Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1b23
(748 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC032841-1|AAH32841.1| 419|Homo sapiens leucine rich repeat con... 48 3e-05
BC040339-1|AAH40339.1| 953|Homo sapiens NOD1 protein protein. 34 0.47
AF149774-1|AAD43922.1| 953|Homo sapiens NOD1 protein protein. 34 0.47
AF126484-1|AAD29125.1| 953|Homo sapiens CARD4 protein. 34 0.47
AF113925-1|AAD28350.1| 953|Homo sapiens Nod1 protein. 34 0.47
AC006027-1|AAS46897.1| 953|Homo sapiens unknown protein. 34 0.47
BC121160-1|AAI21161.1| 462|Homo sapiens chromosome 14 open read... 33 1.4
BC121159-1|AAI21160.1| 462|Homo sapiens chromosome 14 open read... 33 1.4
X82260-1|CAA57714.1| 587|Homo sapiens RanGAP1 protein. 32 1.9
CR456557-1|CAG30443.1| 587|Homo sapiens RANGAP1 protein. 32 1.9
BC041396-1|AAH41396.1| 587|Homo sapiens RANGAP1 protein protein. 32 1.9
BC014044-1|AAH14044.1| 587|Homo sapiens Ran GTPase activating p... 32 1.9
AL035681-3|CAB63073.1| 587|Homo sapiens Ran GTPase activating p... 32 1.9
AB058738-1|BAB47464.1| 623|Homo sapiens KIAA1835 protein protein. 32 1.9
EF452236-1|ABO40479.1| 1866|Homo sapiens NOD4 protein. 32 2.5
BC063566-1|AAH63566.1| 837|Homo sapiens NLRC5 protein protein. 32 2.5
AK027416-1|BAB55098.1| 753|Homo sapiens protein ( Homo sapiens ... 32 2.5
AK027414-1|BAB55096.1| 753|Homo sapiens protein ( Homo sapiens ... 32 2.5
AF389420-1|AAO59377.1| 1866|Homo sapiens NOD27 protein. 32 2.5
AF111169-4|AAD44364.1| 608|Homo sapiens unknown protein. 32 2.5
>BC032841-1|AAH32841.1| 419|Homo sapiens leucine rich repeat
containing 34 protein.
Length = 419
Score = 48.4 bits (110), Expect = 3e-05
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Frame = +1
Query: 295 RITDFDICAICRYIRELKLRVTKIDLCYNKITDXXXXXXXXXXXXXXXXXXXDLNIMNNE 474
R+T D + + ++ L + +D+ YN + D LN+M N+
Sbjct: 93 RVTGEDFWILSKILKNC-LYINGLDVGYNLLCDVGAYYAAKLLQKQLNLIY--LNLMFND 149
Query: 475 LTDKSVLHLSKYAQFIK-LKYLRLNGNDIGTKGGEYFADFLENNTSLERCDIG 630
+ + ++K + LKYLR+ GN I KGG +FA L+ N+SLE+ D+G
Sbjct: 150 IGPEGGELIAKVLHKNRTLKYLRMTGNKIENKGGMFFAAMLQINSSLEKLDLG 202
Score = 30.7 bits (66), Expect = 5.8
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1
Query: 526 LKYLRLNGNDIGTKGGEYFADFLENNTSLERCDI 627
L+YL ++ N I G Y AD L++NT+LE D+
Sbjct: 251 LRYLDVSCNKITHDGMVYLADVLKSNTTLEVIDL 284
>BC040339-1|AAH40339.1| 953|Homo sapiens NOD1 protein protein.
Length = 953
Score = 34.3 bits (75), Expect = 0.47
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 1/111 (0%)
Frame = +1
Query: 286 YNRRITDFDICAICRYIRELKLRVTKIDLCYNKITDXXXXXXXXXXXXXXXXXXXDLNIM 465
YN +ITD + + + E K +T + L NKIT ++ +
Sbjct: 764 YNNQITDVGARYVTKILDECK-GLTHLKLGKNKITSEGGKYLALAVKNSKSIS--EVGMW 820
Query: 466 NNELTDKSVLHLSKYAQ-FIKLKYLRLNGNDIGTKGGEYFADFLENNTSLE 615
N++ D+ ++ + L L L N I T+GG+ A L+ NTSLE
Sbjct: 821 GNQVGDEGAKAFAEALRNHPSLTTLSLASNGISTEGGKSLARALQQNTSLE 871
Score = 32.3 bits (70), Expect = 1.9
Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 1/116 (0%)
Frame = +1
Query: 295 RITDFDICAICRYIRELKLRVTKIDLCYNKITDXXXXXXXXXXXXXXXXXXXDLNIMNNE 474
+ITD + + + + K+ VT + L N+ITD L + N+
Sbjct: 739 QITDGGVKVLSEELTKYKI-VTYLGLYNNQITDVGARYVTKILDECKGLTH--LKLGKNK 795
Query: 475 LTDKSVLHLSKYAQFIK-LKYLRLNGNDIGTKGGEYFADFLENNTSLERCDIGQSG 639
+T + +L+ + K + + + GN +G +G + FA+ L N+ SL + +G
Sbjct: 796 ITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNG 851
>AF149774-1|AAD43922.1| 953|Homo sapiens NOD1 protein protein.
Length = 953
Score = 34.3 bits (75), Expect = 0.47
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 1/111 (0%)
Frame = +1
Query: 286 YNRRITDFDICAICRYIRELKLRVTKIDLCYNKITDXXXXXXXXXXXXXXXXXXXDLNIM 465
YN +ITD + + + E K +T + L NKIT ++ +
Sbjct: 764 YNNQITDVGARYVTKILDECK-GLTHLKLGKNKITSEGGKYLALAVKNSKSIS--EVGMW 820
Query: 466 NNELTDKSVLHLSKYAQ-FIKLKYLRLNGNDIGTKGGEYFADFLENNTSLE 615
N++ D+ ++ + L L L N I T+GG+ A L+ NTSLE
Sbjct: 821 GNQVGDEGAKAFAEALRNHPSLTTLSLASNGISTEGGKSLARALQQNTSLE 871
Score = 32.3 bits (70), Expect = 1.9
Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 1/116 (0%)
Frame = +1
Query: 295 RITDFDICAICRYIRELKLRVTKIDLCYNKITDXXXXXXXXXXXXXXXXXXXDLNIMNNE 474
+ITD + + + + K+ VT + L N+ITD L + N+
Sbjct: 739 QITDGGVKVLSEELTKYKI-VTYLGLYNNQITDVGARYVTKILDECKGLTH--LKLGKNK 795
Query: 475 LTDKSVLHLSKYAQFIK-LKYLRLNGNDIGTKGGEYFADFLENNTSLERCDIGQSG 639
+T + +L+ + K + + + GN +G +G + FA+ L N+ SL + +G
Sbjct: 796 ITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNG 851
>AF126484-1|AAD29125.1| 953|Homo sapiens CARD4 protein.
Length = 953
Score = 34.3 bits (75), Expect = 0.47
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 1/111 (0%)
Frame = +1
Query: 286 YNRRITDFDICAICRYIRELKLRVTKIDLCYNKITDXXXXXXXXXXXXXXXXXXXDLNIM 465
YN +ITD + + + E K +T + L NKIT ++ +
Sbjct: 764 YNNQITDVGARYVTKILDECK-GLTHLKLGKNKITSEGGKYLALAVKNSKSIS--EVGMW 820
Query: 466 NNELTDKSVLHLSKYAQ-FIKLKYLRLNGNDIGTKGGEYFADFLENNTSLE 615
N++ D+ ++ + L L L N I T+GG+ A L+ NTSLE
Sbjct: 821 GNQVGDEGAKAFAEALRNHPSLTTLSLASNGISTEGGKSLARALQQNTSLE 871
Score = 32.3 bits (70), Expect = 1.9
Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 1/116 (0%)
Frame = +1
Query: 295 RITDFDICAICRYIRELKLRVTKIDLCYNKITDXXXXXXXXXXXXXXXXXXXDLNIMNNE 474
+ITD + + + + K+ VT + L N+ITD L + N+
Sbjct: 739 QITDGGVKVLSEELTKYKI-VTYLGLYNNQITDVGARYVTKILDECKGLTH--LKLGKNK 795
Query: 475 LTDKSVLHLSKYAQFIK-LKYLRLNGNDIGTKGGEYFADFLENNTSLERCDIGQSG 639
+T + +L+ + K + + + GN +G +G + FA+ L N+ SL + +G
Sbjct: 796 ITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNG 851
>AF113925-1|AAD28350.1| 953|Homo sapiens Nod1 protein.
Length = 953
Score = 34.3 bits (75), Expect = 0.47
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 1/111 (0%)
Frame = +1
Query: 286 YNRRITDFDICAICRYIRELKLRVTKIDLCYNKITDXXXXXXXXXXXXXXXXXXXDLNIM 465
YN +ITD + + + E K +T + L NKIT ++ +
Sbjct: 764 YNNQITDVGARYVTKILDECK-GLTHLKLGKNKITSEGGKYLALAVKNSKSIS--EVGMW 820
Query: 466 NNELTDKSVLHLSKYAQ-FIKLKYLRLNGNDIGTKGGEYFADFLENNTSLE 615
N++ D+ ++ + L L L N I T+GG+ A L+ NTSLE
Sbjct: 821 GNQVGDEGAKAFAEALRNHPSLTTLSLASNGISTEGGKSLARALQQNTSLE 871
Score = 32.3 bits (70), Expect = 1.9
Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 1/116 (0%)
Frame = +1
Query: 295 RITDFDICAICRYIRELKLRVTKIDLCYNKITDXXXXXXXXXXXXXXXXXXXDLNIMNNE 474
+ITD + + + + K+ VT + L N+ITD L + N+
Sbjct: 739 QITDGGVKVLSEELTKYKI-VTYLGLYNNQITDVGARYVTKILDECKGLTH--LKLGKNK 795
Query: 475 LTDKSVLHLSKYAQFIK-LKYLRLNGNDIGTKGGEYFADFLENNTSLERCDIGQSG 639
+T + +L+ + K + + + GN +G +G + FA+ L N+ SL + +G
Sbjct: 796 ITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNG 851
>AC006027-1|AAS46897.1| 953|Homo sapiens unknown protein.
Length = 953
Score = 34.3 bits (75), Expect = 0.47
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 1/111 (0%)
Frame = +1
Query: 286 YNRRITDFDICAICRYIRELKLRVTKIDLCYNKITDXXXXXXXXXXXXXXXXXXXDLNIM 465
YN +ITD + + + E K +T + L NKIT ++ +
Sbjct: 764 YNNQITDVGARYVTKILDECK-GLTHLKLGKNKITSEGGKYLALAVKNSKSIS--EVGMW 820
Query: 466 NNELTDKSVLHLSKYAQ-FIKLKYLRLNGNDIGTKGGEYFADFLENNTSLE 615
N++ D+ ++ + L L L N I T+GG+ A L+ NTSLE
Sbjct: 821 GNQVGDEGAKAFAEALRNHPSLTTLSLASNGISTEGGKSLARALQQNTSLE 871
Score = 32.3 bits (70), Expect = 1.9
Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 1/116 (0%)
Frame = +1
Query: 295 RITDFDICAICRYIRELKLRVTKIDLCYNKITDXXXXXXXXXXXXXXXXXXXDLNIMNNE 474
+ITD + + + + K+ VT + L N+ITD L + N+
Sbjct: 739 QITDGGVKVLSEELTKYKI-VTYLGLYNNQITDVGARYVTKILDECKGLTH--LKLGKNK 795
Query: 475 LTDKSVLHLSKYAQFIK-LKYLRLNGNDIGTKGGEYFADFLENNTSLERCDIGQSG 639
+T + +L+ + K + + + GN +G +G + FA+ L N+ SL + +G
Sbjct: 796 ITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNG 851
>BC121160-1|AAI21161.1| 462|Homo sapiens chromosome 14 open reading
frame 166B protein.
Length = 462
Score = 32.7 bits (71), Expect = 1.4
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = +1
Query: 526 LKYLRLNGNDIGTKGGEYFADFLENNTSLERCDIGQSGQTLTSVAYIVTALRIDHGANQY 705
L YL + GNDIG +G + LE+N SL + + + ++ A++
Sbjct: 278 LVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPINMDGAILLILAIK--RNPKSR 335
Query: 706 LKVLDLSRVV 735
++ LD+S V+
Sbjct: 336 MEELDISNVL 345
Score = 30.7 bits (66), Expect = 5.8
Identities = 35/137 (25%), Positives = 50/137 (36%)
Frame = +1
Query: 220 FTERNSDGTGSLVLRGNDIFQRYNRRITDFDICAICRYIRELKLRVTKIDLCYNKITDXX 399
F ERNS SL L GND + D A+ ++ K+DL +N+ +D
Sbjct: 158 FFERNSSSIWSLELSGNDFKE---------DSAALLCQALSTNYQIKKLDLSHNQFSDVG 208
Query: 400 XXXXXXXXXXXXXXXXXDLNIMNNELTDKSVLHLSKYAQFIKLKYLRLNGNDIGTKGGEY 579
DL+ NN T +V + + L L L+ N G +
Sbjct: 209 GEHLGQMLAINVGLTSLDLS-WNNFHTRGAVALCNGLRGNVTLTKLDLSMNGFGNEVALA 267
Query: 580 FADFLENNTSLERCDIG 630
+ L N L DIG
Sbjct: 268 LGEVLRLNRCLVYLDIG 284
>BC121159-1|AAI21160.1| 462|Homo sapiens chromosome 14 open reading
frame 166B protein.
Length = 462
Score = 32.7 bits (71), Expect = 1.4
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = +1
Query: 526 LKYLRLNGNDIGTKGGEYFADFLENNTSLERCDIGQSGQTLTSVAYIVTALRIDHGANQY 705
L YL + GNDIG +G + LE+N SL + + + ++ A++
Sbjct: 278 LVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPINMDGAILLILAIK--RNPKSR 335
Query: 706 LKVLDLSRVV 735
++ LD+S V+
Sbjct: 336 MEELDISNVL 345
Score = 30.7 bits (66), Expect = 5.8
Identities = 35/137 (25%), Positives = 50/137 (36%)
Frame = +1
Query: 220 FTERNSDGTGSLVLRGNDIFQRYNRRITDFDICAICRYIRELKLRVTKIDLCYNKITDXX 399
F ERNS SL L GND + D A+ ++ K+DL +N+ +D
Sbjct: 158 FFERNSSSIWSLELSGNDFKE---------DSAALLCQALSTNYQIKKLDLSHNQFSDVG 208
Query: 400 XXXXXXXXXXXXXXXXXDLNIMNNELTDKSVLHLSKYAQFIKLKYLRLNGNDIGTKGGEY 579
DL+ NN T +V + + L L L+ N G +
Sbjct: 209 GEHLGQMLAINVGLTSLDLS-WNNFHTRGAVALCNGLRGNVTLTKLDLSMNGFGNEVALA 267
Query: 580 FADFLENNTSLERCDIG 630
+ L N L DIG
Sbjct: 268 LGEVLRLNRCLVYLDIG 284
>X82260-1|CAA57714.1| 587|Homo sapiens RanGAP1 protein.
Length = 587
Score = 32.3 bits (70), Expect = 1.9
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 499 LSKYAQFIKLKYLRLNGNDIGTKGGEYFADFLENNTSLERC 621
+ + F L+ LRL GN +G + A LE + L+RC
Sbjct: 42 IKEIEDFDSLEALRLEGNTVGVEAARVIAKALEKKSELKRC 82
>CR456557-1|CAG30443.1| 587|Homo sapiens RANGAP1 protein.
Length = 587
Score = 32.3 bits (70), Expect = 1.9
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 499 LSKYAQFIKLKYLRLNGNDIGTKGGEYFADFLENNTSLERC 621
+ + F L+ LRL GN +G + A LE + L+RC
Sbjct: 42 IKEIEDFDSLEALRLEGNTVGVEAARVIAKALEKKSELKRC 82
>BC041396-1|AAH41396.1| 587|Homo sapiens RANGAP1 protein protein.
Length = 587
Score = 32.3 bits (70), Expect = 1.9
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 499 LSKYAQFIKLKYLRLNGNDIGTKGGEYFADFLENNTSLERC 621
+ + F L+ LRL GN +G + A LE + L+RC
Sbjct: 42 IKEIEDFDSLEALRLEGNTVGVEAARVIAKALEKKSELKRC 82
>BC014044-1|AAH14044.1| 587|Homo sapiens Ran GTPase activating
protein 1 protein.
Length = 587
Score = 32.3 bits (70), Expect = 1.9
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 499 LSKYAQFIKLKYLRLNGNDIGTKGGEYFADFLENNTSLERC 621
+ + F L+ LRL GN +G + A LE + L+RC
Sbjct: 42 IKEIEDFDSLEALRLEGNTVGVEAARVIAKALEKKSELKRC 82
>AL035681-3|CAB63073.1| 587|Homo sapiens Ran GTPase activating
protein 1 protein.
Length = 587
Score = 32.3 bits (70), Expect = 1.9
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 499 LSKYAQFIKLKYLRLNGNDIGTKGGEYFADFLENNTSLERC 621
+ + F L+ LRL GN +G + A LE + L+RC
Sbjct: 42 IKEIEDFDSLEALRLEGNTVGVEAARVIAKALEKKSELKRC 82
>AB058738-1|BAB47464.1| 623|Homo sapiens KIAA1835 protein protein.
Length = 623
Score = 32.3 bits (70), Expect = 1.9
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 499 LSKYAQFIKLKYLRLNGNDIGTKGGEYFADFLENNTSLERC 621
+ + F L+ LRL GN +G + A LE + L+RC
Sbjct: 78 IKEIEDFDSLEALRLEGNTVGVEAARVIAKALEKKSELKRC 118
>EF452236-1|ABO40479.1| 1866|Homo sapiens NOD4 protein.
Length = 1866
Score = 31.9 bits (69), Expect = 2.5
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +1
Query: 463 MNNELTDKSVLHL--SKYAQFIKLKYLRLNGNDIGTKGGEYFADFLENNTSLERCDIGQS 636
+++ L + S L L + +Q L+ LRLN N IG G + ++ L TSLE D+ +
Sbjct: 1557 LSHLLLNSSTLALLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHN 1616
Query: 637 GQTLTSVAYIVTAL 678
V ++ T L
Sbjct: 1617 QIGDAGVQHLATIL 1630
>BC063566-1|AAH63566.1| 837|Homo sapiens NLRC5 protein protein.
Length = 837
Score = 31.9 bits (69), Expect = 2.5
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +1
Query: 463 MNNELTDKSVLHL--SKYAQFIKLKYLRLNGNDIGTKGGEYFADFLENNTSLERCDIGQS 636
+++ L + S L L + +Q L+ LRLN N IG G + ++ L TSLE D+ +
Sbjct: 528 LSHLLLNSSTLALLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHN 587
Query: 637 GQTLTSVAYIVTAL 678
V ++ T L
Sbjct: 588 QIGDAGVQHLATIL 601
>AK027416-1|BAB55098.1| 753|Homo sapiens protein ( Homo sapiens
cDNA FLJ14510 fis, clone NT2RM1000623, weakly similar to
RIBONUCLEASE INHIBITOR. ).
Length = 753
Score = 31.9 bits (69), Expect = 2.5
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +1
Query: 463 MNNELTDKSVLHL--SKYAQFIKLKYLRLNGNDIGTKGGEYFADFLENNTSLERCDIGQS 636
+++ L + S L L + +Q L+ LRLN N IG G + ++ L TSLE D+ +
Sbjct: 444 LSHLLLNSSTLALLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHN 503
Query: 637 GQTLTSVAYIVTAL 678
V ++ T L
Sbjct: 504 QIGDAGVQHLATIL 517
>AK027414-1|BAB55096.1| 753|Homo sapiens protein ( Homo sapiens
cDNA FLJ14508 fis, clone NT2RM1000421, weakly similar to
RIBONUCLEASE INHIBITOR. ).
Length = 753
Score = 31.9 bits (69), Expect = 2.5
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +1
Query: 463 MNNELTDKSVLHL--SKYAQFIKLKYLRLNGNDIGTKGGEYFADFLENNTSLERCDIGQS 636
+++ L + S L L + +Q L+ LRLN N IG G + ++ L TSLE D+ +
Sbjct: 444 LSHLLLNSSTLALLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHN 503
Query: 637 GQTLTSVAYIVTAL 678
V ++ T L
Sbjct: 504 QIGDAGVQHLATIL 517
>AF389420-1|AAO59377.1| 1866|Homo sapiens NOD27 protein.
Length = 1866
Score = 31.9 bits (69), Expect = 2.5
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +1
Query: 463 MNNELTDKSVLHL--SKYAQFIKLKYLRLNGNDIGTKGGEYFADFLENNTSLERCDIGQS 636
+++ L + S L L + +Q L+ LRLN N IG G + ++ L TSLE D+ +
Sbjct: 1557 LSHLLLNSSTLALLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHN 1616
Query: 637 GQTLTSVAYIVTAL 678
V ++ T L
Sbjct: 1617 QIGDAGVQHLATIL 1630
>AF111169-4|AAD44364.1| 608|Homo sapiens unknown protein.
Length = 608
Score = 31.9 bits (69), Expect = 2.5
Identities = 19/72 (26%), Positives = 35/72 (48%)
Frame = +1
Query: 526 LKYLRLNGNDIGTKGGEYFADFLENNTSLERCDIGQSGQTLTSVAYIVTALRIDHGANQY 705
L YL + GNDIG +G + LE+N SL + + + ++ A++
Sbjct: 246 LVYLDIGGNDIGNEGASKISKGLESNESLRVLKLFLNPINMDGAILLILAIK--RNPKSR 303
Query: 706 LKVLDLSRVVPL 741
++ LD+S ++ L
Sbjct: 304 MEELDISALLVL 315
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,846,364
Number of Sequences: 237096
Number of extensions: 1793351
Number of successful extensions: 3447
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3446
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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