Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1c16
(798 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0457 - 23800451-23800576,23801259-23801312,23801390-238015... 145 3e-35
12_02_0452 - 19188601-19188726,19189364-19189417,19189493-191896... 99 5e-21
01_07_0175 - 41715304-41716760,41717200-41717500,41718109-41718369 33 0.20
01_05_0314 - 20779862-20780286,20780734-20781286 33 0.20
06_03_0706 + 23719392-23719641,23720337-23720383,23720988-237210... 32 0.61
05_07_0323 + 29260608-29260836,29262242-29262513,29263349-292634... 32 0.61
03_06_0421 - 33797836-33797992,33798450-33798549,33798646-337987... 31 1.1
12_01_0090 + 717524-719080 30 1.9
02_05_0767 + 31609773-31610174,31610409-31610501,31610608-316106... 29 4.3
02_02_0109 + 6830802-6833412,6833491-6833861 28 7.5
02_01_0567 - 4168164-4168250,4168672-4168828,4168951-4169090,417... 28 7.5
01_06_0768 - 31829753-31829851,31830454-31830593,31830729-318308... 28 7.5
09_06_0242 - 21806370-21806483,21806574-21806660,21806865-218069... 28 9.9
08_02_0657 - 19749835-19751942,19753123-19753561 28 9.9
04_03_0036 - 9950353-9950379,9950753-9950791,9951021-9951194,995... 28 9.9
>11_06_0457 -
23800451-23800576,23801259-23801312,23801390-23801539,
23801919-23802012,23802460-23802567,23802661-23802793,
23802903-23803139,23803488-23803586,23804968-23804983
Length = 338
Score = 145 bits (352), Expect = 3e-35
Identities = 72/139 (51%), Positives = 93/139 (66%)
Frame = +1
Query: 382 PQQTVQELFRTADCVCFDVDSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGNMTFQEAL 561
P + V E + AD VCFDVDSTV DEGIDELA FCG G V TA+AM G + F+EAL
Sbjct: 115 PSKGVLETWCNADAVCFDVDSTVCLDEGIDELADFCGAGKAVAEWTAKAMTGTVPFEEAL 174
Query: 562 KKRLDIIRPNVGQIREFIEKFPVRLTPGITELVKELHERGVIVYLVSGGFRSLIEPVAER 741
RL +I+P + Q+ + + K P R++PGI +L+K+L V+LVSGGFR +I+PVA
Sbjct: 175 AARLSLIKPYLSQVDDCLVKRPPRISPGIADLIKKLKANNTDVFLVSGGFRQMIKPVASE 234
Query: 742 LNIPTINIFANRLKFYFNG 798
L IP NI AN+L F +G
Sbjct: 235 LGIPPENIIANQLLFGTSG 253
>12_02_0452 -
19188601-19188726,19189364-19189417,19189493-19189642,
19189994-19190087,19190607-19190710
Length = 175
Score = 98.7 bits (235), Expect = 5e-21
Identities = 47/90 (52%), Positives = 66/90 (73%)
Frame = +1
Query: 529 MGGNMTFQEALKKRLDIIRPNVGQIREFIEKFPVRLTPGITELVKELHERGVIVYLVSGG 708
M G++ F++AL RL + +P++GQ+ + +EK P R++PGI ELVK L + V VYLVSGG
Sbjct: 1 MTGSVPFEKALAARLSLFKPSLGQVEDCMEKRPPRISPGIAELVKMLKAKNVDVYLVSGG 60
Query: 709 FRSLIEPVAERLNIPTINIFANRLKFYFNG 798
FR +I+PVA +L IP NIFAN+L F +G
Sbjct: 61 FRQMIKPVAMQLGIPPENIFANQLLFGTSG 90
>01_07_0175 - 41715304-41716760,41717200-41717500,41718109-41718369
Length = 672
Score = 33.5 bits (73), Expect = 0.20
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +1
Query: 316 LKSNLQYATLKTLSLVSISVMSPQ-QTVQELFRTADCVCFDVDSTVIQDEGIDELAKFCG 492
L N Q T LV +SP Q +++ R AD + +T++QDE + +K
Sbjct: 533 LVHNSQCTVKSTFCLVKAGAVSPLIQILEDDNREADGAVLEALATLMQDEIWENGSKVIE 592
Query: 493 KGDEVKRLTAEAMGGNMTFQE 555
K V L A GN T QE
Sbjct: 593 KASGVHALLRIAEAGNSTSQE 613
>01_05_0314 - 20779862-20780286,20780734-20781286
Length = 325
Score = 33.5 bits (73), Expect = 0.20
Identities = 22/89 (24%), Positives = 42/89 (47%)
Frame = -1
Query: 588 RPDDVQSLLQGFLECHIAAHCFRRQSFNLVSFPAELGQFIDAFILYDGRVYIEANAVRCP 409
+P D++ L + +L H+ A +R S N++ +++D F+ R E
Sbjct: 166 KPKDLKELKEQYLLAHLVAGHWRMAS-NIL-------EYVDNFLFQSLREKDEEEVRIAM 217
Query: 408 EQLLDSLLGRHHADRHQ*ERLQRRVLQVA 322
++L D L +HH +H R+ +L +A
Sbjct: 218 QRLQDDLQKKHHGSQHSVRRIAHELLGIA 246
>06_03_0706 +
23719392-23719641,23720337-23720383,23720988-23721060,
23721323-23721540,23721868-23722170,23722322-23722399,
23723064-23723549,23723875-23724312
Length = 630
Score = 31.9 bits (69), Expect = 0.61
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = -2
Query: 545 VILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSA-VLNNS 399
V+ PP +S + + SSP +N + SMPSS T ES S T +A VL+ S
Sbjct: 486 VLAPPSSS--NAVESSPKIENSGTKSMPSSQHTSESDSATTSAAQVLDKS 533
>05_07_0323 +
29260608-29260836,29262242-29262513,29263349-29263487,
29263581-29263714,29263847-29263970,29264364-29264773
Length = 435
Score = 31.9 bits (69), Expect = 0.61
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = -2
Query: 479 ASSSMPSSCMTVESTSKQTQSAVLNNSWTVCWGDITLIDTSESV 348
A S+P+ ES+S++T++A ++S CWG + L+ +S +
Sbjct: 3 AGRSVPARGRDSESSSRKTKAAASSSSTAGCWGRLPLLISSGGI 46
>03_06_0421 -
33797836-33797992,33798450-33798549,33798646-33798700,
33798965-33799085,33799759-33799856,33800004-33800105,
33800196-33800360,33800441-33800522,33800960-33801117,
33801214-33801339,33801533-33801616,33802011-33802100,
33802188-33802258,33803420-33803513,33803585-33803671,
33804258-33804306,33805450-33805538,33805691-33805756,
33806009-33806071,33806174-33806282,33806376-33806446,
33807212-33807298,33807390-33807535,33808848-33808953,
33809429-33809494,33809672-33809741,33810839-33811206
Length = 959
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +1
Query: 277 MNDTSGLPIAITSLKSNLQYATLKTL-SLVSISVMSPQQTVQELFRTADCVCFDVDSTVI 453
+N +SG+ + + + N+ L L ++S+ + +P+ T+QEL F T++
Sbjct: 245 LNGSSGIAVGMAT---NIPPHNLGELVDVLSVMIENPEATLQELLECMPGPDFPTGGTIV 301
Query: 454 QDEGIDELAKFCGKGDEVKR 513
++GI E K G+G V R
Sbjct: 302 GNQGILEAYK-TGRGRVVMR 320
>12_01_0090 + 717524-719080
Length = 518
Score = 30.3 bits (65), Expect = 1.9
Identities = 28/79 (35%), Positives = 41/79 (51%)
Frame = -2
Query: 644 PGVSLTGNFSMNSLI*PTLGLMMSSLFFKASWNVILPPIASAVSLLTSSPFPQNLASSSM 465
P S G +++L+ LGL+ S F A + LPP SA+SLL +P P L S S+
Sbjct: 13 PRRSAAGGHQLHALL-AKLGLLHRSEFLSALLSR-LPPSPSALSLLLEAP-PAVL-SPSL 68
Query: 464 PSSCMTVESTSKQTQSAVL 408
+ S+S+ SA+L
Sbjct: 69 VCPVIVAFSSSQAPSSALL 87
>02_05_0767 +
31609773-31610174,31610409-31610501,31610608-31610668,
31610797-31610865,31611274-31611440
Length = 263
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -2
Query: 536 PPIASAVSLLTSSPFPQ-NLASSSMPSSCMTV-ESTSKQTQSAVLNNSWTVCW 384
PPI+S++SL+ S+P P +A P + S+S + S+ + S + W
Sbjct: 4 PPISSSLSLMASNPIPSPPVAKPGRPLTVAACSNSSSSSSSSSPSSTSCSAAW 56
>02_02_0109 + 6830802-6833412,6833491-6833861
Length = 993
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 670 HERGVIVYLVSGGFRSLIEPVAERLNIPTINIFANRL 780
H++ +YL + GF IEP LN+ I++ +N L
Sbjct: 266 HKKLQNLYLYANGFTGEIEPNVSALNLVEIDVSSNEL 302
>02_01_0567 -
4168164-4168250,4168672-4168828,4168951-4169090,
4170318-4170456,4170562-4170830,4170914-4171000,
4171259-4171327,4171427-4171455,4171544-4171950,
4172906-4172977,4173150-4173221,4173299-4173370,
4173454-4173519,4173717-4173785,4173866-4173995,
4174846-4174975
Length = 664
Score = 28.3 bits (60), Expect = 7.5
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = -2
Query: 578 MSSLFFKASWNVILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSA 414
+SS F S L ++S +L +PF ++A S+ PSS T ST QT S+
Sbjct: 182 ISSNNFSGSLPPSLGSLSSLTTLKDGNPFNTSIAPSASPSSTPT-GSTPTQTPSS 235
>01_06_0768 -
31829753-31829851,31830454-31830593,31830729-31830818,
31830905-31831059,31831598-31831663,31831862-31831931,
31832299-31832429,31832516-31832702,31832828-31832894
Length = 334
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 640 PGITELVKELHERGVIVYLVSGGFRSLIE 726
PG+ LVK LH GV + L S R I+
Sbjct: 93 PGVERLVKHLHRNGVPLALASNSVRRNID 121
>09_06_0242 -
21806370-21806483,21806574-21806660,21806865-21806917,
21806999-21807140,21807406-21807501,21808617-21808785,
21808859-21808939,21809032-21809106,21810322-21810387,
21811013-21811158,21811898-21812344
Length = 491
Score = 27.9 bits (59), Expect = 9.9
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Frame = -2
Query: 593 TLGLMMSSLFFKASWNVILPPIASAVSLLTSSPFPQNLASSSMPSS-----CMTVESTSK 429
+LG +M+SL K S +LPP+ S + ++PF NL S+ + ++ C T+ S
Sbjct: 319 SLGELMNSL--KVS---VLPPLGSMIITSIAAPFADNLISNGVDTTKVRKICQTIAFLSP 373
Query: 428 QT 423
T
Sbjct: 374 AT 375
>08_02_0657 - 19749835-19751942,19753123-19753561
Length = 848
Score = 27.9 bits (59), Expect = 9.9
Identities = 22/80 (27%), Positives = 41/80 (51%)
Frame = +1
Query: 484 FCGKGDEVKRLTAEAMGGNMTFQEALKKRLDIIRPNVGQIREFIEKFPVRLTPGITELVK 663
FC +GD VKR E + G + + + +R + QIRE +E P+R P + + +
Sbjct: 194 FCDEGDPVKREDEERLDG-PGYDD-----VGGVRKQLAQIRELVE-LPLR-HPKLFQTLG 245
Query: 664 ELHERGVIVYLVSGGFRSLI 723
+G+++Y G ++L+
Sbjct: 246 VRPPKGILLYGPPGTGKTLL 265
>04_03_0036 -
9950353-9950379,9950753-9950791,9951021-9951194,
9951287-9951415,9951782-9952012,9952655-9952732,
9953035-9953055,9953790-9953855,9953935-9954015,
9954148-9954920,9955461-9955654,9956723-9956817,
9958190-9958219,9958334-9958453,9959185-9959262,
9959428-9959505,9960459-9960488,9960614-9960739,
9961239-9961379,9963416-9963532,9963619-9963670,
9963759-9963890,9964668-9964720,9964816-9964911,
9965255-9965260,9965416-9965561,9966494-9966629,
9966885-9967038,9968017-9968154,9968268-9968614
Length = 1295
Score = 27.9 bits (59), Expect = 9.9
Identities = 21/76 (27%), Positives = 35/76 (46%)
Frame = -1
Query: 618 LNEFSDLTDVRPDDVQSLLQGFLECHIAAHCFRRQSFNLVSFPAELGQFIDAFILYDGRV 439
LN FS D P+ +S Q L+ A S ++V F + G+ + ++YDGRV
Sbjct: 349 LNNFSSHPDGSPEISKSNFQVELDAAKATWL----SNDIVMFSTKAGEMLLLTVVYDGRV 404
Query: 438 YIEANAVRCPEQLLDS 391
+ ++ +L S
Sbjct: 405 VQRLDLMKSKASVLSS 420
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,998,406
Number of Sequences: 37544
Number of extensions: 381269
Number of successful extensions: 1155
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1153
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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