Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1c09
(776 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006696-3|AAF39984.1| 391|Caenorhabditis elegans Hypothetical ... 254 7e-68
AL117205-8|CAB55167.1| 444|Caenorhabditis elegans Hypothetical ... 69 3e-12
AC024757-4|AAK68429.2| 371|Caenorhabditis elegans Methionine am... 41 0.001
Z46934-11|CAE18043.1| 497|Caenorhabditis elegans Hypothetical p... 31 0.92
Z46934-10|CAD18882.1| 495|Caenorhabditis elegans Hypothetical p... 31 0.92
U67864-1|AAC47313.1| 415|Caenorhabditis elegans MEX-3 protein. 30 1.6
AF003139-9|AAK73872.1| 415|Caenorhabditis elegans Muscle excess... 30 1.6
AF003139-8|AAK73873.2| 443|Caenorhabditis elegans Muscle excess... 30 1.6
Z75955-9|CAB00123.1| 406|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z81086-5|CAB03119.2| 182|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z81485-2|CAB03974.2| 708|Caenorhabditis elegans Hypothetical pr... 28 6.5
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 28 6.5
>AC006696-3|AAF39984.1| 391|Caenorhabditis elegans Hypothetical
protein W08E12.7 protein.
Length = 391
Score = 254 bits (621), Expect = 7e-68
Identities = 117/241 (48%), Positives = 167/241 (69%), Gaps = 3/241 (1%)
Frame = +1
Query: 61 TIAEDLVVTKYKLAGQIVNRVLEQVIAKCVPDASAREICEFGDKLVLEETNKVFKKEKDS 240
T+A D VVTKY++A +I N VL++V+A A A ++C+ GDKL+LE+T K++KKEK+
Sbjct: 22 TLANDAVVTKYQVAAEITNAVLKEVLANIKEGAIAGDLCDLGDKLILEKTGKLYKKEKNF 81
Query: 241 KKGIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVAHTVVVG-- 414
KGIA TC+S++NCICH++P+ SE +LK G + K+DLG HIDG IA AHTVVVG
Sbjct: 82 TKGIAMPTCISIDNCICHYTPLKSEAPVVLKNGQVVKVDLGTHIDGLIATAAHTVVVGAS 141
Query: 415 -ESEVSGRAADVXXXXXXXXXXXXXXXKPGTENYAVTEAIQKISAEYGCKPIEGMLSHQL 591
+++V+G+ AD+ +P TEN +T+ I K +AE+G PIE MLSHQL
Sbjct: 142 KDNKVTGKLADLLRGTHDALEIAIRSLRPDTENTTITKNIDKTAAEFGLTPIENMLSHQL 201
Query: 592 KQFRIDGEKSIIQNPSEAQRKEHEKATLEKYEVYAMDVLISTGEAVGREMDTRCTIYQKT 771
++ IDGEK IIQN E Q+ E EK ++K+E YA+D+L STG+ ++MDTR T+++K
Sbjct: 202 ERNEIDGEKKIIQNSGEKQKGEIEKIKIDKHEAYAIDILFSTGKGQPKDMDTRTTVFRKN 261
Query: 772 D 774
+
Sbjct: 262 E 262
>AL117205-8|CAB55167.1| 444|Caenorhabditis elegans Hypothetical
protein Y116A8A.9 protein.
Length = 444
Score = 69.3 bits (162), Expect = 3e-12
Identities = 63/242 (26%), Positives = 109/242 (45%), Gaps = 5/242 (2%)
Frame = +1
Query: 37 ADEKEVEKTIAEDLVVTKYKLAGQIVNRVLEQVIAKCVPDASAREICEFGDKLVLEETNK 216
++E++ I+ + V Y+ + + +V + V + P + EICE LE T++
Sbjct: 115 SNEEKKALDISYEEVWQDYRRSAEAHRQVRKYVKSWIKPGMTMIEICER-----LETTSR 169
Query: 217 VFKKEKDSKKGIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVA 396
KE+ + G+AF T S+N+C H++P A + +L+ GD+ KID G H+ G + A
Sbjct: 170 RLIKEQGLEAGLAFPTGCSLNHCAAHYTPNAGDTT-VLQYGDVCKIDYGIHVRGRLIDSA 228
Query: 397 HTVVVGES----EVSGRAADVXXXXXXXXXXXXXXXKPGTENYAVTEAIQKISAEYGCKP 564
TV + R A E + ++ Y KP
Sbjct: 229 FTVHFDPKFDPLVEAVREATNAGIKESGIDVRLCDVGEIVEEVMTSHEVELDGKSYVVKP 288
Query: 565 IEGMLSHQLKQFRIDGEKSIIQNPSEAQRKEHEKATLEKYEVYAMDVLISTGEA-VGREM 741
I + H + Q+RI K++ P K E+ +E+ E+YA++ STG+ V +M
Sbjct: 289 IRNLNGHSIAQYRIHAGKTV---PIV---KGGEQTKMEENEIYAIETFGSTGKGYVHDDM 342
Query: 742 DT 747
+T
Sbjct: 343 ET 344
>AC024757-4|AAK68429.2| 371|Caenorhabditis elegans Methionine
aminopeptidase protein 1 protein.
Length = 371
Score = 40.7 bits (91), Expect = 0.001
Identities = 29/109 (26%), Positives = 45/109 (41%)
Frame = +1
Query: 259 STCVSVNNCICHFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVAHTVVVGESEVSGRA 438
S C SVN ICH P + L+ GDL +D+ + GF + T +VG+ +V +
Sbjct: 173 SCCTSVNEVICHGIPDMRK----LENGDLCNVDVTVYHRGFHGDLNETFLVGD-KVDEES 227
Query: 439 ADVXXXXXXXXXXXXXXXKPGTENYAVTEAIQKISAEYGCKPIEGMLSH 585
+ KPG + + IQK + G ++G H
Sbjct: 228 RKLVKVTFECLQQAIAIVKPGVKFREIGNVIQKHANANGFSVVKGYCGH 276
>Z46934-11|CAE18043.1| 497|Caenorhabditis elegans Hypothetical
protein ZK1320.12b protein.
Length = 497
Score = 31.1 bits (67), Expect = 0.92
Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 2/121 (1%)
Frame = +1
Query: 7 FSQKSQS*EMADEKEVEKTIAEDLVVTKYKLAGQIVNRVLEQVIAKCVPDASAREICEFG 186
F Q+ ++ + K V K++ + +++K++L Q VL C+ A I +FG
Sbjct: 273 FRDLVQTNDIDEVKNVSKSLYDKGLISKHEL--QSGTEVL------CMSSDGAL-IDQFG 323
Query: 187 DKLVLEETNKVFKKEKD--SKKGIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKIDL 360
+++ L ET + ++KD SK +TC + + PI D +++ D +DL
Sbjct: 324 ERVYLSETTSIDLEDKDRVSKSSTRMTTCGDGAESLRYHWPIDEMLDELIEL-DSCTMDL 382
Query: 361 G 363
G
Sbjct: 383 G 383
>Z46934-10|CAD18882.1| 495|Caenorhabditis elegans Hypothetical
protein ZK1320.12a protein.
Length = 495
Score = 31.1 bits (67), Expect = 0.92
Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 2/121 (1%)
Frame = +1
Query: 7 FSQKSQS*EMADEKEVEKTIAEDLVVTKYKLAGQIVNRVLEQVIAKCVPDASAREICEFG 186
F Q+ ++ + K V K++ + +++K++L Q VL C+ A I +FG
Sbjct: 273 FRDLVQTNDIDEVKNVSKSLYDKGLISKHEL--QSGTEVL------CMSSDGAL-IDQFG 323
Query: 187 DKLVLEETNKVFKKEKD--SKKGIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKIDL 360
+++ L ET + ++KD SK +TC + + PI D +++ D +DL
Sbjct: 324 ERVYLSETTSIDLEDKDRVSKSSTRMTTCGDGAESLRYHWPIDEMLDELIEL-DSCTMDL 382
Query: 361 G 363
G
Sbjct: 383 G 383
>U67864-1|AAC47313.1| 415|Caenorhabditis elegans MEX-3 protein.
Length = 415
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -1
Query: 233 FSFLKTLLVSSNTSLSPNSHISLADASGTHFAMTCSRTRFTICPAN 96
F L T+ N +LSP S LA AS + + TC T+ P N
Sbjct: 372 FGLLSTIWSGGNMNLSPGS---LASASASPTSSTCDHNDHTLVPIN 414
>AF003139-9|AAK73872.1| 415|Caenorhabditis elegans Muscle excess
protein 3, isoform a protein.
Length = 415
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -1
Query: 233 FSFLKTLLVSSNTSLSPNSHISLADASGTHFAMTCSRTRFTICPAN 96
F L T+ N +LSP S LA AS + + TC T+ P N
Sbjct: 372 FGLLSTIWSGGNMNLSPGS---LASASASPTSSTCDHNDHTLVPIN 414
>AF003139-8|AAK73873.2| 443|Caenorhabditis elegans Muscle excess
protein 3, isoform b protein.
Length = 443
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -1
Query: 233 FSFLKTLLVSSNTSLSPNSHISLADASGTHFAMTCSRTRFTICPAN 96
F L T+ N +LSP S LA AS + + TC T+ P N
Sbjct: 400 FGLLSTIWSGGNMNLSPGS---LASASASPTSSTCDHNDHTLVPIN 442
>Z75955-9|CAB00123.1| 406|Caenorhabditis elegans Hypothetical
protein R07B7.14 protein.
Length = 406
Score = 29.1 bits (62), Expect = 3.7
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +1
Query: 175 CEFGDKLVLEETNKVFKKEKDSKKGIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKI 354
C+FGDK + E +K+ K FS C + +P+A + + I KKG++ K+
Sbjct: 72 CKFGDKCL--EDHKIPKPGTRLCGSCRFSKCEQMG-----MNPMAIKSEIISKKGNILKM 124
Query: 355 DL-GAHIDGFIAVVAHTVVVGE 417
+L H IAV + E
Sbjct: 125 ELVKKHNRQLIAVTKEIAIDDE 146
>Z81086-5|CAB03119.2| 182|Caenorhabditis elegans Hypothetical
protein F53B6.5 protein.
Length = 182
Score = 28.7 bits (61), Expect = 4.9
Identities = 22/70 (31%), Positives = 35/70 (50%)
Frame = +1
Query: 559 KPIEGMLSHQLKQFRIDGEKSIIQNPSEAQRKEHEKATLEKYEVYAMDVLISTGEAVGRE 738
KPI + + Q RI EK++ P K E+A +E+ E+YA++ STG+ +
Sbjct: 38 KPIGSLNGQSIAQCRIHTEKTV---PIV---KGGEQARMEENEIYAIETFGSTGKGYFHD 91
Query: 739 MDTRCTIYQK 768
D + Y K
Sbjct: 92 -DMETSHYMK 100
>Z81485-2|CAB03974.2| 708|Caenorhabditis elegans Hypothetical
protein C49F5.2 protein.
Length = 708
Score = 28.3 bits (60), Expect = 6.5
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -1
Query: 686 SYFSSVAFSCSLRCASDGFC 627
+Y+++V F+CS +CA G C
Sbjct: 423 TYYNTVGFACSPKCACKGAC 442
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -3
Query: 498 RLQETKSRFTSMMSCQQNICSTSRDFTFTHNYCMSYNSYKSINVSTK 358
RL + S +T+ +C Q C T + T+T C+ N + +TK
Sbjct: 709 RLLSSWSEWTTTGTCNQTACGTCQTLTYTRT-CLKTNGCFCMGSATK 754
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.132 0.371
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,351,065
Number of Sequences: 27780
Number of extensions: 367570
Number of successful extensions: 1327
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1323
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -