Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1d10
         (525 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF460613-1|AAM87984.1|   66|Homo sapiens immunoglobulin heavy ch...    32   1.4  
AF460601-1|AAM87972.1|   66|Homo sapiens immunoglobulin heavy ch...    32   1.4  
AF460369-1|AAM83384.1|   66|Homo sapiens immunoglobulin heavy ch...    30   4.3  
AF471314-1|AAQ05489.1|  123|Homo sapiens Ig heavy chain variable...    30   5.7  
DQ065632-1|ABA00044.1|  123|Homo sapiens immunoglobulin epsilon ...    29   10.0 
AF167610-1|AAF15443.1|   80|Homo sapiens immunoglobulin heavy ch...    29   10.0 

>AF460613-1|AAM87984.1|   66|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 66

 Score = 31.9 bits (69), Expect = 1.4
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -3

Query: 289 LRVEDAIIYYLVNKFFVYNHQYFGLQPPGQ 200
           LR ED  +YY    F  YN  Y+G+   GQ
Sbjct: 37  LRAEDTAVYYCAKDFDPYNWNYYGMDVWGQ 66


>AF460601-1|AAM87972.1|   66|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 66

 Score = 31.9 bits (69), Expect = 1.4
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -3

Query: 289 LRVEDAIIYYLVNKFFVYNHQYFGLQPPGQ 200
           LR ED  +YY    F  YN  Y+G+   GQ
Sbjct: 37  LRAEDTAVYYCAKDFDPYNWNYYGMDVWGQ 66


>AF460369-1|AAM83384.1|   66|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 66

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 289 LRVEDAIIYYLVNKFFVYNHQYFGLQPPGQ 200
           LR ED  +YY     +VY + Y+G+   GQ
Sbjct: 37  LRAEDTAVYYCARANWVYYYYYYGMDVWGQ 66


>AF471314-1|AAQ05489.1|  123|Homo sapiens Ig heavy chain variable
           region, VH3 family protein.
          Length = 123

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 289 LRVEDAIIYYLVNKFFVYNHQYFGLQPPGQ 200
           LR ED  +YY     F Y++ Y+G+   GQ
Sbjct: 86  LRGEDTAVYYCAKDSFGYSNSYYGMDVWGQ 115


>DQ065632-1|ABA00044.1|  123|Homo sapiens immunoglobulin epsilon
           heavy chain variable region protein.
          Length = 123

 Score = 29.1 bits (62), Expect = 10.0
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -3

Query: 289 LRVEDAIIYYLVNKFFVYNHQYFGLQPPGQ 200
           LR ED  +YY       + H Y+G+   GQ
Sbjct: 86  LRAEDTAVYYCAKHSLRFGHYYYGMDVWGQ 115


>AF167610-1|AAF15443.1|   80|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 80

 Score = 29.1 bits (62), Expect = 10.0
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -3

Query: 289 LRVEDAIIYYLVNKFFVYNHQYFGLQPPGQ 200
           LR ED  +YY   +    N+ Y+G+   GQ
Sbjct: 51  LRAEDTAVYYCAKEMATSNYYYYGMDVWGQ 80


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,211,130
Number of Sequences: 237096
Number of extensions: 1025493
Number of successful extensions: 5927
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5919
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5927
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5046825278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)