Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1c21
(789 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D86971-1|BAA13207.2| 751|Homo sapiens KIAA0217 protein. 35 0.38
BC131630-1|AAI31631.1| 738|Homo sapiens La ribonucleoprotein do... 35 0.38
AL359878-4|CAI13663.2| 738|Homo sapiens La ribonucleoprotein do... 35 0.38
AL157709-4|CAI39596.2| 738|Homo sapiens La ribonucleoprotein do... 35 0.38
M60830-1|AAA35816.1| 448|Homo sapiens protein ( Human EVI2B3P g... 31 4.7
BC005926-1|AAH05926.1| 448|Homo sapiens ecotropic viral integra... 31 4.7
BC007631-1|AAH07631.1| 399|Homo sapiens paraneoplastic antigen ... 30 8.3
AK055322-1|BAB70902.1| 399|Homo sapiens protein ( Homo sapiens ... 30 8.3
>D86971-1|BAA13207.2| 751|Homo sapiens KIAA0217 protein.
Length = 751
Score = 34.7 bits (76), Expect = 0.38
Identities = 32/127 (25%), Positives = 54/127 (42%)
Frame = +2
Query: 371 PKLYADTYNYLNEKLMQPVVKEVYHDLNTISPANTVMNNPIASQIGLPLQSGQTPLNNLT 550
P+ ++ T++YL+ L+ P + + T SPA +P+ S P +S ++L
Sbjct: 374 PQTWSATHSYLDPPLVTPFPNTGFINGFT-SPAFKPAASPLTSLRQYPPRSRNPSKSHLR 432
Query: 551 QNIPSVNNPAKIGMGPEIINMVMGSSGNKPKIQESHIAGQVPSSPSRLQGASAQQGFIDG 730
IPS + P I N N + ++ AGQ + +R+Q SA G
Sbjct: 433 HAIPSAERGPGLLESPSIFNFTADRLINGVRSPQTRQAGQ---TRTRIQNPSAYAKREAG 489
Query: 731 PSAIGDG 751
P + G
Sbjct: 490 PGRVEPG 496
>BC131630-1|AAI31631.1| 738|Homo sapiens La ribonucleoprotein
domain family, member 5 protein.
Length = 738
Score = 34.7 bits (76), Expect = 0.38
Identities = 32/127 (25%), Positives = 54/127 (42%)
Frame = +2
Query: 371 PKLYADTYNYLNEKLMQPVVKEVYHDLNTISPANTVMNNPIASQIGLPLQSGQTPLNNLT 550
P+ ++ T++YL+ L+ P + + T SPA +P+ S P +S ++L
Sbjct: 361 PQTWSATHSYLDPPLVTPFPNTGFINGFT-SPAFKPAASPLTSLRQYPPRSRNPSKSHLR 419
Query: 551 QNIPSVNNPAKIGMGPEIINMVMGSSGNKPKIQESHIAGQVPSSPSRLQGASAQQGFIDG 730
IPS + P I N N + ++ AGQ + +R+Q SA G
Sbjct: 420 HAIPSAERGPGLLESPSIFNFTADRLINGVRSPQTRQAGQ---TRTRIQNPSAYAKREAG 476
Query: 731 PSAIGDG 751
P + G
Sbjct: 477 PGRVEPG 483
>AL359878-4|CAI13663.2| 738|Homo sapiens La ribonucleoprotein
domain family, member 5 protein.
Length = 738
Score = 34.7 bits (76), Expect = 0.38
Identities = 32/127 (25%), Positives = 54/127 (42%)
Frame = +2
Query: 371 PKLYADTYNYLNEKLMQPVVKEVYHDLNTISPANTVMNNPIASQIGLPLQSGQTPLNNLT 550
P+ ++ T++YL+ L+ P + + T SPA +P+ S P +S ++L
Sbjct: 361 PQTWSATHSYLDPPLVTPFPNTGFINGFT-SPAFKPAASPLTSLRQYPPRSRNPSKSHLR 419
Query: 551 QNIPSVNNPAKIGMGPEIINMVMGSSGNKPKIQESHIAGQVPSSPSRLQGASAQQGFIDG 730
IPS + P I N N + ++ AGQ + +R+Q SA G
Sbjct: 420 HAIPSAERGPGLLESPSIFNFTADRLINGVRSPQTRQAGQ---TRTRIQNPSAYAKREAG 476
Query: 731 PSAIGDG 751
P + G
Sbjct: 477 PGRVEPG 483
>AL157709-4|CAI39596.2| 738|Homo sapiens La ribonucleoprotein
domain family, member 5 protein.
Length = 738
Score = 34.7 bits (76), Expect = 0.38
Identities = 32/127 (25%), Positives = 54/127 (42%)
Frame = +2
Query: 371 PKLYADTYNYLNEKLMQPVVKEVYHDLNTISPANTVMNNPIASQIGLPLQSGQTPLNNLT 550
P+ ++ T++YL+ L+ P + + T SPA +P+ S P +S ++L
Sbjct: 361 PQTWSATHSYLDPPLVTPFPNTGFINGFT-SPAFKPAASPLTSLRQYPPRSRNPSKSHLR 419
Query: 551 QNIPSVNNPAKIGMGPEIINMVMGSSGNKPKIQESHIAGQVPSSPSRLQGASAQQGFIDG 730
IPS + P I N N + ++ AGQ + +R+Q SA G
Sbjct: 420 HAIPSAERGPGLLESPSIFNFTADRLINGVRSPQTRQAGQ---TRTRIQNPSAYAKREAG 476
Query: 731 PSAIGDG 751
P + G
Sbjct: 477 PGRVEPG 483
>M60830-1|AAA35816.1| 448|Homo sapiens protein ( Human EVI2B3P
gene, exon and complete cds. ).
Length = 448
Score = 31.1 bits (67), Expect = 4.7
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 4/107 (3%)
Frame = +2
Query: 368 PPKLYADTYNYLNEKLMQPVVKEVYHDLNTISPANTVMNNPIASQIGLPL---QSGQTPL 538
PPK + T+ + + P K++ + P +TV N+P S G L + QTP
Sbjct: 138 PPKSFVYTFTQQSSSVQIPSRKQITVHNPSTQPTSTVKNSP-RSTPGFILDTTSNKQTPQ 196
Query: 539 NNLTQNIPSVNNPAKI-GMGPEIINMVMGSSGNKPKIQESHIAGQVP 676
N +I ++ + M II +V+ KP + + + AG+ P
Sbjct: 197 KNNYNSIAAILIGVLLTSMLVAIIIIVLWKCLRKPVLNDQNWAGRSP 243
>BC005926-1|AAH05926.1| 448|Homo sapiens ecotropic viral
integration site 2B protein.
Length = 448
Score = 31.1 bits (67), Expect = 4.7
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 4/107 (3%)
Frame = +2
Query: 368 PPKLYADTYNYLNEKLMQPVVKEVYHDLNTISPANTVMNNPIASQIGLPL---QSGQTPL 538
PPK + T+ + + P K++ + P +TV N+P S G L + QTP
Sbjct: 138 PPKSFVYTFTQQSSSVQIPSRKQITVHNPSTQPTSTVKNSP-RSTPGFILDTTSNKQTPQ 196
Query: 539 NNLTQNIPSVNNPAKI-GMGPEIINMVMGSSGNKPKIQESHIAGQVP 676
N +I ++ + M II +V+ KP + + + AG+ P
Sbjct: 197 KNNYNSIAAILIGVLLTSMLVAIIIIVLWKCLRKPVLNDQNWAGRSP 243
>BC007631-1|AAH07631.1| 399|Homo sapiens paraneoplastic antigen
like 6A protein.
Length = 399
Score = 30.3 bits (65), Expect = 8.3
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 630 VISQRFKKVTLRAKCPVAHQDFRERVRSKVL-LTALLQLVMESDTL 764
V + T+R KC A Q ER+ + VL L LLQ ME + L
Sbjct: 231 VFGDNESQATIRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEAL 276
>AK055322-1|BAB70902.1| 399|Homo sapiens protein ( Homo sapiens
cDNA FLJ30760 fis, clone FEBRA2000536, weakly similar to
Homo sapiens paraneoplastic cancer-testis-brain antigen
(MA5) ).
Length = 399
Score = 30.3 bits (65), Expect = 8.3
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 630 VISQRFKKVTLRAKCPVAHQDFRERVRSKVL-LTALLQLVMESDTL 764
V + T+R KC A Q ER+ + VL L LLQ ME + L
Sbjct: 231 VFGDNESQATIRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEAL 276
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,687,730
Number of Sequences: 237096
Number of extensions: 2329752
Number of successful extensions: 4179
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4179
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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