Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1c20
(749 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC071699-1|AAH71699.1| 195|Homo sapiens selenoprotein T protein. 115 2e-25
BC036738-1|AAH36738.3| 195|Homo sapiens selenoprotein T protein. 115 2e-25
BC026350-1|AAH26350.2| 195|Homo sapiens selenoprotein T protein. 115 2e-25
BC009556-1|AAH09556.2| 195|Homo sapiens selenoprotein T protein. 115 2e-25
BC008411-1|AAH08411.2| 195|Homo sapiens selenoprotein T protein. 115 2e-25
BC006012-1|AAH06012.2| 195|Homo sapiens selenoprotein T protein. 115 2e-25
BC009611-1|AAH09611.2| 195|Homo sapiens selenoprotein T protein. 114 3e-25
AF195141-1|AAF13696.1| 163|Homo sapiens selenoprotein T protein. 113 5e-25
CR457154-1|CAG33435.1| 137|Homo sapiens SELT protein. 93 1e-18
AY358096-1|AAQ88463.1| 137|Homo sapiens SELT protein. 93 1e-18
AY358095-1|AAQ88462.1| 137|Homo sapiens SELT protein. 93 1e-18
AF131856-1|AAD20063.1| 137|Homo sapiens Unknown protein. 93 1e-18
AL359257-2|CAI39759.1| 4640|Homo sapiens AC001226.5 protein. 31 3.3
AL159158-1|CAI16842.1| 4640|Homo sapiens AC001226.5 protein. 31 3.3
AL159154-1|CAH73736.1| 4640|Homo sapiens AC001226.5 protein. 31 3.3
AF075587-1|AAC39928.1| 4641|Homo sapiens protein associated with... 31 3.3
>BC071699-1|AAH71699.1| 195|Homo sapiens selenoprotein T protein.
Length = 195
Score = 115 bits (276), Expect = 2e-25
Identities = 55/153 (35%), Positives = 89/153 (58%), Gaps = 4/153 (2%)
Frame = +2
Query: 302 LNAMLLVCTLLFTLTHINADSDEGSIS----KIGTSVGHTMNIYYCYSCGYKKVFEDYAG 469
+ +LL+ + A ++ G + K+ + G + C S GY++VFE+Y
Sbjct: 1 MRLLLLLLVAASAMVRSEASANLGGVPSKRLKMQYATGPLLKFQICVSUGYRRVFEEYMR 60
Query: 470 IIQQKYPEISVIGANYDPPGFNMYLSRIIGFGKMLVIMCILSGVNIFAWLNKPQPAWWSW 649
+I Q+YP+I + G NY P +++ + K+++I I+ G + FA+ P+ W W
Sbjct: 61 VISQRYPDIRIEGENYLPQPIYRHIASFLSVFKLVLIGLIIVGKDPFAFFGMQAPSIWQW 120
Query: 650 CLENKLYACMMMFFLANMIEGQLISSGAFEISL 748
ENK+YACMM+FFL+NMIE Q +S+GAFEI+L
Sbjct: 121 GQENKVYACMMVFFLSNMIENQCMSTGAFEITL 153
>BC036738-1|AAH36738.3| 195|Homo sapiens selenoprotein T protein.
Length = 195
Score = 115 bits (276), Expect = 2e-25
Identities = 55/153 (35%), Positives = 89/153 (58%), Gaps = 4/153 (2%)
Frame = +2
Query: 302 LNAMLLVCTLLFTLTHINADSDEGSIS----KIGTSVGHTMNIYYCYSCGYKKVFEDYAG 469
+ +LL+ + A ++ G + K+ + G + C S GY++VFE+Y
Sbjct: 1 MRLLLLLLVAASAMVRSEASANLGGVPSKRLKMQYATGPLLKFQICVSUGYRRVFEEYMR 60
Query: 470 IIQQKYPEISVIGANYDPPGFNMYLSRIIGFGKMLVIMCILSGVNIFAWLNKPQPAWWSW 649
+I Q+YP+I + G NY P +++ + K+++I I+ G + FA+ P+ W W
Sbjct: 61 VISQRYPDIRIEGENYLPQPIYRHIASFLSVFKLVLIGLIIVGKDPFAFFGMQAPSIWQW 120
Query: 650 CLENKLYACMMMFFLANMIEGQLISSGAFEISL 748
ENK+YACMM+FFL+NMIE Q +S+GAFEI+L
Sbjct: 121 GQENKVYACMMVFFLSNMIENQCMSTGAFEITL 153
>BC026350-1|AAH26350.2| 195|Homo sapiens selenoprotein T protein.
Length = 195
Score = 115 bits (276), Expect = 2e-25
Identities = 55/153 (35%), Positives = 89/153 (58%), Gaps = 4/153 (2%)
Frame = +2
Query: 302 LNAMLLVCTLLFTLTHINADSDEGSIS----KIGTSVGHTMNIYYCYSCGYKKVFEDYAG 469
+ +LL+ + A ++ G + K+ + G + C S GY++VFE+Y
Sbjct: 1 MRLLLLLLVAASAMVRSEASANLGGVPSKRLKMQYATGPLLKFQICVSUGYRRVFEEYMR 60
Query: 470 IIQQKYPEISVIGANYDPPGFNMYLSRIIGFGKMLVIMCILSGVNIFAWLNKPQPAWWSW 649
+I Q+YP+I + G NY P +++ + K+++I I+ G + FA+ P+ W W
Sbjct: 61 VISQRYPDIRIEGENYLPQPIYRHIASFLSVFKLVLIGLIIVGKDPFAFFGMQAPSIWQW 120
Query: 650 CLENKLYACMMMFFLANMIEGQLISSGAFEISL 748
ENK+YACMM+FFL+NMIE Q +S+GAFEI+L
Sbjct: 121 GQENKVYACMMVFFLSNMIENQCMSTGAFEITL 153
>BC009556-1|AAH09556.2| 195|Homo sapiens selenoprotein T protein.
Length = 195
Score = 115 bits (276), Expect = 2e-25
Identities = 55/153 (35%), Positives = 89/153 (58%), Gaps = 4/153 (2%)
Frame = +2
Query: 302 LNAMLLVCTLLFTLTHINADSDEGSIS----KIGTSVGHTMNIYYCYSCGYKKVFEDYAG 469
+ +LL+ + A ++ G + K+ + G + C S GY++VFE+Y
Sbjct: 1 MRLLLLLLVAASAMVRSEASANLGGVPSKRLKMQYATGPLLKFQICVSUGYRRVFEEYMR 60
Query: 470 IIQQKYPEISVIGANYDPPGFNMYLSRIIGFGKMLVIMCILSGVNIFAWLNKPQPAWWSW 649
+I Q+YP+I + G NY P +++ + K+++I I+ G + FA+ P+ W W
Sbjct: 61 VISQRYPDIRIEGENYLPQPIYRHIASFLSVFKLVLIGLIIVGKDPFAFFGMQAPSIWQW 120
Query: 650 CLENKLYACMMMFFLANMIEGQLISSGAFEISL 748
ENK+YACMM+FFL+NMIE Q +S+GAFEI+L
Sbjct: 121 GQENKVYACMMVFFLSNMIENQCMSTGAFEITL 153
>BC008411-1|AAH08411.2| 195|Homo sapiens selenoprotein T protein.
Length = 195
Score = 115 bits (276), Expect = 2e-25
Identities = 55/153 (35%), Positives = 89/153 (58%), Gaps = 4/153 (2%)
Frame = +2
Query: 302 LNAMLLVCTLLFTLTHINADSDEGSIS----KIGTSVGHTMNIYYCYSCGYKKVFEDYAG 469
+ +LL+ + A ++ G + K+ + G + C S GY++VFE+Y
Sbjct: 1 MRLLLLLLVAASAMVRSEASANLGGVPSKRLKMQYATGPLLKFQICVSUGYRRVFEEYMR 60
Query: 470 IIQQKYPEISVIGANYDPPGFNMYLSRIIGFGKMLVIMCILSGVNIFAWLNKPQPAWWSW 649
+I Q+YP+I + G NY P +++ + K+++I I+ G + FA+ P+ W W
Sbjct: 61 VISQRYPDIRIEGENYLPQPIYRHIASFLSVFKLVLIGLIIVGKDPFAFFGMQAPSIWQW 120
Query: 650 CLENKLYACMMMFFLANMIEGQLISSGAFEISL 748
ENK+YACMM+FFL+NMIE Q +S+GAFEI+L
Sbjct: 121 GQENKVYACMMVFFLSNMIENQCMSTGAFEITL 153
>BC006012-1|AAH06012.2| 195|Homo sapiens selenoprotein T protein.
Length = 195
Score = 115 bits (276), Expect = 2e-25
Identities = 55/153 (35%), Positives = 89/153 (58%), Gaps = 4/153 (2%)
Frame = +2
Query: 302 LNAMLLVCTLLFTLTHINADSDEGSIS----KIGTSVGHTMNIYYCYSCGYKKVFEDYAG 469
+ +LL+ + A ++ G + K+ + G + C S GY++VFE+Y
Sbjct: 1 MRLLLLLLVAASAMVRSEASANLGGVPSKRLKMQYATGPLLKFQICVSUGYRRVFEEYMR 60
Query: 470 IIQQKYPEISVIGANYDPPGFNMYLSRIIGFGKMLVIMCILSGVNIFAWLNKPQPAWWSW 649
+I Q+YP+I + G NY P +++ + K+++I I+ G + FA+ P+ W W
Sbjct: 61 VISQRYPDIRIEGENYLPQPIYRHIASFLSVFKLVLIGLIIVGKDPFAFFGMQAPSIWQW 120
Query: 650 CLENKLYACMMMFFLANMIEGQLISSGAFEISL 748
ENK+YACMM+FFL+NMIE Q +S+GAFEI+L
Sbjct: 121 GQENKVYACMMVFFLSNMIENQCMSTGAFEITL 153
>BC009611-1|AAH09611.2| 195|Homo sapiens selenoprotein T protein.
Length = 195
Score = 114 bits (275), Expect = 3e-25
Identities = 51/122 (41%), Positives = 78/122 (63%)
Frame = +2
Query: 383 KIGTSVGHTMNIYYCYSCGYKKVFEDYAGIIQQKYPEISVIGANYDPPGFNMYLSRIIGF 562
K+ + G + C S GY++VFE+Y +I Q+YP+I + G NY P +++ +
Sbjct: 32 KMQYATGPLLKFQICVSUGYRRVFEEYMRVISQRYPDIRIEGENYLPQPIYRHIASFLSV 91
Query: 563 GKMLVIMCILSGVNIFAWLNKPQPAWWSWCLENKLYACMMMFFLANMIEGQLISSGAFEI 742
K+++I I+ G + FA+ P+ W W ENK+YACMM+FFL+NMIE Q +S+GAFEI
Sbjct: 92 FKLVLIGLIIVGKDPFAFFGMQAPSIWQWGQENKVYACMMVFFLSNMIENQCMSTGAFEI 151
Query: 743 SL 748
+L
Sbjct: 152 TL 153
>AF195141-1|AAF13696.1| 163|Homo sapiens selenoprotein T protein.
Length = 163
Score = 113 bits (273), Expect = 5e-25
Identities = 50/118 (42%), Positives = 76/118 (64%)
Frame = +2
Query: 395 SVGHTMNIYYCYSCGYKKVFEDYAGIIQQKYPEISVIGANYDPPGFNMYLSRIIGFGKML 574
+ G + C S GY++VFE+Y +I Q+YP+I + G NY P +++ + K++
Sbjct: 4 ATGPLLKFQICVSUGYRRVFEEYMRVISQRYPDIRIEGENYLPQPIYRHIASFLSVFKLV 63
Query: 575 VIMCILSGVNIFAWLNKPQPAWWSWCLENKLYACMMMFFLANMIEGQLISSGAFEISL 748
+I I+ G + FA+ P+ W W ENK+YACMM+FFL+NMIE Q +S+GAFEI+L
Sbjct: 64 LIGLIIVGKDPFAFFGMQAPSIWQWGQENKVYACMMVFFLSNMIENQCMSTGAFEITL 121
>CR457154-1|CAG33435.1| 137|Homo sapiens SELT protein.
Length = 137
Score = 92.7 bits (220), Expect = 1e-18
Identities = 41/93 (44%), Positives = 62/93 (66%)
Frame = +2
Query: 470 IIQQKYPEISVIGANYDPPGFNMYLSRIIGFGKMLVIMCILSGVNIFAWLNKPQPAWWSW 649
+I Q+YP+I + G NY P +++ + K+++I I+ G + FA+ P+ W W
Sbjct: 3 VISQRYPDIRIEGENYLPQPIYRHIASFLSVFKLVLIGLIIVGKDPFAFFGMQAPSIWQW 62
Query: 650 CLENKLYACMMMFFLANMIEGQLISSGAFEISL 748
ENK+YACMM+FFL+NMIE Q +S+GAFEI+L
Sbjct: 63 GQENKVYACMMVFFLSNMIENQCMSTGAFEITL 95
>AY358096-1|AAQ88463.1| 137|Homo sapiens SELT protein.
Length = 137
Score = 92.7 bits (220), Expect = 1e-18
Identities = 41/93 (44%), Positives = 62/93 (66%)
Frame = +2
Query: 470 IIQQKYPEISVIGANYDPPGFNMYLSRIIGFGKMLVIMCILSGVNIFAWLNKPQPAWWSW 649
+I Q+YP+I + G NY P +++ + K+++I I+ G + FA+ P+ W W
Sbjct: 3 VISQRYPDIRIEGENYLPQPIYRHIASFLSVFKLVLIGLIIVGKDPFAFFGMQAPSIWQW 62
Query: 650 CLENKLYACMMMFFLANMIEGQLISSGAFEISL 748
ENK+YACMM+FFL+NMIE Q +S+GAFEI+L
Sbjct: 63 GQENKVYACMMVFFLSNMIENQCMSTGAFEITL 95
>AY358095-1|AAQ88462.1| 137|Homo sapiens SELT protein.
Length = 137
Score = 92.7 bits (220), Expect = 1e-18
Identities = 41/93 (44%), Positives = 62/93 (66%)
Frame = +2
Query: 470 IIQQKYPEISVIGANYDPPGFNMYLSRIIGFGKMLVIMCILSGVNIFAWLNKPQPAWWSW 649
+I Q+YP+I + G NY P +++ + K+++I I+ G + FA+ P+ W W
Sbjct: 3 VISQRYPDIRIEGENYLPQPIYRHIASFLSVFKLVLIGLIIVGKDPFAFFGMQAPSIWQW 62
Query: 650 CLENKLYACMMMFFLANMIEGQLISSGAFEISL 748
ENK+YACMM+FFL+NMIE Q +S+GAFEI+L
Sbjct: 63 GQENKVYACMMVFFLSNMIENQCMSTGAFEITL 95
>AF131856-1|AAD20063.1| 137|Homo sapiens Unknown protein.
Length = 137
Score = 92.7 bits (220), Expect = 1e-18
Identities = 41/93 (44%), Positives = 62/93 (66%)
Frame = +2
Query: 470 IIQQKYPEISVIGANYDPPGFNMYLSRIIGFGKMLVIMCILSGVNIFAWLNKPQPAWWSW 649
+I Q+YP+I + G NY P +++ + K+++I I+ G + FA+ P+ W W
Sbjct: 3 VISQRYPDIRIEGENYLPQPIYRHIASFLSVFKLVLIGLIIVGKDPFAFFGMQAPSIWQW 62
Query: 650 CLENKLYACMMMFFLANMIEGQLISSGAFEISL 748
ENK+YACMM+FFL+NMIE Q +S+GAFEI+L
Sbjct: 63 GQENKVYACMMVFFLSNMIENQCMSTGAFEITL 95
>AL359257-2|CAI39759.1| 4640|Homo sapiens AC001226.5 protein.
Length = 4640
Score = 31.5 bits (68), Expect = 3.3
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 446 KVFEDYAGIIQQKYPEISVIGANYDPPGFN 535
KV + G++QQ P ++++ Y PP FN
Sbjct: 1927 KVAVEVFGLVQQLLPSVAILNQKYAPPAFN 1956
>AL159158-1|CAI16842.1| 4640|Homo sapiens AC001226.5 protein.
Length = 4640
Score = 31.5 bits (68), Expect = 3.3
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 446 KVFEDYAGIIQQKYPEISVIGANYDPPGFN 535
KV + G++QQ P ++++ Y PP FN
Sbjct: 1927 KVAVEVFGLVQQLLPSVAILNQKYAPPAFN 1956
>AL159154-1|CAH73736.1| 4640|Homo sapiens AC001226.5 protein.
Length = 4640
Score = 31.5 bits (68), Expect = 3.3
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 446 KVFEDYAGIIQQKYPEISVIGANYDPPGFN 535
KV + G++QQ P ++++ Y PP FN
Sbjct: 1927 KVAVEVFGLVQQLLPSVAILNQKYAPPAFN 1956
>AF075587-1|AAC39928.1| 4641|Homo sapiens protein associated with Myc
protein.
Length = 4641
Score = 31.5 bits (68), Expect = 3.3
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 446 KVFEDYAGIIQQKYPEISVIGANYDPPGFN 535
KV + G++QQ P ++++ Y PP FN
Sbjct: 1927 KVAVEVFGLVQQLLPSVAILNQKYAPPAFN 1956
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,394,892
Number of Sequences: 237096
Number of extensions: 2334877
Number of successful extensions: 4028
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4028
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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