Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1c03
         (267 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-1204|AAF54559.2| 2762|Drosophila melanogaster CG14692-P...    26   6.3  
AB010263-1|BAA32691.1|  286|Drosophila melanogaster TM4SF protein.     26   8.3  

>AE014297-1204|AAF54559.2| 2762|Drosophila melanogaster CG14692-PA
           protein.
          Length = 2762

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +2

Query: 107 LQQLKHKTK*IREIRRTNFVLSHVLHTNEEYRKQN 211
           + + K ++K I E+  T  VL  ++H+  +  KQN
Sbjct: 859 MPEAKKESKSIDELETTKEVLEDIIHSETDLSKQN 893


>AB010263-1|BAA32691.1|  286|Drosophila melanogaster TM4SF protein.
          Length = 286

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 10/35 (28%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = -1

Query: 180 KTWDKTKLVLLISLIYFVLCF-NCCSINLKTTCFL 79
           K W    ++L +  + F+LC+  C + N +  C L
Sbjct: 49  KLWAPAAILLCLGTVTFILCWMGCQATNQRKRCLL 83


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,516,674
Number of Sequences: 53049
Number of extensions: 113683
Number of successful extensions: 272
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 272
length of database: 24,988,368
effective HSP length: 67
effective length of database: 21,434,085
effective search space used: 450115785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)