Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1c03
(267 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 23 0.49
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 23 0.49
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 23 0.49
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 23 0.49
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 22 1.5
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 22 1.5
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 20 4.6
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 20 4.6
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 20 6.1
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 19 8.0
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 19 8.0
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 19 8.0
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 23.4 bits (48), Expect = 0.49
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = +2
Query: 140 REIRRTNFVLSHVLHTNEEYRKQNYH 217
RE + + +L++ +H N Y+K Y+
Sbjct: 299 REPKIISSLLNNTIHNNNNYKKLQYY 324
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.4 bits (48), Expect = 0.49
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = +2
Query: 140 REIRRTNFVLSHVLHTNEEYRKQNYH 217
RE + + +L++ +H N Y+K Y+
Sbjct: 310 REPKIISSLLNNTIHNNNNYKKLQYY 335
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.4 bits (48), Expect = 0.49
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = +2
Query: 140 REIRRTNFVLSHVLHTNEEYRKQNYH 217
RE + + +L++ +H N Y+K Y+
Sbjct: 310 REPKIISSLLNNTIHNNNNYKKLQYY 335
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 23.4 bits (48), Expect = 0.49
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = +2
Query: 140 REIRRTNFVLSHVLHTNEEYRKQNYH 217
RE + + +L++ +H N Y+K Y+
Sbjct: 299 REPKIISSLLNNTIHNNNNYKKLQYY 324
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 1.5
Identities = 8/28 (28%), Positives = 14/28 (50%)
Frame = +2
Query: 140 REIRRTNFVLSHVLHTNEEYRKQNYHCY 223
RE + + + + +H N Y NY+ Y
Sbjct: 77 REPKIISSLSNKTIHNNNNYNNNNYNNY 104
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.8 bits (44), Expect = 1.5
Identities = 8/28 (28%), Positives = 14/28 (50%)
Frame = +2
Query: 140 REIRRTNFVLSHVLHTNEEYRKQNYHCY 223
RE + + + + +H N Y NY+ Y
Sbjct: 77 REPKIISSLSNKTIHNNNNYNNNNYNNY 104
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 20.2 bits (40), Expect = 4.6
Identities = 7/26 (26%), Positives = 13/26 (50%)
Frame = +2
Query: 140 REIRRTNFVLSHVLHTNEEYRKQNYH 217
RE + + + + +H N Y NY+
Sbjct: 310 REPKIISSLSNKTIHNNNNYNNNNYN 335
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 20.2 bits (40), Expect = 4.6
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = -1
Query: 141 LIYFVLCFNCCSINLKTT 88
L+ ++LC+ C +KTT
Sbjct: 181 LLVWILCYFCIWKGVKTT 198
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 19.8 bits (39), Expect = 6.1
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +2
Query: 188 NEEYRKQNYHC 220
N+E K N+HC
Sbjct: 58 NKEKSKNNHHC 68
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 19.4 bits (38), Expect = 8.0
Identities = 9/33 (27%), Positives = 13/33 (39%)
Frame = -1
Query: 183 CKTWDKTKLVLLISLIYFVLCFNCCSINLKTTC 85
C W VL ++ FV+ S + T C
Sbjct: 5 CNIWTLAVNVLFVNSFLFVIAAQDSSGRIFTIC 37
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 19.4 bits (38), Expect = 8.0
Identities = 9/33 (27%), Positives = 13/33 (39%)
Frame = -1
Query: 183 CKTWDKTKLVLLISLIYFVLCFNCCSINLKTTC 85
C W VL ++ FV+ S + T C
Sbjct: 5 CNIWTLAVNVLFVNSFLFVIAAQDSSGRIFTIC 37
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 19.4 bits (38), Expect = 8.0
Identities = 9/33 (27%), Positives = 13/33 (39%)
Frame = -1
Query: 183 CKTWDKTKLVLLISLIYFVLCFNCCSINLKTTC 85
C W VL ++ FV+ S + T C
Sbjct: 5 CNIWTLAVNVLFVNSFLFVIAAQDSSGRIFTIC 37
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,276
Number of Sequences: 438
Number of extensions: 778
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used: 5012760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)
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