Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1d14
(692 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ340626-1|ABC65814.1| 782|Caenorhabditis elegans chondroitin p... 33 0.26
AF022968-9|AAB69883.3| 782|Caenorhabditis elegans Chondroitin p... 33 0.26
Z82282-10|CAB05277.2| 600|Caenorhabditis elegans Hypothetical p... 31 0.78
Z70270-7|CAH04652.1| 175|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z82077-8|CAB63329.1| 459|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z80344-3|CAB02488.2| 491|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z98866-14|CAB11553.1| 524|Caenorhabditis elegans Hypothetical p... 28 5.5
U80439-6|AAB37642.1| 564|Caenorhabditis elegans Ezrin/radixin/m... 28 5.5
U80439-5|AAB37643.1| 563|Caenorhabditis elegans Ezrin/radixin/m... 28 5.5
AY643539-1|AAT66915.1| 566|Caenorhabditis elegans ERM-1C protein. 28 5.5
AY643538-1|AAT66914.1| 563|Caenorhabditis elegans ERM-1A protein. 28 5.5
AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical ... 28 5.5
AB107270-3|BAC98358.1| 564|Caenorhabditis elegans ERM-1B protein. 28 5.5
AB107270-2|BAC98357.1| 566|Caenorhabditis elegans ERM-1Asv prot... 28 5.5
AB107270-1|BAC98356.1| 563|Caenorhabditis elegans ERM-1A protein. 28 5.5
AB107269-1|BAC98355.1| 564|Caenorhabditis elegans ERM-1B protein. 28 5.5
AB107268-1|BAC98354.1| 563|Caenorhabditis elegans ERM-1A protein. 28 5.5
U28944-18|AAA68375.2| 246|Caenorhabditis elegans Helix loop hel... 28 7.3
U13645-4|AAA20986.2| 529|Caenorhabditis elegans Hypothetical pr... 28 7.3
U00031-6|AAP68961.1| 627|Caenorhabditis elegans Hypothetical pr... 28 7.3
AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical ... 28 7.3
AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical... 27 9.6
>DQ340626-1|ABC65814.1| 782|Caenorhabditis elegans chondroitin
proteoglycan-4 protein.
Length = 782
Score = 32.7 bits (71), Expect = 0.26
Identities = 24/113 (21%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Frame = +3
Query: 327 IYVMNKVADNNVQNIKCSQMNTKNKSKKTKDLSQADELCIKSQEHLNETLANTL-HINNI 503
+Y NK + N+ K + +T ++ + +D + + + S H N T + L HI+
Sbjct: 458 MYSNNKTEELNISE-KNNVTSTFSEPSEKEDEASTTVISVISPLHTNATDSEILEHISEK 516
Query: 504 NSNLTNGTSDHSNGSSEVLSEKADGQGETVNKVTNDVNSVQHNDTSNNFEGKK 662
++ ++G+S +G +G GE ++ NS + N + ++ E +
Sbjct: 517 STEESSGSSGEMSGDGSDNEASGEGSGEYDASGSSGDNSGEFNSSGSSGEASE 569
>AF022968-9|AAB69883.3| 782|Caenorhabditis elegans Chondroitin
proteoglycan protein 4 protein.
Length = 782
Score = 32.7 bits (71), Expect = 0.26
Identities = 24/113 (21%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Frame = +3
Query: 327 IYVMNKVADNNVQNIKCSQMNTKNKSKKTKDLSQADELCIKSQEHLNETLANTL-HINNI 503
+Y NK + N+ K + +T ++ + +D + + + S H N T + L HI+
Sbjct: 458 MYSNNKTEELNISE-KNNVTSTFSEPSEKEDEASTTVISVISPLHTNATDSEILEHISEK 516
Query: 504 NSNLTNGTSDHSNGSSEVLSEKADGQGETVNKVTNDVNSVQHNDTSNNFEGKK 662
++ ++G+S +G +G GE ++ NS + N + ++ E +
Sbjct: 517 STEESSGSSGEMSGDGSDNEASGEGSGEYDASGSSGDNSGEFNSSGSSGEASE 569
>Z82282-10|CAB05277.2| 600|Caenorhabditis elegans Hypothetical
protein T07G12.6 protein.
Length = 600
Score = 31.1 bits (67), Expect = 0.78
Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Frame = +3
Query: 306 MCK*PR*IYVMNKVADNNVQNIKCSQMNTKNKSKKTKDLSQADELCIKSQ---EHLNETL 476
MCK R I + +K + + Q + SKK KDL++ + C K +H + T
Sbjct: 502 MCKGIRNIRLHHKKSHPDEQLTGFGIKSVVRTSKKGKDLAKVWDECFKKNRVLQHGSGTD 561
Query: 477 ANTLHINNINSNLTNGTSDHSNGSSEVLSEKAD 575
+N LH + + +G+ + L E D
Sbjct: 562 SNLLHFSRQDKGSKRSQKSMDSGAKQKLDEARD 594
>Z70270-7|CAH04652.1| 175|Caenorhabditis elegans Hypothetical
protein C53D6.10 protein.
Length = 175
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 363 QNIKCSQMNTKNKSKKTKDLSQADELCIKS-QEHLNETLANTL 488
+N K S+ TKNK KK K + ADE + S +E L+ +TL
Sbjct: 90 KNGKSSETKTKNKVKKNKSKASADESQMGSAEERLSTNRPSTL 132
>Z82077-8|CAB63329.1| 459|Caenorhabditis elegans Hypothetical
protein W09C5.2 protein.
Length = 459
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/76 (21%), Positives = 35/76 (46%)
Frame = +3
Query: 378 SQMNTKNKSKKTKDLSQADELCIKSQEHLNETLANTLHINNINSNLTNGTSDHSNGSSEV 557
++ + K + + +S +EL ++++ ++ A + + + S L NG S S +
Sbjct: 354 TEKTSARKKRSDERMSALEELEQQNKQKIDAKRAEIIRLRHEISELKNGNLTSSQTSLAM 413
Query: 558 LSEKADGQGETVNKVT 605
+E Q T+N T
Sbjct: 414 YNENNHSQNSTLNSTT 429
>Z80344-3|CAB02488.2| 491|Caenorhabditis elegans Hypothetical
protein F15D4.5 protein.
Length = 491
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/77 (18%), Positives = 35/77 (45%)
Frame = +3
Query: 333 VMNKVADNNVQNIKCSQMNTKNKSKKTKDLSQADELCIKSQEHLNETLANTLHINNINSN 512
++ K+ + NI+C++ K + ++++ + + Q N TLA + ++
Sbjct: 233 LITKIDKTVIDNIRCTKDVAKIVKQLVENINSTHAVNKEIQNDKNSTLAEAKRTITLANS 292
Query: 513 LTNGTSDHSNGSSEVLS 563
N D +N + E ++
Sbjct: 293 TINSNKDWNNNTQEAIN 309
>Z98866-14|CAB11553.1| 524|Caenorhabditis elegans Hypothetical
protein Y49E10.17 protein.
Length = 524
Score = 28.3 bits (60), Expect = 5.5
Identities = 20/105 (19%), Positives = 42/105 (40%)
Frame = +3
Query: 366 NIKCSQMNTKNKSKKTKDLSQADELCIKSQEHLNETLANTLHINNINSNLTNGTSDHSNG 545
NI S N S ++ S + + + + + + +N +SN+++ + SNG
Sbjct: 96 NISSSSRQPSNGSFRSSGSSNGSSSSSRRSSNGSSSSSGSTS-DNSSSNISSSSRRSSNG 154
Query: 546 SSEVLSEKADGQGETVNKVTNDVNSVQHNDTSNNFEGKKTTMPSI 680
SS S + G ++ ++S ++N + P I
Sbjct: 155 SSRSSSSSSVGSMSSIASNVGSIDSFSDGSVNSNSNQQLVPNPEI 199
>U80439-6|AAB37642.1| 564|Caenorhabditis elegans
Ezrin/radixin/moesin protein 1,isoform b protein.
Length = 564
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +3
Query: 444 IKSQEHLNETLANTLHINNINSNLTNGTSDHSNGSSEVLSE 566
I SQ+H + +N+ H++N +++ T D NG++E+ ++
Sbjct: 444 IHSQQH-TQHYSNSHHVSNGHAHDETATDDEDNGATELTND 483
>U80439-5|AAB37643.1| 563|Caenorhabditis elegans
Ezrin/radixin/moesin protein 1,isoform a protein.
Length = 563
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +3
Query: 444 IKSQEHLNETLANTLHINNINSNLTNGTSDHSNGSSEVLSE 566
I SQ+H + +N+ H++N +++ T D NG++E+ ++
Sbjct: 443 IHSQQH-TQHYSNSHHVSNGHAHDETATDDEDNGATELTND 482
>AY643539-1|AAT66915.1| 566|Caenorhabditis elegans ERM-1C protein.
Length = 566
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +3
Query: 444 IKSQEHLNETLANTLHINNINSNLTNGTSDHSNGSSEVLSE 566
I SQ+H + +N+ H++N +++ T D NG++E+ ++
Sbjct: 446 IHSQQH-TQHYSNSHHVSNGHAHDETATDDEDNGATELTND 485
>AY643538-1|AAT66914.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +3
Query: 444 IKSQEHLNETLANTLHINNINSNLTNGTSDHSNGSSEVLSE 566
I SQ+H + +N+ H++N +++ T D NG++E+ ++
Sbjct: 443 IHSQQH-TQHYSNSHHVSNGHAHDETATDDEDNGATELTND 482
>AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical
protein Y26D4A.14 protein.
Length = 952
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +3
Query: 495 NNINSNLTNGTSDHSN--GSSEVLSEKADGQGETVNKVTNDVNSVQHNDTSNNF 650
+N SN+ + SN SS +S+K +G G +NK + + + + +NNF
Sbjct: 676 SNTESNIKTSSIKESNIETSSLKVSKKIEGSGNKMNKKSKKSDDKKISKANNNF 729
>AB107270-3|BAC98358.1| 564|Caenorhabditis elegans ERM-1B protein.
Length = 564
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +3
Query: 444 IKSQEHLNETLANTLHINNINSNLTNGTSDHSNGSSEVLSE 566
I SQ+H + +N+ H++N +++ T D NG++E+ ++
Sbjct: 444 IHSQQH-TQHYSNSHHVSNGHAHDETATDDEDNGATELTND 483
>AB107270-2|BAC98357.1| 566|Caenorhabditis elegans ERM-1Asv
protein.
Length = 566
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +3
Query: 444 IKSQEHLNETLANTLHINNINSNLTNGTSDHSNGSSEVLSE 566
I SQ+H + +N+ H++N +++ T D NG++E+ ++
Sbjct: 446 IHSQQH-TQHYSNSHHVSNGHAHDETATDDEDNGATELTND 485
>AB107270-1|BAC98356.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +3
Query: 444 IKSQEHLNETLANTLHINNINSNLTNGTSDHSNGSSEVLSE 566
I SQ+H + +N+ H++N +++ T D NG++E+ ++
Sbjct: 443 IHSQQH-TQHYSNSHHVSNGHAHDETATDDEDNGATELTND 482
>AB107269-1|BAC98355.1| 564|Caenorhabditis elegans ERM-1B protein.
Length = 564
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +3
Query: 444 IKSQEHLNETLANTLHINNINSNLTNGTSDHSNGSSEVLSE 566
I SQ+H + +N+ H++N +++ T D NG++E+ ++
Sbjct: 444 IHSQQH-TQHYSNSHHVSNGHAHDETATDDEDNGATELTND 483
>AB107268-1|BAC98354.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +3
Query: 444 IKSQEHLNETLANTLHINNINSNLTNGTSDHSNGSSEVLSE 566
I SQ+H + +N+ H++N +++ T D NG++E+ ++
Sbjct: 443 IHSQQH-TQHYSNSHHVSNGHAHDETATDDEDNGATELTND 482
>U28944-18|AAA68375.2| 246|Caenorhabditis elegans Helix loop helix
protein 14 protein.
Length = 246
Score = 27.9 bits (59), Expect = 7.3
Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 2/99 (2%)
Frame = +3
Query: 387 NTKNKSKKTKDLSQADEL--CIKSQEHLNETLANTLHINNINSNLTNGTSDHSNGSSEVL 560
N TK S+AD L +K + L L +++S+ + T ++SN +
Sbjct: 127 NRLQPKNHTKKWSKADTLREAVKYIQQLQVLLNQDPQQPSVSSSTPDYTMNNSNNFNNYA 186
Query: 561 SEKADGQGETVNKVTNDVNSVQHNDTSNNFEGKKTTMPS 677
++ N + SV H D S+NF +++ S
Sbjct: 187 VKEEFSMYLPQNYCPQNQMSVPHGDVSHNFNSPTSSVSS 225
>U13645-4|AAA20986.2| 529|Caenorhabditis elegans Hypothetical
protein C05D10.1a protein.
Length = 529
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/73 (23%), Positives = 33/73 (45%)
Frame = +3
Query: 333 VMNKVADNNVQNIKCSQMNTKNKSKKTKDLSQADELCIKSQEHLNETLANTLHINNINSN 512
+MN + + CS++N ++ D S +L + + +TL + +N + S
Sbjct: 72 IMNHLHAPQCKCTTCSKVNQPGAEEQKNDTSVLSQLFPNASDQQLKTLLDLSKMNKLPSQ 131
Query: 513 LTNGTSDHSNGSS 551
+ + D NGSS
Sbjct: 132 VVH--KDQQNGSS 142
>U00031-6|AAP68961.1| 627|Caenorhabditis elegans Hypothetical
protein B0361.3 protein.
Length = 627
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -1
Query: 101 RTHVGMYSNFCIFDEKISQLGQYWTYHIANNT 6
RTH+G +C +E ++L W +I N T
Sbjct: 241 RTHIGSLCKYCDENEAFTRLLDAWKNYIKNGT 272
>AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical
protein Y41C4A.5 protein.
Length = 373
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = +3
Query: 477 ANTLHINNINSNLTNGTSDHSNGSSEVLSEKADGQGETVNKVTNDVNSVQHNDTSNN 647
+N N NSN NG S + NG++ S +G N ++ N +N NN
Sbjct: 223 SNNSGSGNGNSNSGNGNSGNGNGNNAGNSGNGNGNSNGNNGNGSNGNGNGNNGNGNN 279
>AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical
protein Y66D12A.14 protein.
Length = 2870
Score = 27.5 bits (58), Expect = 9.6
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Frame = +3
Query: 414 KDLSQADELCIKSQEHLNETL--ANTLHINN-INSNLTNGTSDHSNGSSEVLSEKADGQG 584
K L+Q E + H +E + TL + + + D G + +SEKA G
Sbjct: 265 KTLAQIAEFLDGQEAHASEKALGSGTLGTGGLVEEPIRSSQEDAEEGKAHRISEKAHGTV 324
Query: 585 ETVNKVTN 608
ETV K N
Sbjct: 325 ETVGKPEN 332
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,880,466
Number of Sequences: 27780
Number of extensions: 261338
Number of successful extensions: 913
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 912
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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