRLMKWRAICSSQTLYRHWIWSL 721
K L K RA+C T YR W+ L
Sbjct: 1703 KLLSKHRALCEDMTTYRQWLEKL 1725
>Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical protein
R31.1 protein.
Length = 4063
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 653 KRLMKWRAICSSQTLYRHWIWSL 721
K L K RA+C T YR W+ L
Sbjct: 1703 KLLSKHRALCEDMTTYRQWLEKL 1725
>Z75550-14|CAA99932.1| 794|Caenorhabditis elegans Hypothetical
protein H05L14.1 protein.
Length = 794
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +1
Query: 103 SEGEKKLSHNILAILEHYKQPDPTGLPGAKLPDPYPVPD-VKQSLTLGTMN 252
S +K L+ + P G P A P P PV D K+ T+ TM+
Sbjct: 16 SNRKKNLTKELSREASRMGAPSQMGAPSAVTPIPVPVSDPTKKGTTMSTMS 66
>Z68120-3|CAA92201.1| 266|Caenorhabditis elegans Hypothetical
protein T24C2.3 protein.
Length = 266
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = -3
Query: 217 LELGMDLVV*-LPAVPWDPAVYNAPE*PRYYD*VFFRLPKVFHLHS 83
L+LG DLV A+P Y+ PE P D V +++P+ FH ++
Sbjct: 153 LKLGDDLVKRNTAALPLSFDSYDVPELPASCDFVSYQMPQQFHYYT 198
>AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain
spectrin homolog Sma1 protein.
Length = 4063
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 653 KRLMKWRAICSSQTLYRHWIWSL 721
K L K RA+C T YR W+ L
Sbjct: 1703 KLLSKHRALCEDMTTYRQWLEKL 1725
>AF047658-5|AAC04416.3| 434|Caenorhabditis elegans Hypothetical
protein K03H6.5 protein.
Length = 434
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/43 (30%), Positives = 27/43 (62%)
Frame = +1
Query: 19 LCLVLVILFQFRNCQEIPEEVSSEDEKLSEGEKKLSHNILAIL 147
L + L+ L + R+ +E+ ++ ++E EKK++H +LAI+
Sbjct: 242 LNISLIRLVKRRHSEELLVRNAAGPSSMAEQEKKMTHTVLAIV 284
>AC006722-3|AAK68421.3| 404|Caenorhabditis elegans Hypothetical
protein Y19D10A.8 protein.
Length = 404
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 526 AVNLENAEIISGFINTIGPFIF 591
++ L N + ISGFI+ +G F+F
Sbjct: 100 SIGLRNTQTISGFISGLGSFLF 121
>AC006645-8|AAF39848.1| 452|Caenorhabditis elegans Hypothetical
protein F56A4.10 protein.
Length = 452
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 526 AVNLENAEIISGFINTIGPFIF 591
++ L N + ISGFI+ +G F+F
Sbjct: 64 SIGLRNTQTISGFISGLGSFLF 85
>AL021474-5|CAA16307.2| 673|Caenorhabditis elegans Hypothetical
protein Y32F6A.2 protein.
Length = 673
Score = 25.4 bits (53), Expect(2) = 9.0
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -1
Query: 261 VFKIHSSKSE*LFDVWNWVWIW 196
VF +SE D W WVW W
Sbjct: 327 VFTAFFYQSEGYEDKWMWVWSW 348
Score = 20.6 bits (41), Expect(2) = 9.0
Identities = 4/16 (25%), Positives = 10/16 (62%)
Frame = -1
Query: 210 WVWIW*FSSRQSRGIR 163
W+W+W ++ + +R
Sbjct: 342 WMWVWSWADAAAHALR 357
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.135 0.386
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,699,555
Number of Sequences: 27780
Number of extensions: 373554
Number of successful extensions: 1160
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1093
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1159
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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