Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1d01
         (730 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41533-7|AAA83170.1|  337|Caenorhabditis elegans Small glutamine...    34   0.12 
AF125964-5|AAP13765.1|  722|Caenorhabditis elegans Hypothetical ...    32   0.48 
AF125964-2|AAD14754.1|  726|Caenorhabditis elegans Hypothetical ...    32   0.48 
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso...    32   0.48 
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso...    32   0.48 
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso...    32   0.48 
Z68159-8|CAD01080.1|  310|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z93395-2|CAB07705.1|  905|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z83112-5|CAB05541.1|  905|Caenorhabditis elegans Hypothetical pr...    29   4.5  
AL110485-7|CAB60355.1|  237|Caenorhabditis elegans Hypothetical ...    29   4.5  
AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical...    28   5.9  
U53147-5|AAA96116.1|  153|Caenorhabditis elegans Hypothetical pr...    28   7.9  
AF016683-8|AAM97998.1|  480|Caenorhabditis elegans Hypothetical ...    28   7.9  

>U41533-7|AAA83170.1|  337|Caenorhabditis elegans Small
           glutamine-rich tetratricorepeat protein protein 1
           protein.
          Length = 337

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +3

Query: 90  PEEKPICNAVAVFRERGNYLQRLEQFEKAIQAYNEALRWNSSDV 221
           P +  I  A  + +E GN L +  QFE A+Q YN A++ N   V
Sbjct: 97  PSDSDISQANKL-KEEGNDLMKASQFEAAVQKYNAAIKLNRDPV 139


>AF125964-5|AAP13765.1|  722|Caenorhabditis elegans Hypothetical
           protein W03G1.6b protein.
          Length = 722

 Score = 31.9 bits (69), Expect = 0.48
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = +3

Query: 84  LVPEEKPICNAVA-VFRERGNYLQRLEQFEKAIQAYNEALRWNSSDVRSLIGRSVARAKS 260
           L P  K +  A+  V  ER   +++L + +     Y + ++WN+   ++ I R VAR  S
Sbjct: 234 LSPLSKQLLRAMLQVVPERRISVKKLLEHDWLNHKYTQPVKWNTIYDKNFIDRDVARVMS 293

Query: 261 TYY 269
            YY
Sbjct: 294 KYY 296


>AF125964-2|AAD14754.1|  726|Caenorhabditis elegans Hypothetical
           protein W03G1.6a protein.
          Length = 726

 Score = 31.9 bits (69), Expect = 0.48
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = +3

Query: 84  LVPEEKPICNAVA-VFRERGNYLQRLEQFEKAIQAYNEALRWNSSDVRSLIGRSVARAKS 260
           L P  K +  A+  V  ER   +++L + +     Y + ++WN+   ++ I R VAR  S
Sbjct: 234 LSPLSKQLLRAMLQVVPERRISVKKLLEHDWLNHKYTQPVKWNTIYDKNFIDRDVARVMS 293

Query: 261 TYY 269
            YY
Sbjct: 294 KYY 296


>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin
           (drosophila actin-binding)homolog protein 1, isoform a
           protein.
          Length = 4488

 Score = 31.9 bits (69), Expect = 0.48
 Identities = 19/62 (30%), Positives = 36/62 (58%)
 Frame = +3

Query: 525 RVELNKESIDLDASRALKHRSRMQAQETQQVQEISRAEKQKYEQISRLMASKYLERMAHD 704
           R +  +E ++ +  R L+H  R++ Q+ QQ+ E  ++EK   E+ +RL   +   R+ H+
Sbjct: 53  REKAERERLE-EERRQLEHEKRLRQQQQQQLFEREKSEK---EERARLEEER--RRLEHE 106

Query: 705 KH 710
           KH
Sbjct: 107 KH 108


>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin
           (drosophila actin-binding)homolog protein 1, isoform d
           protein.
          Length = 4369

 Score = 31.9 bits (69), Expect = 0.48
 Identities = 19/62 (30%), Positives = 36/62 (58%)
 Frame = +3

Query: 525 RVELNKESIDLDASRALKHRSRMQAQETQQVQEISRAEKQKYEQISRLMASKYLERMAHD 704
           R +  +E ++ +  R L+H  R++ Q+ QQ+ E  ++EK   E+ +RL   +   R+ H+
Sbjct: 53  REKAERERLE-EERRQLEHEKRLRQQQQQQLFEREKSEK---EERARLEEER--RRLEHE 106

Query: 705 KH 710
           KH
Sbjct: 107 KH 108


>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin
           (drosophila actin-binding)homolog protein 1, isoform c
           protein.
          Length = 4447

 Score = 31.9 bits (69), Expect = 0.48
 Identities = 19/62 (30%), Positives = 36/62 (58%)
 Frame = +3

Query: 525 RVELNKESIDLDASRALKHRSRMQAQETQQVQEISRAEKQKYEQISRLMASKYLERMAHD 704
           R +  +E ++ +  R L+H  R++ Q+ QQ+ E  ++EK   E+ +RL   +   R+ H+
Sbjct: 53  REKAERERLE-EERRQLEHEKRLRQQQQQQLFEREKSEK---EERARLEEER--RRLEHE 106

Query: 705 KH 710
           KH
Sbjct: 107 KH 108


>Z68159-8|CAD01080.1|  310|Caenorhabditis elegans Hypothetical
           protein C33D9.9 protein.
          Length = 310

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 14/41 (34%), Positives = 26/41 (63%)
 Frame = +3

Query: 546 SIDLDASRALKHRSRMQAQETQQVQEISRAEKQKYEQISRL 668
           S +L+AS +    S     + +++Q++ +A K+K EQIS+L
Sbjct: 239 SEELEASSSYPIASMKNCLKNEEIQKMQKALKEKDEQISKL 279


>Z93395-2|CAB07705.1|  905|Caenorhabditis elegans Hypothetical
           protein ZC101.1 protein.
          Length = 905

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/45 (28%), Positives = 24/45 (53%)
 Frame = +3

Query: 576 KHRSRMQAQETQQVQEISRAEKQKYEQISRLMASKYLERMAHDKH 710
           +H    QAQ+ QQ QE  + E+Q++E+  +    +  ++ A   H
Sbjct: 642 QHHQAQQAQQHQQQQERQQQERQQHERQQQERQQQDRQQQAQQHH 686


>Z83112-5|CAB05541.1|  905|Caenorhabditis elegans Hypothetical
           protein ZC101.1 protein.
          Length = 905

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/45 (28%), Positives = 24/45 (53%)
 Frame = +3

Query: 576 KHRSRMQAQETQQVQEISRAEKQKYEQISRLMASKYLERMAHDKH 710
           +H    QAQ+ QQ QE  + E+Q++E+  +    +  ++ A   H
Sbjct: 642 QHHQAQQAQQHQQQQERQQQERQQHERQQQERQQQDRQQQAQQHH 686


>AL110485-7|CAB60355.1|  237|Caenorhabditis elegans Hypothetical
           protein Y46G5A.12 protein.
          Length = 237

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 18/62 (29%), Positives = 30/62 (48%)
 Frame = +3

Query: 534 LNKESIDLDASRALKHRSRMQAQETQQVQEISRAEKQKYEQISRLMASKYLERMAHDKHF 713
           LNK   +LD  RA     RM+AQE + + +I    K+      ++MA   +    + K F
Sbjct: 22  LNKAIRELDRERA-----RMEAQEKKVIADIKNMAKKNQMDSVKVMAKDLVRTRRYIKKF 76

Query: 714 LI 719
           ++
Sbjct: 77  IV 78


>AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical
            protein Y111B2A.14 protein.
          Length = 1481

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 14/49 (28%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
 Frame = +3

Query: 567  RALKHRS--RMQAQETQQVQEISRAEKQKYEQISRLMASKYLERMAHDK 707
            +AL+ R   + +A+  ++++E  + EK+K  +  R+ A K+ ERM  ++
Sbjct: 954  KALEQRKAKKEEAERLKKLEEKLKKEKEKQAEKDRIEAKKFEERMKKEQ 1002


>U53147-5|AAA96116.1|  153|Caenorhabditis elegans Hypothetical
           protein C01B7.5 protein.
          Length = 153

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +2

Query: 596 STRNSTGSRNISGRKTKIRTNLPFNGFEIL 685
           S R  + +R +  +KT + T+ P +GF IL
Sbjct: 18  SLRRLSSARGVGNKKTVVSTSTPLSGFVIL 47


>AF016683-8|AAM97998.1|  480|Caenorhabditis elegans Hypothetical
           protein K09F6.10 protein.
          Length = 480

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 6/48 (12%)
 Frame = +2

Query: 326 GATNSSANGIRKMC------F*TCSCYGASRSALSKIPSGFCRMRSPC 451
           G TN   NG+ K+C      F + SCY +     SK+   FC     C
Sbjct: 356 GVTNCEKNGVGKICEKCNIVFQSESCYESHLVKPSKLSLSFCERYEKC 403


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,607,782
Number of Sequences: 27780
Number of extensions: 305806
Number of successful extensions: 865
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 865
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)