Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1c16
(798 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC3H7.07c |||phosphoserine phosphatase |Schizosaccharomyces po... 75 1e-14
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 33 0.036
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 33 0.036
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 29 0.58
SPAC7D4.11c |sec39||secretory pathway protein Sec39 |Schizosacch... 29 1.0
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 28 1.3
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 28 1.8
SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces pom... 27 3.1
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 4.1
SPCC31H12.08c |ccr4|SPCC5E4.02c|CCR4-Not complex subunit Ccr4 |S... 26 5.4
SPAC16C9.02c |||S-methyl-5-thioadenosine phosphorylase|Schizosac... 26 7.2
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 26 7.2
SPBC1921.03c |mex67||mRNA export receptor Mex67|Schizosaccharomy... 26 7.2
SPCC663.15c |||conserved fungal protein|Schizosaccharomyces pomb... 25 9.5
>SPBC3H7.07c |||phosphoserine phosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 298
Score = 74.9 bits (176), Expect = 1e-14
Identities = 48/126 (38%), Positives = 74/126 (58%), Gaps = 1/126 (0%)
Frame = +1
Query: 424 VCFDVDSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGNMTFQEALKKRLDIIRP-NVGQ 600
V FD+DST+IQ E IDELA G EV +T+ AM G + FQE+L++R+ +++ +V
Sbjct: 79 VVFDMDSTLIQQECIDELAAEAGIQKEVATITSLAMNGEIDFQESLRRRVSLLQGLSVDV 138
Query: 601 IREFIEKFPVRLTPGITELVKELHERGVIVYLVSGGFRSLIEPVAERLNIPTINIFANRL 780
I + I K + TPG +L L + G + + SGGF + E V +L++ +AN L
Sbjct: 139 INKVIGK--ITFTPGAKQLCHCLKQMGATLVVASGGFVPMAEYVKGQLDLD--YAYANVL 194
Query: 781 KFYFNG 798
+F +G
Sbjct: 195 EFSDDG 200
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 33.5 bits (73), Expect = 0.036
Identities = 38/130 (29%), Positives = 64/130 (49%)
Frame = -2
Query: 740 LSATGSIRLLNPPETRYTMTPLSCNSFTNSVIPGVSLTGNFSMNSLI*PTLGLMMSSLFF 561
+S + S + P T T + LS S T+S P VS T + + +S PT S L
Sbjct: 157 VSISSSSLSSSDPLTSSTFSSLS--SSTSSSQPSVSSTSSSTFSSAA-PT-STSSSYLSS 212
Query: 560 KASWNVILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSWTVCWG 381
+ + P +S+ S LTSS +L++SS+PS+ + STS S+ +++ +
Sbjct: 213 SSVVSSSSSPSSSSSSTLTSS----SLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSS 268
Query: 380 DITLIDTSES 351
++I +S S
Sbjct: 269 SSSIISSSSS 278
Score = 29.5 bits (63), Expect = 0.58
Identities = 29/110 (26%), Positives = 55/110 (50%), Gaps = 1/110 (0%)
Frame = -2
Query: 740 LSATGSIRLLNPPETRYTMTPLSCNSFTNSVIPGVSLTGNFSMNSLI*PTLGLMMSSLFF 561
LS++ + + P + + T L+ +S + S IP S + + + +SL + SS
Sbjct: 210 LSSSSVVSSSSSPSSSSSST-LTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSS-- 266
Query: 560 KASWNVILPPIASAVS-LLTSSPFPQNLASSSMPSSCMTVESTSKQTQSA 414
+S ++I +S+ S TSS + +SSS P+S + S+S + S+
Sbjct: 267 SSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSSSS 316
Score = 26.2 bits (55), Expect = 5.4
Identities = 29/120 (24%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Frame = -2
Query: 743 SLSATGSIRLLNPPETRYTMTPLSCNSF-TNSVIPGVSLTGNFSMNSLI*PTL-GLMMSS 570
S+S+T S + T + + LS +S ++S P S + + +SL ++ SS
Sbjct: 188 SVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSS 247
Query: 569 LFFKASWNVILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSWTV 390
+S + ++ S +SS + +SSS P+S + S+S + S+ + S T+
Sbjct: 248 SSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTI 307
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 33.5 bits (73), Expect = 0.036
Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Frame = -2
Query: 689 TMTPLSCNSFTNSVIPGVSLTGNFSMNSLI*PTLGLMMSSLFFKASWNVILPPIASAVSL 510
T TP++ ++ NS P SLT ++NS + + SS+ ++ PI S+ +
Sbjct: 2552 TSTPITSSTVVNSSTPITSLT---ALNS----STPITSSSVLNSST------PITSSTVV 2598
Query: 509 LTSSPFPQN-LASSSMPSSCMTVESTSKQ-TQSAVLNNSWTVCWGDITLIDTSESV 348
TS+P + + +SS P + T +TS T S+VLN+S + T ++TS S+
Sbjct: 2599 NTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPIT--SSTALNTSTSI 2652
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 29.5 bits (63), Expect = 0.58
Identities = 26/87 (29%), Positives = 43/87 (49%)
Frame = -2
Query: 674 SCNSFTNSVIPGVSLTGNFSMNSLI*PTLGLMMSSLFFKASWNVILPPIASAVSLLTSSP 495
+C++ T S +S +G S S+ +G SS +F S + P +S+ S +SSP
Sbjct: 110 ACSTCTIST-SSLSYSGTISSTSIAPSMIGTRTSSSYFITS-SSSTP--SSSSSSSSSSP 165
Query: 494 FPQNLASSSMPSSCMTVESTSKQTQSA 414
+ SSS S + S+SK + S+
Sbjct: 166 SSSSSKSSSSSKSSSSSSSSSKSSSSS 192
>SPAC7D4.11c |sec39||secretory pathway protein Sec39
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 769
Score = 28.7 bits (61), Expect = 1.0
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = -2
Query: 542 ILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSWTV 390
+L I A++LLT P +S+ SC +S K ++ +LN T+
Sbjct: 334 LLMEITKAIALLTQLKVPAPTFKTSVSISCSNFDSQIKYLENVLLNALGTI 384
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 28.3 bits (60), Expect = 1.3
Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 8/132 (6%)
Frame = -2
Query: 770 AKMLIVGMFSLSATGS--IRLLNPPETRYTMTPLSCNSFTNSVIPGVSLTGNFSMNSLI* 597
+ LI+ F+ S S ++ + P T + +S +S ++ I S N +++S +
Sbjct: 440 SSFLIISTFTSSYEHSEPFKVSSVPLTSNNFSSISHSSASSLPITPSSYLSNTTLHSSVQ 499
Query: 596 P------TLGLMMSSLFFKASWNVILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVEST 435
T+ + S+ + S N PI + SL S FP + SSS S ++ T
Sbjct: 500 SSQSSQFTVSVPSSTQSYSTSSN-FTTPITISTSL---SSFPTTIVSSSFQYSSLSSNVT 555
Query: 434 SKQTQSAVLNNS 399
+ QS+ L++S
Sbjct: 556 TTNAQSSSLSSS 567
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 27.9 bits (59), Expect = 1.8
Identities = 26/95 (27%), Positives = 44/95 (46%)
Frame = -2
Query: 710 NPPETRYTMTPLSCNSFTNSVIPGVSLTGNFSMNSLI*PTLGLMMSSLFFKASWNVILPP 531
+P ET TMT +C+S I VS T S + + ++S + ++ ++
Sbjct: 566 SPEETTTTMTTTTCSSRPEETISTVSTTSTVSESG----SSSASITSTYPSSTLSMTTSH 621
Query: 530 IASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQ 426
++S+ S+ +SS + SSSM STS Q
Sbjct: 622 LSSS-SVHSSSAHSSSSRSSSMSLPPSAGSSTSLQ 655
>SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 772
Score = 27.1 bits (57), Expect = 3.1
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = -2
Query: 539 LPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSWT 393
LP + AVS +SS P + S+S +S S+ K T S SWT
Sbjct: 196 LPALDHAVSSSSSSDLPSDPNSASYIASSKQKASSLKLTSSLKKFYSWT 244
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 26.6 bits (56), Expect = 4.1
Identities = 25/87 (28%), Positives = 43/87 (49%)
Frame = -2
Query: 683 TPLSCNSFTNSVIPGVSLTGNFSMNSLI*PTLGLMMSSLFFKASWNVILPPIASAVSLLT 504
T SC + T+ IP G+ S+++ I PT+ +S S ++ +PP +++ +
Sbjct: 168 TSTSCTTSTS--IPPTG--GSSSLSTPITPTVPPTSTS-----STSIPIPPTSTSSTDTN 218
Query: 503 SSPFPQNLASSSMPSSCMTVESTSKQT 423
SSP P S + +S T S+S T
Sbjct: 219 SSPLPTTSTSCTTSTSIPTGGSSSLST 245
>SPCC31H12.08c |ccr4|SPCC5E4.02c|CCR4-Not complex subunit Ccr4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 690
Score = 26.2 bits (55), Expect = 5.4
Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 1/110 (0%)
Frame = -2
Query: 644 PGVSLTGNFSMNSLI*PTLGLMMSSLFFKASWNVILPPIASAVSLLTSSPFPQNLASSSM 465
PG S+ N + +SSL K + + + ++ +L TSS N S +
Sbjct: 79 PGFSMNYNARTGAFTGGPNAAGLSSLGGKYNTSSTTTTLTTSTTLNTSSGTTLNSTSKTT 138
Query: 464 PSSCMTVESTSKQTQSAVLNNSWT-VCWGDITLIDTSESVFNVAYCRLLF 318
SS + V+ ++ S WT + G I L + S +F ++ L+
Sbjct: 139 TSS-VAVDDQKSKSDSKKERRDWTCLDLGGIGLRNVSTDLFKFSFLTELY 187
>SPAC16C9.02c |||S-methyl-5-thioadenosine
phosphorylase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 307
Score = 25.8 bits (54), Expect = 7.2
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -2
Query: 797 PLK*NLSRLAKMLIVGMFSLSATGSIRLLNPPE 699
P + N++ L + ++ + S SA GS+R PPE
Sbjct: 72 PSRANIAALKSLGVLAIVSFSAVGSLREDIPPE 104
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 25.8 bits (54), Expect = 7.2
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Frame = -2
Query: 677 LSCNSFTNSVIPGVSLTGNFSMNSLI*PTLGLMMSSLFFKASWNVILP-PIASAVSLLTS 501
LS +FT S +SLT S S T+ SS+ + S ++I+ PI S+ TS
Sbjct: 516 LSTENFT-SASSSLSLTNAKSSLSTPSTTIPTSNSSVSLQTSSSLIISSPIISSSLTATS 574
Query: 500 SPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSWTVC 387
+ P L S PS+ S + + ++ TVC
Sbjct: 575 TSTPA-LTHSITPSNTSYTSSLIPSSSTDYSSSLITVC 611
>SPBC1921.03c |mex67||mRNA export receptor Mex67|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 596
Score = 25.8 bits (54), Expect = 7.2
Identities = 9/25 (36%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Frame = -2
Query: 551 WNVILPPIASAVSLLTSSPF--PQN 483
WN++LP + +A+ ++ F PQN
Sbjct: 445 WNLVLPSVGAAIKIVVHGQFEEPQN 469
>SPCC663.15c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 657
Score = 25.4 bits (53), Expect = 9.5
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -1
Query: 777 SISEDVDSWD 748
S+SEDVDSWD
Sbjct: 182 SVSEDVDSWD 191
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,015,809
Number of Sequences: 5004
Number of extensions: 60928
Number of successful extensions: 219
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 217
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 389395636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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