Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1d01
         (730 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    23   2.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.3  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   4.4  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   7.7  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 648 IFVFLPEIFLEPVEFLVLAYGCD 580
           ++  L   FL+ +E L LAY CD
Sbjct: 267 VYFTLQWAFLQILEILALAYLCD 289


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = -3

Query: 698 CHSFQVFRSH*TGDLFVFLFFCPRYFLNLLSFLC 597
           C +F +F  H    L ++ F+C    L  + + C
Sbjct: 269 CCAFIIFTMHLLFLLCIYYFYCALIILLCIYYFC 302


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/39 (25%), Positives = 16/39 (41%)
 Frame = -3

Query: 689 FQVFRSH*TGDLFVFLFFCPRYFLNLLSFLCLHTAAMFQ 573
           +  F  H    + +    C +   ++  FLC HT   FQ
Sbjct: 118 YAFFGVHLAYGVVIIYSICVQTEKSVFDFLCRHTVEYFQ 156


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +3

Query: 384  VMAHQGQRLVRFPPDFAECARHAEETIR 467
            + A+  + +   PPD A C     +TIR
Sbjct: 1091 IKAYTAEGVPEQPPDKATCTTLTAQTIR 1118


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,887
Number of Sequences: 336
Number of extensions: 3249
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)