Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1c02
         (709 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41272-4|AAA82448.2|  349|Caenorhabditis elegans Hypothetical pr...    89   4e-18
Z67995-3|CAI79213.1|  150|Caenorhabditis elegans Hypothetical pr...    32   0.35 
Z81577-1|CAB04651.3|  289|Caenorhabditis elegans Hypothetical pr...    30   1.9  
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen...    29   2.5  
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z81502-2|CAB04106.2|  720|Caenorhabditis elegans Hypothetical pr...    28   5.7  
U80839-17|AAB37921.1|  372|Caenorhabditis elegans Serpentine rec...    28   7.5  
Z71258-3|CAA95778.1|  187|Caenorhabditis elegans Hypothetical pr...    27   9.9  
Z68879-1|CAA93081.1|  850|Caenorhabditis elegans Hypothetical pr...    27   9.9  
U61949-8|AAU05569.1|  332|Caenorhabditis elegans Hypothetical pr...    27   9.9  
U61949-7|AAB03155.1|  510|Caenorhabditis elegans Hypothetical pr...    27   9.9  

>U41272-4|AAA82448.2|  349|Caenorhabditis elegans Hypothetical
           protein T03G11.3 protein.
          Length = 349

 Score = 88.6 bits (210), Expect = 4e-18
 Identities = 47/135 (34%), Positives = 68/135 (50%)
 Frame = +2

Query: 251 CGVCGRHFASDRIAKHQEICKKAHSKKRKPFDVLKHRLAGTEAEPFINKLRKTTATPSTT 430
           C +C R F    + KH+  C+K  S  RKPFD  K R +G++       ++K     +  
Sbjct: 23  CPICDRRFIKSSLEKHESACRKLASLHRKPFDSGKQRASGSDLT--YADIKKVQHEKNKN 80

Query: 431 KVNKGKQLNSNWRQKHEEFIQAIRAAKQVQAHLNAGGKLSDLXXXXXSENPDYVQCPHCN 610
                 +  +NWR++H  FI A+ ++K+V   L  G  L        +   DYVQC +C+
Sbjct: 81  G-GVFPRPQTNWRERHGNFIDAVSSSKRVDYALKTGAPLPP--PPKTAVPSDYVQCEYCS 137

Query: 611 RRFNQGAAERHIPKC 655
           R FN  AAERHIP C
Sbjct: 138 RNFNAAAAERHIPFC 152



 Score = 28.7 bits (61), Expect = 4.3
 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = +2

Query: 596 CPHCNRRFNQGAAERHIPKCANFQ--FNKPKPAAKRR*PG 709
           CP C+RRF + + E+H   C        KP  + K+R  G
Sbjct: 23  CPICDRRFIKSSLEKHESACRKLASLHRKPFDSGKQRASG 62


>Z67995-3|CAI79213.1|  150|Caenorhabditis elegans Hypothetical
           protein M153.4 protein.
          Length = 150

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +2

Query: 251 CGVCGRHFASDRIAKHQEIC-KKAHSKKRKPFDVLKHRLAGTEAEPFI 391
           C +CGR F S  IA H+  C KK H++  K     K R A  + E  I
Sbjct: 39  CFICGRQFGSKSIAIHEPQCLKKWHAENEK-LPKSKRRAAPVKPEAVI 85



 Score = 27.9 bits (59), Expect = 7.5
 Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 5/74 (6%)
 Frame = +2

Query: 449 QLNSNWRQKHEEFIQAIRAAKQV--QAHLNAGGKL-SDLXXXXXSENPD--YVQCPHCNR 613
           Q    W  ++E+  ++ R A  V  +A +   G+L ++       +N     V+C HC R
Sbjct: 57  QCLKKWHAENEKLPKSKRRAAPVKPEAVIGDDGRLDAEATNEVLWKNAQGLMVECEHCGR 116

Query: 614 RFNQGAAERHIPKC 655
           +FN+     H   C
Sbjct: 117 KFNEDRLSVHQRSC 130



 Score = 27.9 bits (59), Expect = 7.5
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +2

Query: 251 CGVCGRHFASDRIAKHQEIC 310
           C  CGR F  DR++ HQ  C
Sbjct: 111 CEHCGRKFNEDRLSVHQRSC 130


>Z81577-1|CAB04651.3|  289|Caenorhabditis elegans Hypothetical
           protein R11.1 protein.
          Length = 289

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +2

Query: 338 PFDVLKHRLAGTEAEPFINKLRKTTATPSTTKVNKG 445
           PFDV K R+ G + +PF  K   T  T S     +G
Sbjct: 217 PFDVAKSRIQGPQPDPFTRKYSGTMQTISLVYKEEG 252


>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element
           on autosome protein2 protein.
          Length = 1758

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +2

Query: 593 QCPHCNRRF-NQGAAERHIPKCANFQFNKPKPAA 691
           QCP+CNR   N    +RH   C + Q   P+ AA
Sbjct: 318 QCPNCNRNLANARNLQRHRQTCGSAQHAAPQLAA 351


>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical
           protein F58G4.1 protein.
          Length = 1974

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +2

Query: 359 RLAGTEAEPFINKLRKTTATPSTTKVNKGKQLNS-NW 466
           +L   E+E FIN L K      T  VNKG+ L+  NW
Sbjct: 384 KLYCVESEKFINALLKPRVKVGTEWVNKGQNLDQVNW 420


>Z81502-2|CAB04106.2|  720|Caenorhabditis elegans Hypothetical
           protein F14B6.2 protein.
          Length = 720

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
 Frame = +2

Query: 269 HFASDRIAKHQEICKKAHSKKRKPFDVLKHRLAGTEAEPFINKLRKTTATPST--TKVNK 442
           HF   +  K  E  K+   +K+K    LK     TEAE  +N    T+  P T  ++  K
Sbjct: 251 HFDLLKELKKDEEEKEKKKEKKKKGKGLKKAKKLTEAEKLLNNSTSTSVIPDTAVSRKPK 310

Query: 443 GKQLNSN 463
           GK L  +
Sbjct: 311 GKGLKKS 317


>U80839-17|AAB37921.1|  372|Caenorhabditis elegans Serpentine
           receptor, class w protein97 protein.
          Length = 372

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -2

Query: 408 VLRNLLIKGSASVPAKRCLSTSKGFLFLLWAFL 310
           ++R ++IK  A++   +C     GFL + W FL
Sbjct: 138 LIRYVIIKFGATMKFDKCSKPRFGFLVIFWCFL 170


>Z71258-3|CAA95778.1|  187|Caenorhabditis elegans Hypothetical
           protein C01H6.3 protein.
          Length = 187

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +2

Query: 581 PDYVQCPHCNRRFNQGAAERHIPKC 655
           P +++CPHC R +++ +   H   C
Sbjct: 2   PTFLECPHCQRLYSKHSLLIHEKNC 26


>Z68879-1|CAA93081.1|  850|Caenorhabditis elegans Hypothetical
           protein K08F4.1 protein.
          Length = 850

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 18/61 (29%), Positives = 28/61 (45%)
 Frame = +2

Query: 299 QEICKKAHSKKRKPFDVLKHRLAGTEAEPFINKLRKTTATPSTTKVNKGKQLNSNWRQKH 478
           Q IC+++    +     LK      E E   +++ K T TPS  + NK    +S W  K+
Sbjct: 215 QSICQESERLSK-----LKEESRVKEQEAEFSRMLKETETPSEYENNKSHPESSLWVNKY 269

Query: 479 E 481
           E
Sbjct: 270 E 270


>U61949-8|AAU05569.1|  332|Caenorhabditis elegans Hypothetical
           protein F49E8.7b protein.
          Length = 332

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = -2

Query: 525 CACTCFAARIAWMNSSCFCRQLLFNCLPLF 436
           C+    AARI W +   F    LFNC PLF
Sbjct: 132 CSSIEDAARIEWDDEDVFTSTTLFNC-PLF 160


>U61949-7|AAB03155.1|  510|Caenorhabditis elegans Hypothetical
           protein F49E8.7a protein.
          Length = 510

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = -2

Query: 525 CACTCFAARIAWMNSSCFCRQLLFNCLPLF 436
           C+    AARI W +   F    LFNC PLF
Sbjct: 310 CSSIEDAARIEWDDEDVFTSTTLFNC-PLF 338


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,464,943
Number of Sequences: 27780
Number of extensions: 271833
Number of successful extensions: 952
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 950
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)