Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1c05
         (702 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC017959-1|AAH17959.1|  291|Homo sapiens chromosome 2 open readi...    40   0.009
AK026208-1|BAB15393.1|  291|Homo sapiens protein ( Homo sapiens ...    40   0.009
AC097717-3|AAY24163.1|  291|Homo sapiens unknown protein.              40   0.009
BC030246-1|AAH30246.1|  559|Homo sapiens major facilitator super...    30   9.2  
AY358401-1|AAQ88767.1|  560|Homo sapiens MYL5 protein.                 30   9.2  
AK025922-1|BAB15283.1|  441|Homo sapiens protein ( Homo sapiens ...    30   9.2  

>BC017959-1|AAH17959.1|  291|Homo sapiens chromosome 2 open reading
           frame 47 protein.
          Length = 291

 Score = 39.9 bits (89), Expect = 0.009
 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
 Frame = +3

Query: 480 KLILL--QNPIKWLMIKIDFSVLRNVWDPTFEEKDFKYGTKQAISRVTQVISDGQFSELN 653
           K+I+L   NPI W+  +I   ++   +D  F   +F  G KQA + V++++S  +F  L 
Sbjct: 109 KMIVLGFSNPINWVRTRIKAFLIWAYFDKEFSITEFSEGAKQAFAHVSKLLSQCKFDLLE 168

Query: 654 GLLTKAARLSLLRE 695
            L+ K   L  L+E
Sbjct: 169 ELVAKEV-LHALKE 181


>AK026208-1|BAB15393.1|  291|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22555 fis, clone HSI01193. ).
          Length = 291

 Score = 39.9 bits (89), Expect = 0.009
 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
 Frame = +3

Query: 480 KLILL--QNPIKWLMIKIDFSVLRNVWDPTFEEKDFKYGTKQAISRVTQVISDGQFSELN 653
           K+I+L   NPI W+  +I   ++   +D  F   +F  G KQA + V++++S  +F  L 
Sbjct: 109 KMIVLGFSNPINWVRTRIKAFLIWAYFDKEFSITEFSEGAKQAFAHVSKLLSQCKFDLLE 168

Query: 654 GLLTKAARLSLLRE 695
            L+ K   L  L+E
Sbjct: 169 ELVAKEV-LHALKE 181


>AC097717-3|AAY24163.1|  291|Homo sapiens unknown protein.
          Length = 291

 Score = 39.9 bits (89), Expect = 0.009
 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
 Frame = +3

Query: 480 KLILL--QNPIKWLMIKIDFSVLRNVWDPTFEEKDFKYGTKQAISRVTQVISDGQFSELN 653
           K+I+L   NPI W+  +I   ++   +D  F   +F  G KQA + V++++S  +F  L 
Sbjct: 109 KMIVLGFSNPINWVRTRIKAFLIWAYFDKEFSITEFSEGAKQAFAHVSKLLSQCKFDLLE 168

Query: 654 GLLTKAARLSLLRE 695
            L+ K   L  L+E
Sbjct: 169 ELVAKEV-LHALKE 181


>BC030246-1|AAH30246.1|  559|Homo sapiens major facilitator
           superfamily domain containing 7 protein.
          Length = 559

 Score = 29.9 bits (64), Expect = 9.2
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -2

Query: 221 TTC*RIQSPYIFNWNSHLAPMAIMLLFYSCIFNILFHT 108
           +TC + + P   +W   L  MA +  F+SCI  + FHT
Sbjct: 408 STCQQGEDP--LDWTVSLLLMAGLCTFFSCILAVFFHT 443


>AY358401-1|AAQ88767.1|  560|Homo sapiens MYL5 protein.
          Length = 560

 Score = 29.9 bits (64), Expect = 9.2
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -2

Query: 221 TTC*RIQSPYIFNWNSHLAPMAIMLLFYSCIFNILFHT 108
           +TC + + P   +W   L  MA +  F+SCI  + FHT
Sbjct: 409 STCQQGEDP--LDWTVSLLLMAGLCTFFSCILAVFFHT 444


>AK025922-1|BAB15283.1|  441|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22269 fis, clone HRC03179. ).
          Length = 441

 Score = 29.9 bits (64), Expect = 9.2
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -2

Query: 221 TTC*RIQSPYIFNWNSHLAPMAIMLLFYSCIFNILFHT 108
           +TC + + P   +W   L  MA +  F+SCI  + FHT
Sbjct: 290 STCQQGEDP--LDWTVSLLLMAGLCTFFSCILAVFFHT 325


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,088,862
Number of Sequences: 237096
Number of extensions: 1808103
Number of successful extensions: 2715
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2715
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)