Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1b22
         (732 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0529 - 21788132-21788395,21788414-21788511,21789458-217899...    30   1.6  
10_06_0084 - 10477880-10477897,10477940-10478002,10479523-104795...    28   6.6  
02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,671...    28   6.6  
03_06_0206 - 32353308-32353566,32353784-32354024,32354408-323546...    28   8.8  

>06_03_0529 -
           21788132-21788395,21788414-21788511,21789458-21789953,
           21790033-21790134,21790218-21790270,21790354-21790414,
           21790491-21790640,21791298-21791350,21794125-21794152
          Length = 434

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -1

Query: 273 TAYCSNSFIEYDLFALRPVHMSCSLYFGMFRVLAVYFDSIF 151
           T   SN+++      L  + M+C+LY+G  R+L   F S F
Sbjct: 167 THLASNTYLVGHSVTLADIVMTCNLYYGFVRILIKSFTSEF 207


>10_06_0084 -
           10477880-10477897,10477940-10478002,10479523-10479575,
           10479774-10480589,10480889-10480998,10481338-10482068
          Length = 596

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
 Frame = -2

Query: 368 YTIRSDKRNSILRVIDKI*PVEIYTRSTLCKQLHTAVILLSNTTYSPSDLCICRA-PCIS 192
           YT+  +   ++  V D++ P  ++  ST C  L      LS   +S S LC       I 
Sbjct: 211 YTVLIEHLANVGEVFDQM-PTMLFVTSTFCTALSLCTQYLSEVLHSLSHLCSTSCEEKIE 269

Query: 191 ACFEFWQFILI 159
               FW  + I
Sbjct: 270 QLLAFWNTLYI 280


>02_02_0095 +
           6716327-6716335,6717302-6717451,6717523-6717583,
           6717646-6717725,6717802-6717903,6717982-6718471,
           6718796-6719171,6720320-6720379,6720887-6721056,
           6721287-6721340,6721384-6721523,6722362-6722511,
           6722582-6722642,6722705-6722784,6722933-6723034,
           6723111-6723612,6724401-6724776,6725419-6725493,
           6726058-6726198,6726264-6726282
          Length = 1065

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -1

Query: 273 TAYCSNSFIEYDLFALRPVHMSCSLYFGMFRVLAVYFDSIF 151
           T   SN+++      L  + M+C+LY G  R++   F S F
Sbjct: 152 THLASNTYLVGHSVTLADIVMTCNLYMGFARIMTKSFTSEF 192



 Score = 28.3 bits (60), Expect = 6.6
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -1

Query: 273 TAYCSNSFIEYDLFALRPVHMSCSLYFGMFRVLAVYFDSIF 151
           T   SN+++      L  + M+C+LY G  R++   F S F
Sbjct: 713 THLASNTYLVGHSVTLADIVMTCNLYMGFARIMTKNFTSEF 753


>03_06_0206 -
           32353308-32353566,32353784-32354024,32354408-32354627,
           32354981-32355316,32355632-32355688,32355787-32355810
          Length = 378

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = -3

Query: 511 VESSLNCSFSSKRWQSLFYVTKKKSSLYRN*NK*L*ISKQQPLGAK 374
           ++ S N SFS+K W       + K++  R+ NK L +S QQ   +K
Sbjct: 26  IQGSNNISFSNKSWVGTTLAWESKATRPRHANKVLCMSVQQASESK 71


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,572,623
Number of Sequences: 37544
Number of extensions: 278706
Number of successful extensions: 500
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 500
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)