Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1c19
(760 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2774| Best HMM Match : No HMM Matches (HMM E-Value=.) 220 9e-58
SB_33138| Best HMM Match : Mov34 (HMM E-Value=0) 40 0.003
SB_43771| Best HMM Match : AMP-binding (HMM E-Value=0.041) 31 1.3
SB_21709| Best HMM Match : F5_F8_type_C (HMM E-Value=8.7e-21) 29 3.1
SB_22225| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_48450| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_31215| Best HMM Match : Acid_phosphat_A (HMM E-Value=2.6e-26) 28 9.5
SB_24724| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
>SB_2774| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 322
Score = 220 bits (538), Expect = 9e-58
Identities = 117/177 (66%), Positives = 131/177 (74%), Gaps = 1/177 (0%)
Frame = +1
Query: 229 DHFNRMSKIGNQKRVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMY 408
DHFNRM K+G+QKRVVGVLLG R KGVLDV+N FAVPFDEDD+D++VWFLDHDYLENMY
Sbjct: 23 DHFNRMGKVGSQKRVVGVLLGS-RRKGVLDVANCFAVPFDEDDRDQNVWFLDHDYLENMY 81
Query: 409 GMFKKVNAREKVVGWYHTG-PKLHQNDIAINELIRRYCPNSVLVIIDAKPKDLGLPTEAY 585
MFKKVN VG+ LH DIA + VLVIIDAKPKDL LPT+AY
Sbjct: 82 AMFKKVN-----VGFVDMSFIVLHPYDIACVQ---------VLVIIDAKPKDLRLPTDAY 127
Query: 586 QAVEEVHDDGTPTSRTFEHVPSEIXXXXXXXXXXXHLLRDIKDTTVGSLSQRITNQL 756
AVEEVHDDGTPT++TFEH+PSEI HLLRDIK+ T G+LSQRITNQL
Sbjct: 128 VAVEEVHDDGTPTTKTFEHIPSEIGAEEAEEVGVEHLLRDIKNLTAGTLSQRITNQL 184
>SB_33138| Best HMM Match : Mov34 (HMM E-Value=0)
Length = 195
Score = 39.5 bits (88), Expect = 0.003
Identities = 30/121 (24%), Positives = 57/121 (47%), Gaps = 5/121 (4%)
Frame = +1
Query: 247 SKIGNQKRVVGVLLGCWRAKG-VLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKK 423
++ G V+G++LG + G + V ++FA+P + + + ++Y+ K
Sbjct: 66 ARSGGNLEVMGLMLG--KVDGDTMIVMDAFALPVEGTETRVNAQAAAYEYMAAYIESAKS 123
Query: 424 VNAREKVVGWYHTGPK----LHQNDIAINELIRRYCPNSVLVIIDAKPKDLGLPTEAYQA 591
V E +GWYH+ P L D+ +++ + + I+ KP D G P+E YQ
Sbjct: 124 VGRLENAIGWYHSHPGYGCWLSGIDVG-TQMVNQQFQEPFVAIVGYKPPDEG-PSE-YQT 180
Query: 592 V 594
+
Sbjct: 181 I 181
>SB_43771| Best HMM Match : AMP-binding (HMM E-Value=0.041)
Length = 339
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/86 (22%), Positives = 41/86 (47%)
Frame = +1
Query: 274 VGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNAREKVVGW 453
VG + AK ++D + VP + + + F ++ ++ + ++K +A GW
Sbjct: 174 VGTMAPNVEAK-IIDSEHGNVVPINTPGE---ICFRGYNVMQGYWDDYEKTDAAIDSNGW 229
Query: 454 YHTGPKLHQNDIAINELIRRYCPNSV 531
+H+G LH + + E I+ +C +
Sbjct: 230 FHSG--LHPGESSSPEEIKEFCKGQI 253
>SB_21709| Best HMM Match : F5_F8_type_C (HMM E-Value=8.7e-21)
Length = 532
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +1
Query: 328 SFAVPFDEDDKDKSVW--FLDHDYLENMYGMFKKVNARE 438
S++V F ED K W +++ DYL+ G KVN R+
Sbjct: 482 SYSVSFSED---KKTWQKYVERDYLQKAMGAITKVNQRK 517
>SB_22225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 171 HHESNHQSGGSSVSVAQCRGPF*PHE*NRESETSSRCSI 287
HH+ ++ G V++ RGP H+ E T+SR ++
Sbjct: 28 HHDWTYEGGHDIVTIGPTRGPRHHHDWTYEGSTTSRLNL 66
>SB_48450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 457
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 355 RLHQTGLRSCSIRLRHPWLSNNPIEHRLLVSDSR 254
R HQT +R S +RH S++ I H SDSR
Sbjct: 57 RHHQTFIRHSSDIIRHHQTSSDIIRHHQTSSDSR 90
>SB_31215| Best HMM Match : Acid_phosphat_A (HMM E-Value=2.6e-26)
Length = 448
Score = 27.9 bits (59), Expect = 9.5
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +1
Query: 229 DHFNRM-SKIGNQKRVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLD-HDYLEN 402
D FN S+I + K V+G+ L C V + S+S+ F D D +F D Y +
Sbjct: 236 DLFNLQGSEIIHVKHVIGMYLACTFEVAVYNRSDSWCSVFRPSDLDVLEYFYDLKHYWKR 295
Query: 403 MYG 411
YG
Sbjct: 296 GYG 298
>SB_24724| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2021
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = +1
Query: 232 HFNRMSKIGNQKRVVGVLLGCWRAKGVLDVSNSFAVPF----DEDDKDKSVWFLDHDYLE 399
HF+R+ + G + V V+L W V +SNS + F +E ++ + + + Y+E
Sbjct: 466 HFHRLIQAGMIPQEVHVVLHLWNTSWVSTLSNSSSADFVSLSNEIQREIYILYKNSSYIE 525
Query: 400 NM 405
+
Sbjct: 526 EL 527
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,787,163
Number of Sequences: 59808
Number of extensions: 441216
Number of successful extensions: 848
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2070332524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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