Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1d02
(703 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0192 + 1432888-1433112,1433436-1433582,1433855-1433950,143... 34 0.13
11_06_0595 - 25368114-25370051 30 2.0
04_04_0356 - 24658223-24660613 30 2.0
09_04_0188 - 15410310-15410514,15410597-15410748,15410845-154110... 29 2.7
11_04_0166 + 14317129-14317962,14318042-14318809,14319008-143197... 29 3.6
07_03_0375 + 17408815-17409035,17422820-17423477,17423780-174241... 29 3.6
01_06_1476 + 37640278-37642551 29 3.6
12_01_0489 + 3872495-3872538,3872663-3872741,3872835-3872914,387... 29 4.7
11_03_0063 + 9515666-9516656,9517503-9518599 29 4.7
09_01_0073 - 1057560-1058043,1058199-1058385,1058754-1059062,105... 29 4.7
08_02_0838 - 21662721-21662759,21672016-21673355,21673566-21674505 29 4.7
07_01_1124 + 10392909-10392974,10393037-10393455,10393503-103936... 29 4.7
07_01_0389 - 2915191-2915604,2915696-2915752,2915867-2915922,291... 29 4.7
02_02_0305 + 8786599-8787184,8788613-8790001,8790370-8791196 29 4.7
12_02_0054 - 12943867-12944283 28 6.2
04_03_0646 + 18363847-18364858,18365501-18365578,18366161-18366798 28 6.2
04_01_0196 + 2287911-2288278,2289187-2289838 28 6.2
04_01_0131 - 1433821-1434564,1435509-1435751 28 6.2
09_04_0185 - 15396119-15396317,15396781-15396821,15396932-153970... 28 8.3
08_02_1186 + 25027498-25029854,25029953-25030564,25031742-250318... 28 8.3
04_01_0238 - 3095098-3095466,3097496-3097526,3098082-3098527 28 8.3
>12_01_0192 +
1432888-1433112,1433436-1433582,1433855-1433950,
1435150-1435182
Length = 166
Score = 33.9 bits (74), Expect = 0.13
Identities = 21/59 (35%), Positives = 25/59 (42%)
Frame = +3
Query: 522 LREQWLVRTDGALAHRLQDREISSHLCENRYRNQQIREDFPVAVNEQKDLEHEARLREY 698
LR +V D AL H L+ R LC R + R+D P V LE EA Y
Sbjct: 53 LRAGSMVGADAALLHELESRAAVVSLCRLRALGSKNRDDDPDGVASTSSLEDEAVHNHY 111
>11_06_0595 - 25368114-25370051
Length = 645
Score = 29.9 bits (64), Expect = 2.0
Identities = 9/31 (29%), Positives = 21/31 (67%)
Frame = -2
Query: 192 QTMETENYLSMITFELMYPPSLTQLLYYILC 100
+ ++ E +++FEL++PPS ++ ++LC
Sbjct: 256 EALQNEVVQCLVSFELIFPPSFFNIMTHLLC 286
>04_04_0356 - 24658223-24660613
Length = 796
Score = 29.9 bits (64), Expect = 2.0
Identities = 9/31 (29%), Positives = 21/31 (67%)
Frame = -2
Query: 192 QTMETENYLSMITFELMYPPSLTQLLYYILC 100
+ ++ E +++FEL++PPS ++ ++LC
Sbjct: 712 EALQNEVVQCLVSFELIFPPSFFNIMTHLLC 742
>09_04_0188 -
15410310-15410514,15410597-15410748,15410845-15411003,
15411062-15411367,15412508-15412535,15413174-15413290,
15413649-15413717,15413919-15414103
Length = 406
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = -1
Query: 406 WSCISSTLHEFV-VNTTIPDVNSWTMTAL 323
W C STL V V+ +PD+N+W + +L
Sbjct: 251 WMCFLSTLQSAVLVSFLVPDINAWKIHSL 279
>11_04_0166 +
14317129-14317962,14318042-14318809,14319008-14319740,
14353399-14353892,14353971-14354417,14354505-14355110,
14355204-14355391,14355470-14355640,14355723-14355810
Length = 1442
Score = 29.1 bits (62), Expect = 3.6
Identities = 8/31 (25%), Positives = 21/31 (67%)
Frame = -2
Query: 192 QTMETENYLSMITFELMYPPSLTQLLYYILC 100
+ ++ + +++FEL++PPS ++ ++LC
Sbjct: 543 EALQNDVVQCLVSFELIFPPSFFNIMMHLLC 573
>07_03_0375 +
17408815-17409035,17422820-17423477,17423780-17424161,
17424236-17424550,17424727-17425118,17432479-17432508
Length = 665
Score = 29.1 bits (62), Expect = 3.6
Identities = 9/31 (29%), Positives = 20/31 (64%)
Frame = -2
Query: 192 QTMETENYLSMITFELMYPPSLTQLLYYILC 100
+ ++ + +I FEL++PPS ++ ++LC
Sbjct: 561 EALQNDVVQCLINFELIFPPSFFNIMMHLLC 591
>01_06_1476 + 37640278-37642551
Length = 757
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +1
Query: 505 SDT*RICANSGLCAPTERLLIVCKTARYLLTSARIGIEINRSAKIFLSPST 657
+DT C +S A + ++VC LL R E SA IF+S +T
Sbjct: 385 NDTISACNSSTSLATLAQSIVVCYDTGILLDQMRTAAEAGVSAAIFISNTT 435
>12_01_0489 +
3872495-3872538,3872663-3872741,3872835-3872914,
3873888-3874007,3874090-3874159,3874238-3874311,
3874393-3874513,3874600-3874662,3874748-3874807,
3875156-3875281,3875358-3875441,3875912-3876010
Length = 339
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -1
Query: 301 YTLTTR*YVFVCRYVSRLSERFVSSVGTF*FLSVN*SNNGNRKLSI 164
Y+ TR + F+C Y+SR+ E S F F ++ NR L I
Sbjct: 141 YSKVTR-FFFICNYISRIIEPLASRCAKFRFKPLSEEVMSNRILHI 185
>11_03_0063 + 9515666-9516656,9517503-9518599
Length = 695
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -3
Query: 536 PLFAQIRYVSELR-HSIACLKPCHRSCATLESRDFPQRLSLSENVELH*QHVTRIRC 369
P + Y+SE+R A +KP + LES + LSEN++++ + I C
Sbjct: 461 PYQNNVPYISEVRKRGGARIKPDNLEALNLESEERINEYELSENIDIYYISNSNIEC 517
>09_01_0073 -
1057560-1058043,1058199-1058385,1058754-1059062,
1059427-1060269,1061572-1062552,1063189-1063516
Length = 1043
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -3
Query: 536 PLFAQIRYVSELR-HSIACLKPCHRSCATLESRDFPQRLSLSENVELH*QHVTRIRC 369
P + Y+SE+R A +KP + LES + LSEN++++ + I C
Sbjct: 518 PYQNNVPYISEVRKRGGARIKPDNLEALNLESEERINEYELSENIDIYYISNSNIEC 574
>08_02_0838 - 21662721-21662759,21672016-21673355,21673566-21674505
Length = 772
Score = 28.7 bits (61), Expect = 4.7
Identities = 9/31 (29%), Positives = 20/31 (64%)
Frame = -2
Query: 192 QTMETENYLSMITFELMYPPSLTQLLYYILC 100
+ ++ E ++ FEL++PPS ++ ++LC
Sbjct: 642 EALQNEVVQCLVGFELIFPPSFFNIMTHLLC 672
>07_01_1124 +
10392909-10392974,10393037-10393455,10393503-10393657,
10393792-10394247,10394379-10395298
Length = 671
Score = 28.7 bits (61), Expect = 4.7
Identities = 8/31 (25%), Positives = 21/31 (67%)
Frame = -2
Query: 192 QTMETENYLSMITFELMYPPSLTQLLYYILC 100
+ ++ + +++FEL++PPS ++ ++LC
Sbjct: 498 EALQNDVLQCLVSFELIFPPSFFNIMTHLLC 528
>07_01_0389 -
2915191-2915604,2915696-2915752,2915867-2915922,
2916053-2916113,2916243-2916365,2916505-2916537,
2916617-2916709,2916839-2916934,2917025-2917203,
2917344-2917530,2918051-2918184,2918311-2918518,
2918598-2918633,2918785-2919241,2919633-2919736,
2920489-2920569,2920646-2920697,2920837-2920876,
2920991-2921085,2921241-2921383,2921899-2922006,
2922120-2922221,2922302-2922348,2922425-2922554,
2923173-2923304,2923404-2923616,2923709-2923963,
2924053-2924799
Length = 1460
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = -1
Query: 556 APSVRTSHCSRRSVTCP-NFGIVSLA*NPAIVRAQR*KVETFHNVCL 419
+PS S + P FGIV L PA + QR K T H CL
Sbjct: 849 SPSGMMSRVTEHETNNPCKFGIVDLMAAPAQLDMQRFKFRTLHATCL 895
>02_02_0305 + 8786599-8787184,8788613-8790001,8790370-8791196
Length = 933
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -3
Query: 536 PLFAQIRYVSELR-HSIACLKPCHRSCATLESRDFPQRLSLSENVELH*QHVTRIRC 369
P + Y+SE+R A +KP + LES + LSEN++++ + I C
Sbjct: 235 PYQNNVPYISEVRKRGGARIKPNNLEALNLESEERINEYELSENIDIYYISNSNIEC 291
>12_02_0054 - 12943867-12944283
Length = 138
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +1
Query: 490 ILCRSSDT*RICANSGLCAPTERLLIVCKTARYLLTSARIGIEINRSAKI 639
+L ++S R C+ G+ RL +VC+ A + AR+G+ ++R A++
Sbjct: 5 LLPQTSGVFRRCSRLGVVRRRARLGVVCRRALLGVVEARLGV-VHRRARL 53
>04_03_0646 + 18363847-18364858,18365501-18365578,18366161-18366798
Length = 575
Score = 28.3 bits (60), Expect = 6.2
Identities = 28/119 (23%), Positives = 55/119 (46%), Gaps = 8/119 (6%)
Frame = -3
Query: 701 RIFTQTSFVLEVFLFVDGDRKIFADL------LISIPILAEVRRYLAVLQTMSKRSVG-A 543
+I Q ++ +EV+ ++G + I ++ +IS ++ +R +QT +G
Sbjct: 385 KIHNQLAYNVEVY--INGTKYIIDEITIRNLSMISDDMIIGLRFLQQSVQTTVIHELGIT 442
Query: 542 HKPLFAQIRYVSELR-HSIACLKPCHRSCATLESRDFPQRLSLSENVELH*QHVTRIRC 369
P + Y+SE+R A +KP + LE + LSEN++++ + I C
Sbjct: 443 FIPYQNNVPYISEVRKRGGARIKPDNLEALNLECEERINEYELSENIDIYYISNSNIEC 501
>04_01_0196 + 2287911-2288278,2289187-2289838
Length = 339
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -3
Query: 605 LAEVRRYLAVLQTMSKRSVGAHKPLFAQIRYVSELRH 495
L E+ R +AV + + + +VG HK F ++ +SE RH
Sbjct: 25 LQELGRDVAVKKIVKELNVG-HKDFFTEVTTISEARH 60
>04_01_0131 - 1433821-1434564,1435509-1435751
Length = 328
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -3
Query: 605 LAEVRRYLAVLQTMSKRSVGAHKPLFAQIRYVSELRH 495
L E+ R +AV + + + +VG HK F ++ +SE RH
Sbjct: 25 LQELGRDVAVKKIVKELNVG-HKDFFTEVTTISEARH 60
>09_04_0185 -
15396119-15396317,15396781-15396821,15396932-15397090,
15397320-15397517
Length = 198
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -1
Query: 406 WSCISSTLHEFVVNT-TIPDVNSWTMTALVSASNIAY 299
W+C STL + +PD N+W + +L S+ A+
Sbjct: 82 WTCFFSTLQCAALAVFLVPDANAWKIHSLFELSSYAF 118
>08_02_1186 +
25027498-25029854,25029953-25030564,25031742-25031847,
25032669-25033199
Length = 1201
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -1
Query: 172 LSIDD-YFRINVSTITNAAFILYSLLKTVHVYFVITLSSNASIFSKT 35
L++D YFR+ V A + SLL T++ Y+ +S +S+ S +
Sbjct: 662 LAVDHKYFRLQVHACIVDARLARSLLATINYYYYFNISITSSMASSS 708
>04_01_0238 - 3095098-3095466,3097496-3097526,3098082-3098527
Length = 281
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 605 LAEVRRYLAVLQTMSKRSVGAHKPLFAQIRYVSELRH 495
L + R +AV + K S HK FA++ +SE +H
Sbjct: 50 LKRLNREVAVKKIFRKPSGENHKDFFAEVSIISEAKH 86
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,705,906
Number of Sequences: 37544
Number of extensions: 350746
Number of successful extensions: 845
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 845
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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