Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1d13
(732 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U55766-1|AAB00557.1| 288|Homo sapiens Rev interacting protein R... 312 9e-85
BC033887-1|AAH33887.1| 381|Homo sapiens KRR1, small subunit (SS... 312 9e-85
BC005225-1|AAH05225.1| 362|Homo sapiens Unknown (protein for IM... 312 9e-85
BC026107-1|AAH26107.1| 381|Homo sapiens KRR1, small subunit (SS... 310 3e-84
BC016778-1|AAH16778.1| 381|Homo sapiens KRR1, small subunit (SS... 309 6e-84
EF010919-1|ABJ97679.1| 324|Homo sapiens HRB2 variant B protein. 290 3e-78
BC039263-1|AAH39263.1| 609|Homo sapiens GRID1 protein protein. 32 1.8
AL683834-1|CAI39587.1| 791|Homo sapiens glutamate receptor, ion... 32 1.8
AL596135-1|CAI39475.1| 791|Homo sapiens glutamate receptor, ion... 32 1.8
AB033046-1|BAA86534.1| 791|Homo sapiens KIAA1220 protein protein. 32 1.8
BC008827-1|AAH08827.1| 977|Homo sapiens zinc finger and SCAN do... 32 2.4
AL138837-3|CAI19594.1| 977|Homo sapiens zinc finger and SCAN do... 32 2.4
AL138837-2|CAM12881.1| 1043|Homo sapiens zinc finger and SCAN do... 32 2.4
AK131405-1|BAD18552.1| 1043|Homo sapiens protein ( Homo sapiens ... 32 2.4
DQ323998-1|ABC88600.1| 333|Homo sapiens QKI protein. 31 3.2
BC019917-1|AAH19917.1| 341|Homo sapiens quaking homolog, KH dom... 31 3.2
BC012222-1|AAH12222.1| 293|Homo sapiens QKI protein protein. 31 3.2
AY780788-1|AAV98358.1| 313|Homo sapiens quaking isoform protein. 31 3.2
AL356119-3|CAI23024.1| 325|Homo sapiens quaking homolog, KH dom... 31 3.2
AL356119-2|CAI23023.1| 319|Homo sapiens quaking homolog, KH dom... 31 3.2
AL356119-1|CAI23022.1| 341|Homo sapiens quaking homolog, KH dom... 31 3.2
AL031781-3|CAI21653.1| 325|Homo sapiens quaking homolog, KH dom... 31 3.2
AL031781-2|CAI21652.1| 319|Homo sapiens quaking homolog, KH dom... 31 3.2
AL031781-1|CAI21651.1| 341|Homo sapiens quaking homolog, KH dom... 31 3.2
AK027309-1|BAB55032.1| 323|Homo sapiens protein ( Homo sapiens ... 31 3.2
AF142422-1|AAF63417.1| 341|Homo sapiens QUAKING isoform 3 protein. 31 3.2
AF142421-1|AAF63416.1| 337|Homo sapiens QUAKING isoform 5 protein. 31 3.2
AF142420-1|AAF63415.1| 315|Homo sapiens QUAKING isoform 4 protein. 31 3.2
AF142419-1|AAF63414.1| 363|Homo sapiens QUAKING isoform 6 protein. 31 3.2
AF142418-1|AAF63413.1| 347|Homo sapiens QUAKING isoform 2 protein. 31 3.2
AF142417-1|AAF63412.1| 321|Homo sapiens QUAKING isoform 1 protein. 31 3.2
AB067808-1|BAB69681.1| 325|Homo sapiens RNA binding protein HQK... 31 3.2
AB067801-1|BAB69499.1| 319|Homo sapiens RNA binding protein HQK... 31 3.2
AB067800-1|BAB69498.1| 325|Homo sapiens RNA binding protein HQK... 31 3.2
AB067799-1|BAB69497.1| 319|Homo sapiens RNA binding protein HQK... 31 3.2
AB067798-1|BAB69496.1| 341|Homo sapiens RNA binding protein HQK... 31 3.2
BC068565-1|AAH68565.1| 644|Homo sapiens SULF1 protein protein. 31 5.6
AY101175-1|AAM76860.1| 871|Homo sapiens extracellular sulfatase... 31 5.6
AK074873-1|BAC11258.1| 540|Homo sapiens protein ( Homo sapiens ... 31 5.6
AF545571-1|AAO33315.1| 871|Homo sapiens sulfatase SULF1 precurs... 31 5.6
AB029000-1|BAA83029.1| 818|Homo sapiens KIAA1077 protein protein. 31 5.6
BC062318-1|AAH62318.1| 559|Homo sapiens LAMA1 protein protein. 30 9.8
BC039051-1|AAH39051.1| 747|Homo sapiens LAMA1 protein protein. 30 9.8
>U55766-1|AAB00557.1| 288|Homo sapiens Rev interacting protein
Rip-1 protein.
Length = 288
Score = 312 bits (766), Expect = 9e-85
Identities = 145/207 (70%), Positives = 173/207 (83%)
Frame = +1
Query: 109 NMEVEETNSVDNAWAMKIPKFTPDDNPHGLLEESKFATLFPKYREQYLKECWPLVQKILS 288
N + E +V + W K P F+ +DNP GLLEES FATLFPKYRE YLKECWPLVQK L+
Sbjct: 27 NQDESELLTVPDGW--KEPAFSKEDNPRGLLEESSFATLFPKYREAYLKECWPLVQKALN 84
Query: 289 EHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASRVLDDEIGCDI 468
EHH+ A LDLIEGS+TV TT+KT+DPYIII+ARD +KLL+RSV FEQA R+L D++ CDI
Sbjct: 85 EHHVNATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKLLARSVSFEQAVRILQDDVACDI 144
Query: 469 IKINSFVRKKETFLKRRQRLIGPQGVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRR 648
IKI S VR KE F+KRRQRLIGP+G TLK++ELLT CY++VQGNTVSA+GP+ GL +VR+
Sbjct: 145 IKIGSLVRNKERFVKRRQRLIGPKGSTLKALELLTNCYIMVQGNTVSAIGPFSGLKEVRK 204
Query: 649 IVEDTMKNIHPMYNIKSLMIKRELMKD 729
+V DTMKNIHP+YNIKSLMIKREL KD
Sbjct: 205 VVLDTMKNIHPIYNIKSLMIKRELAKD 231
>BC033887-1|AAH33887.1| 381|Homo sapiens KRR1, small subunit (SSU)
processome component, homolog (yeast) protein.
Length = 381
Score = 312 bits (766), Expect = 9e-85
Identities = 145/207 (70%), Positives = 173/207 (83%)
Frame = +1
Query: 109 NMEVEETNSVDNAWAMKIPKFTPDDNPHGLLEESKFATLFPKYREQYLKECWPLVQKILS 288
N + E +V + W K P F+ +DNP GLLEES FATLFPKYRE YLKECWPLVQK L+
Sbjct: 27 NQDESELLTVPDGW--KEPAFSKEDNPRGLLEESSFATLFPKYREAYLKECWPLVQKALN 84
Query: 289 EHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASRVLDDEIGCDI 468
EHH+ A LDLIEGS+TV TT+KT+DPYIII+ARD +KLL+RSV FEQA R+L D++ CDI
Sbjct: 85 EHHVNATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKLLARSVSFEQAVRILQDDVACDI 144
Query: 469 IKINSFVRKKETFLKRRQRLIGPQGVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRR 648
IKI S VR KE F+KRRQRLIGP+G TLK++ELLT CY++VQGNTVSA+GP+ GL +VR+
Sbjct: 145 IKIGSLVRNKERFVKRRQRLIGPKGSTLKALELLTNCYIMVQGNTVSAIGPFSGLKEVRK 204
Query: 649 IVEDTMKNIHPMYNIKSLMIKRELMKD 729
+V DTMKNIHP+YNIKSLMIKREL KD
Sbjct: 205 VVLDTMKNIHPIYNIKSLMIKRELAKD 231
>BC005225-1|AAH05225.1| 362|Homo sapiens Unknown (protein for
IMAGE:3685682) protein.
Length = 362
Score = 312 bits (766), Expect = 9e-85
Identities = 145/207 (70%), Positives = 173/207 (83%)
Frame = +1
Query: 109 NMEVEETNSVDNAWAMKIPKFTPDDNPHGLLEESKFATLFPKYREQYLKECWPLVQKILS 288
N + E +V + W K P F+ +DNP GLLEES FATLFPKYRE YLKECWPLVQK L+
Sbjct: 27 NQDESELLTVPDGW--KEPAFSKEDNPRGLLEESSFATLFPKYREAYLKECWPLVQKALN 84
Query: 289 EHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASRVLDDEIGCDI 468
EHH+ A LDLIEGS+TV TT+KT+DPYIII+ARD +KLL+RSV FEQA R+L D++ CDI
Sbjct: 85 EHHVNATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKLLARSVSFEQAVRILQDDVACDI 144
Query: 469 IKINSFVRKKETFLKRRQRLIGPQGVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRR 648
IKI S VR KE F+KRRQRLIGP+G TLK++ELLT CY++VQGNTVSA+GP+ GL +VR+
Sbjct: 145 IKIGSLVRNKERFVKRRQRLIGPKGSTLKALELLTNCYIMVQGNTVSAIGPFSGLKEVRK 204
Query: 649 IVEDTMKNIHPMYNIKSLMIKRELMKD 729
+V DTMKNIHP+YNIKSLMIKREL KD
Sbjct: 205 VVLDTMKNIHPIYNIKSLMIKRELAKD 231
>BC026107-1|AAH26107.1| 381|Homo sapiens KRR1, small subunit (SSU)
processome component, homolog (yeast) protein.
Length = 381
Score = 310 bits (762), Expect = 3e-84
Identities = 144/207 (69%), Positives = 172/207 (83%)
Frame = +1
Query: 109 NMEVEETNSVDNAWAMKIPKFTPDDNPHGLLEESKFATLFPKYREQYLKECWPLVQKILS 288
N + E +V + W K P F+ +DNP GLLEES FATLFPKYRE YLKECWPLVQK L+
Sbjct: 27 NQDESELLTVPDGW--KEPAFSKEDNPRGLLEESSFATLFPKYREAYLKECWPLVQKALN 84
Query: 289 EHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASRVLDDEIGCDI 468
EHH+ A LDLIEGS+TV TT+KT+DPYIII+ARD +KLL+RSV FEQA R+L D++ CDI
Sbjct: 85 EHHVNATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKLLARSVSFEQAVRILQDDVACDI 144
Query: 469 IKINSFVRKKETFLKRRQRLIGPQGVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRR 648
IKI S VR KE F+KRRQRLIGP+G TLK++ELLT CY++VQGNTVSA+GP+ GL +VR+
Sbjct: 145 IKIGSLVRNKERFVKRRQRLIGPKGSTLKALELLTNCYIMVQGNTVSAIGPFSGLKEVRK 204
Query: 649 IVEDTMKNIHPMYNIKSLMIKRELMKD 729
+ DTMKNIHP+YNIKSLMIKREL KD
Sbjct: 205 VALDTMKNIHPIYNIKSLMIKRELAKD 231
>BC016778-1|AAH16778.1| 381|Homo sapiens KRR1, small subunit (SSU)
processome component, homolog (yeast) protein.
Length = 381
Score = 309 bits (759), Expect = 6e-84
Identities = 144/207 (69%), Positives = 172/207 (83%)
Frame = +1
Query: 109 NMEVEETNSVDNAWAMKIPKFTPDDNPHGLLEESKFATLFPKYREQYLKECWPLVQKILS 288
N + E +V + W K P F+ +DNP GLLEES FATLFPKYR YLKECWPLVQK L+
Sbjct: 27 NQDESELLTVPDGW--KEPAFSKEDNPRGLLEESSFATLFPKYRGAYLKECWPLVQKALN 84
Query: 289 EHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASRVLDDEIGCDI 468
EHH+ A LDLIEGS+TV TT+KT+DPYIII+ARD +KLL+RSV FEQA R+L D++ CDI
Sbjct: 85 EHHVNATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKLLARSVSFEQAVRILQDDVACDI 144
Query: 469 IKINSFVRKKETFLKRRQRLIGPQGVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRR 648
IKI S VR KE F+KRRQRLIGP+G TLK++ELLT CY++VQGNTVSA+GP+ GL +VR+
Sbjct: 145 IKIGSLVRNKERFVKRRQRLIGPKGSTLKALELLTNCYIMVQGNTVSAIGPFSGLKEVRK 204
Query: 649 IVEDTMKNIHPMYNIKSLMIKRELMKD 729
+V DTMKNIHP+YNIKSLMIKREL KD
Sbjct: 205 VVLDTMKNIHPIYNIKSLMIKRELAKD 231
>EF010919-1|ABJ97679.1| 324|Homo sapiens HRB2 variant B protein.
Length = 324
Score = 290 bits (712), Expect = 3e-78
Identities = 133/196 (67%), Positives = 162/196 (82%)
Frame = +1
Query: 109 NMEVEETNSVDNAWAMKIPKFTPDDNPHGLLEESKFATLFPKYREQYLKECWPLVQKILS 288
N + E +V + W K P F+ +DNP GLLEES FATLFPKYRE YLKECWPLVQK L+
Sbjct: 27 NQDESELLTVPDGW--KEPAFSKEDNPRGLLEESSFATLFPKYREAYLKECWPLVQKALN 84
Query: 289 EHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASRVLDDEIGCDI 468
EHH+ A LDLIEGS+TV TT+KT+DPYIII+ARD +KLL+RSV FEQA R+L D++ CDI
Sbjct: 85 EHHVNATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKLLARSVSFEQAVRILQDDVACDI 144
Query: 469 IKINSFVRKKETFLKRRQRLIGPQGVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRR 648
IKI S VR KE F+KR QRL+GP+G TLK++ELLT CY++VQGNTVSA+GP+ GL +VR+
Sbjct: 145 IKIGSLVRNKERFVKRGQRLVGPKGSTLKALELLTNCYIMVQGNTVSAIGPFSGLKEVRK 204
Query: 649 IVEDTMKNIHPMYNIK 696
+V DTMKNIHP+YNIK
Sbjct: 205 VVLDTMKNIHPIYNIK 220
>BC039263-1|AAH39263.1| 609|Homo sapiens GRID1 protein protein.
Length = 609
Score = 32.3 bits (70), Expect = 1.8
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +1
Query: 415 VPFEQASRVLDDEIGCDIIKINSFVRKKETFLKRRQRLIGP--QGVTLKSIELLTECYVL 588
V FE + G D+ K+ ++ +K ++R +G QG+TLK + +L E +V+
Sbjct: 392 VQFEILGTTYSETFGKDMRKLATWDSEKGLNGSLQERPMGSRLQGLTLKVVTVLEEPFVM 451
Query: 589 VQGNTVSAVGPYKG 630
V N + YKG
Sbjct: 452 VAENILGQPKRYKG 465
>AL683834-1|CAI39587.1| 791|Homo sapiens glutamate receptor,
ionotropic, delta 1 protein.
Length = 791
Score = 32.3 bits (70), Expect = 1.8
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +1
Query: 415 VPFEQASRVLDDEIGCDIIKINSFVRKKETFLKRRQRLIGP--QGVTLKSIELLTECYVL 588
V FE + G D+ K+ ++ +K ++R +G QG+TLK + +L E +V+
Sbjct: 174 VQFEILGTTYSETFGKDMRKLATWDSEKGLNGSLQERPMGSRLQGLTLKVVTVLEEPFVM 233
Query: 589 VQGNTVSAVGPYKG 630
V N + YKG
Sbjct: 234 VAENILGQPKRYKG 247
>AL596135-1|CAI39475.1| 791|Homo sapiens glutamate receptor,
ionotropic, delta 1 protein.
Length = 791
Score = 32.3 bits (70), Expect = 1.8
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +1
Query: 415 VPFEQASRVLDDEIGCDIIKINSFVRKKETFLKRRQRLIGP--QGVTLKSIELLTECYVL 588
V FE + G D+ K+ ++ +K ++R +G QG+TLK + +L E +V+
Sbjct: 174 VQFEILGTTYSETFGKDMRKLATWDSEKGLNGSLQERPMGSRLQGLTLKVVTVLEEPFVM 233
Query: 589 VQGNTVSAVGPYKG 630
V N + YKG
Sbjct: 234 VAENILGQPKRYKG 247
>AB033046-1|BAA86534.1| 791|Homo sapiens KIAA1220 protein protein.
Length = 791
Score = 32.3 bits (70), Expect = 1.8
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +1
Query: 415 VPFEQASRVLDDEIGCDIIKINSFVRKKETFLKRRQRLIGP--QGVTLKSIELLTECYVL 588
V FE + G D+ K+ ++ +K ++R +G QG+TLK + +L E +V+
Sbjct: 174 VQFEILGTTYSETFGKDMRKLATWDSEKGLNGSLQERPMGSRLQGLTLKVVTVLEEPFVM 233
Query: 589 VQGNTVSAVGPYKG 630
V N + YKG
Sbjct: 234 VAENILGQPKRYKG 247
>BC008827-1|AAH08827.1| 977|Homo sapiens zinc finger and SCAN
domain containing 20 protein.
Length = 977
Score = 31.9 bits (69), Expect = 2.4
Identities = 25/58 (43%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +3
Query: 150 GYEDTQIYTRR*PAWPFRRK*IR--HIISKVSRAIPERMLALGTENT*RTSHCCRIRF 317
GYE+T+ + PF K +R H S+V RAI ER+ ALG RT CR RF
Sbjct: 421 GYEETKAFLAILSESPFSEK-LRTCHQNSQVYRAIAERLCALGFL---RTLEQCRYRF 474
>AL138837-3|CAI19594.1| 977|Homo sapiens zinc finger and SCAN
domain containing 20 protein.
Length = 977
Score = 31.9 bits (69), Expect = 2.4
Identities = 25/58 (43%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +3
Query: 150 GYEDTQIYTRR*PAWPFRRK*IR--HIISKVSRAIPERMLALGTENT*RTSHCCRIRF 317
GYE+T+ + PF K +R H S+V RAI ER+ ALG RT CR RF
Sbjct: 421 GYEETKAFLAILSESPFSEK-LRTCHQNSQVYRAIAERLCALGFL---RTLEQCRYRF 474
>AL138837-2|CAM12881.1| 1043|Homo sapiens zinc finger and SCAN
domain containing 20 protein.
Length = 1043
Score = 31.9 bits (69), Expect = 2.4
Identities = 25/58 (43%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +3
Query: 150 GYEDTQIYTRR*PAWPFRRK*IR--HIISKVSRAIPERMLALGTENT*RTSHCCRIRF 317
GYE+T+ + PF K +R H S+V RAI ER+ ALG RT CR RF
Sbjct: 487 GYEETKAFLAILSESPFSEK-LRTCHQNSQVYRAIAERLCALGFL---RTLEQCRYRF 540
>AK131405-1|BAD18552.1| 1043|Homo sapiens protein ( Homo sapiens
cDNA FLJ16509 fis, clone HCHON2004858, moderately
similar to Zinc finger protein 29. ).
Length = 1043
Score = 31.9 bits (69), Expect = 2.4
Identities = 25/58 (43%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +3
Query: 150 GYEDTQIYTRR*PAWPFRRK*IR--HIISKVSRAIPERMLALGTENT*RTSHCCRIRF 317
GYE+T+ + PF K +R H S+V RAI ER+ ALG RT CR RF
Sbjct: 487 GYEETKAFLAILSESPFSEK-LRTCHQNSQVYRAIAERLCALGFL---RTLEQCRYRF 540
>DQ323998-1|ABC88600.1| 333|Homo sapiens QKI protein.
Length = 333
Score = 31.5 bits (68), Expect = 3.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +1
Query: 523 RLIGPQGVTLKSIELLTECYVLVQG 597
R++GP+G+T K +E T C ++V+G
Sbjct: 101 RILGPRGLTAKQLEAETGCKIMVRG 125
>BC019917-1|AAH19917.1| 341|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 341
Score = 31.5 bits (68), Expect = 3.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +1
Query: 523 RLIGPQGVTLKSIELLTECYVLVQG 597
R++GP+G+T K +E T C ++V+G
Sbjct: 101 RILGPRGLTAKQLEAETGCKIMVRG 125
>BC012222-1|AAH12222.1| 293|Homo sapiens QKI protein protein.
Length = 293
Score = 31.5 bits (68), Expect = 3.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +1
Query: 523 RLIGPQGVTLKSIELLTECYVLVQG 597
R++GP+G+T K +E T C ++V+G
Sbjct: 53 RILGPRGLTAKQLEAETGCKIMVRG 77
>AY780788-1|AAV98358.1| 313|Homo sapiens quaking isoform protein.
Length = 313
Score = 31.5 bits (68), Expect = 3.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +1
Query: 523 RLIGPQGVTLKSIELLTECYVLVQG 597
R++GP+G+T K +E T C ++V+G
Sbjct: 97 RILGPRGLTAKQLEAETGCKIMVRG 121
>AL356119-3|CAI23024.1| 325|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 325
Score = 31.5 bits (68), Expect = 3.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +1
Query: 523 RLIGPQGVTLKSIELLTECYVLVQG 597
R++GP+G+T K +E T C ++V+G
Sbjct: 101 RILGPRGLTAKQLEAETGCKIMVRG 125
>AL356119-2|CAI23023.1| 319|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 319
Score = 31.5 bits (68), Expect = 3.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +1
Query: 523 RLIGPQGVTLKSIELLTECYVLVQG 597
R++GP+G+T K +E T C ++V+G
Sbjct: 101 RILGPRGLTAKQLEAETGCKIMVRG 125
>AL356119-1|CAI23022.1| 341|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 341
Score = 31.5 bits (68), Expect = 3.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +1
Query: 523 RLIGPQGVTLKSIELLTECYVLVQG 597
R++GP+G+T K +E T C ++V+G
Sbjct: 101 RILGPRGLTAKQLEAETGCKIMVRG 125
>AL031781-3|CAI21653.1| 325|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 325
Score = 31.5 bits (68), Expect = 3.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +1
Query: 523 RLIGPQGVTLKSIELLTECYVLVQG 597
R++GP+G+T K +E T C ++V+G
Sbjct: 101 RILGPRGLTAKQLEAETGCKIMVRG 125
>AL031781-2|CAI21652.1| 319|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 319
Score = 31.5 bits (68), Expect = 3.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +1
Query: 523 RLIGPQGVTLKSIELLTECYVLVQG 597
R++GP+G+T K +E T C ++V+G
Sbjct: 101 RILGPRGLTAKQLEAETGCKIMVRG 125
>AL031781-1|CAI21651.1| 341|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 341
Score = 31.5 bits (68), Expect = 3.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +1
Query: 523 RLIGPQGVTLKSIELLTECYVLVQG 597
R++GP+G+T K +E T C ++V+G
Sbjct: 101 RILGPRGLTAKQLEAETGCKIMVRG 125
>AK027309-1|BAB55032.1| 323|Homo sapiens protein ( Homo sapiens
cDNA FLJ14403 fis, clone HEMBA1003805, highly similar to
Mus musculus KH domain RNA binding protein QKI-5A mRNA.
).
Length = 323
Score = 31.5 bits (68), Expect = 3.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +1
Query: 523 RLIGPQGVTLKSIELLTECYVLVQG 597
R++GP+G+T K +E T C ++V+G
Sbjct: 83 RILGPRGLTAKQLEAETGCKIMVRG 107
>AF142422-1|AAF63417.1| 341|Homo sapiens QUAKING isoform 3 protein.
Length = 341
Score = 31.5 bits (68), Expect = 3.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +1
Query: 523 RLIGPQGVTLKSIELLTECYVLVQG 597
R++GP+G+T K +E T C ++V+G
Sbjct: 123 RILGPRGLTAKQLEAETGCKIMVRG 147
>AF142421-1|AAF63416.1| 337|Homo sapiens QUAKING isoform 5 protein.
Length = 337
Score = 31.5 bits (68), Expect = 3.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +1
Query: 523 RLIGPQGVTLKSIELLTECYVLVQG 597
R++GP+G+T K +E T C ++V+G
Sbjct: 97 RILGPRGLTAKQLEAETGCKIMVRG 121
>AF142420-1|AAF63415.1| 315|Homo sapiens QUAKING isoform 4 protein.
Length = 315
Score = 31.5 bits (68), Expect = 3.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +1
Query: 523 RLIGPQGVTLKSIELLTECYVLVQG 597
R++GP+G+T K +E T C ++V+G
Sbjct: 97 RILGPRGLTAKQLEAETGCKIMVRG 121
>AF142419-1|AAF63414.1| 363|Homo sapiens QUAKING isoform 6 protein.
Length = 363
Score = 31.5 bits (68), Expect = 3.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +1
Query: 523 RLIGPQGVTLKSIELLTECYVLVQG 597
R++GP+G+T K +E T C ++V+G
Sbjct: 123 RILGPRGLTAKQLEAETGCKIMVRG 147
>AF142418-1|AAF63413.1| 347|Homo sapiens QUAKING isoform 2 protein.
Length = 347
Score = 31.5 bits (68), Expect = 3.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +1
Query: 523 RLIGPQGVTLKSIELLTECYVLVQG 597
R++GP+G+T K +E T C ++V+G
Sbjct: 123 RILGPRGLTAKQLEAETGCKIMVRG 147
>AF142417-1|AAF63412.1| 321|Homo sapiens QUAKING isoform 1 protein.
Length = 321
Score = 31.5 bits (68), Expect = 3.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +1
Query: 523 RLIGPQGVTLKSIELLTECYVLVQG 597
R++GP+G+T K +E T C ++V+G
Sbjct: 97 RILGPRGLTAKQLEAETGCKIMVRG 121
>AB067808-1|BAB69681.1| 325|Homo sapiens RNA binding protein HQK
protein.
Length = 325
Score = 31.5 bits (68), Expect = 3.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +1
Query: 523 RLIGPQGVTLKSIELLTECYVLVQG 597
R++GP+G+T K +E T C ++V+G
Sbjct: 101 RILGPRGLTAKQLEAETGCKIMVRG 125
>AB067801-1|BAB69499.1| 319|Homo sapiens RNA binding protein HQK-7B
protein.
Length = 319
Score = 31.5 bits (68), Expect = 3.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +1
Query: 523 RLIGPQGVTLKSIELLTECYVLVQG 597
R++GP+G+T K +E T C ++V+G
Sbjct: 101 RILGPRGLTAKQLEAETGCKIMVRG 125
>AB067800-1|BAB69498.1| 325|Homo sapiens RNA binding protein HQK-7
protein.
Length = 325
Score = 31.5 bits (68), Expect = 3.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +1
Query: 523 RLIGPQGVTLKSIELLTECYVLVQG 597
R++GP+G+T K +E T C ++V+G
Sbjct: 101 RILGPRGLTAKQLEAETGCKIMVRG 125
>AB067799-1|BAB69497.1| 319|Homo sapiens RNA binding protein HQK-6
protein.
Length = 319
Score = 31.5 bits (68), Expect = 3.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +1
Query: 523 RLIGPQGVTLKSIELLTECYVLVQG 597
R++GP+G+T K +E T C ++V+G
Sbjct: 101 RILGPRGLTAKQLEAETGCKIMVRG 125
>AB067798-1|BAB69496.1| 341|Homo sapiens RNA binding protein HQK-5
protein.
Length = 341
Score = 31.5 bits (68), Expect = 3.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +1
Query: 523 RLIGPQGVTLKSIELLTECYVLVQG 597
R++GP+G+T K +E T C ++V+G
Sbjct: 101 RILGPRGLTAKQLEAETGCKIMVRG 125
>BC068565-1|AAH68565.1| 644|Homo sapiens SULF1 protein protein.
Length = 644
Score = 30.7 bits (66), Expect = 5.6
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +1
Query: 397 KLLSRSVPFEQASRVLDDEIGCDIIKINSFVRKKETFLKRRQR 525
KL S PF++A++ +D ++ + K N+ RKKE KRRQR
Sbjct: 453 KLKSHLHPFKEAAQEVDSKL--QLFKENNRRRKKERKEKRRQR 493
>AY101175-1|AAM76860.1| 871|Homo sapiens extracellular sulfatase
SULF-1 protein.
Length = 871
Score = 30.7 bits (66), Expect = 5.6
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +1
Query: 397 KLLSRSVPFEQASRVLDDEIGCDIIKINSFVRKKETFLKRRQR 525
KL S PF++A++ +D ++ + K N+ RKKE KRRQR
Sbjct: 694 KLKSHLHPFKEAAQEVDSKL--QLFKENNRRRKKERKEKRRQR 734
>AK074873-1|BAC11258.1| 540|Homo sapiens protein ( Homo sapiens
cDNA FLJ90392 fis, clone NT2RP2005541, weakly similar to
N-ACETYLGLUCOSAMINE-6-SULFATASE PRECURSOR (EC 3.1.6.14).
).
Length = 540
Score = 30.7 bits (66), Expect = 5.6
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +1
Query: 397 KLLSRSVPFEQASRVLDDEIGCDIIKINSFVRKKETFLKRRQR 525
KL S PF++A++ +D ++ + K N+ RKKE KRRQR
Sbjct: 363 KLKSHLHPFKEAAQEVDSKL--QLFKENNRRRKKERREKRRQR 403
>AF545571-1|AAO33315.1| 871|Homo sapiens sulfatase SULF1 precursor
protein.
Length = 871
Score = 30.7 bits (66), Expect = 5.6
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +1
Query: 397 KLLSRSVPFEQASRVLDDEIGCDIIKINSFVRKKETFLKRRQR 525
KL S PF++A++ +D ++ + K N+ RKKE KRRQR
Sbjct: 694 KLKSHLHPFKEAAQEVDSKL--QLFKENNRRRKKERKEKRRQR 734
>AB029000-1|BAA83029.1| 818|Homo sapiens KIAA1077 protein protein.
Length = 818
Score = 30.7 bits (66), Expect = 5.6
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +1
Query: 397 KLLSRSVPFEQASRVLDDEIGCDIIKINSFVRKKETFLKRRQR 525
KL S PF++A++ +D ++ + K N+ RKKE KRRQR
Sbjct: 641 KLKSHLHPFKEAAQEVDSKL--QLFKENNRRRKKERKEKRRQR 681
>BC062318-1|AAH62318.1| 559|Homo sapiens LAMA1 protein protein.
Length = 559
Score = 29.9 bits (64), Expect = 9.8
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = +1
Query: 22 VPNSK*ISLLNL---FNKKIISLLATLNLIKTNMEV-EETNSVDNAWAMKIPKFTPDDNP 189
+P + SLL + F+ I +L+ L L+ N V E +D W + PK PD
Sbjct: 112 IPEGEGTSLLTMRRSFHGCIKNLIFNLELLDFNSAVGHEQVDLDTCWLSERPKLAPDAED 171
Query: 190 HGLLEESK 213
LL E +
Sbjct: 172 SKLLPEPR 179
>BC039051-1|AAH39051.1| 747|Homo sapiens LAMA1 protein protein.
Length = 747
Score = 29.9 bits (64), Expect = 9.8
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = +1
Query: 22 VPNSK*ISLLNL---FNKKIISLLATLNLIKTNMEV-EETNSVDNAWAMKIPKFTPDDNP 189
+P + SLL + F+ I +L+ L L+ N V E +D W + PK PD
Sbjct: 300 IPEGEGTSLLTMRRSFHGCIKNLIFNLELLDFNSAVGHEQVDLDTCWLSERPKLAPDAED 359
Query: 190 HGLLEESK 213
LL E +
Sbjct: 360 SKLLPEPR 367
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,889,423
Number of Sequences: 237096
Number of extensions: 1706460
Number of successful extensions: 3279
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 3203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3279
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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