Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1b22
         (732 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83218-7|CAB05685.2|  283|Caenorhabditis elegans Hypothetical pr...    31   0.64 
Z81139-8|CAB03483.2|  361|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z81062-15|CAB02950.2|  361|Caenorhabditis elegans Hypothetical p...    29   4.5  
Z81041-6|CAB02788.1|  336|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z81029-2|CAB02696.1|  220|Caenorhabditis elegans Hypothetical pr...    28   5.9  
U53339-7|AAA96203.1|  345|Caenorhabditis elegans Serpentine rece...    28   5.9  
AC199166-1|ABO33245.1|  343|Caenorhabditis elegans F-box a prote...    28   5.9  
AC006675-2|AAK84549.1|  333|Caenorhabditis elegans Serpentine re...    28   5.9  
Z79605-5|CAB01907.2|  316|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z32679-9|CAA83593.3|  337|Caenorhabditis elegans Hypothetical pr...    28   7.8  
AC199172-5|ABO33273.1|  305|Caenorhabditis elegans F-box a prote...    28   7.8  
AC199172-2|ABO33275.1|  305|Caenorhabditis elegans F-box a prote...    28   7.8  

>Z83218-7|CAB05685.2|  283|Caenorhabditis elegans Hypothetical
           protein C31A11.3 protein.
          Length = 283

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
 Frame = -1

Query: 207 CSLYFGMFRVLAVYFDSIFILFYVMLFIMIPL*NI--LLYFAFGLDGLY 67
           C+L+   F + A + + I +LF ++   +IP+ +   L+Y+ FG+D  Y
Sbjct: 8   CNLFAVFFAMFACFLN-IILLFSILYLKLIPIKSSMSLIYYKFGIDAFY 55


>Z81139-8|CAB03483.2|  361|Caenorhabditis elegans Hypothetical
           protein W05H5.7 protein.
          Length = 361

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
 Frame = -3

Query: 211 VVLLVFRHVSSFGSLF*FNFYFILCDAIYHDSI-VEYIIIFCIWLG 77
           ++ LVF ++S F  L   + Y +L   I+H ++ + YI +FC+W G
Sbjct: 34  IIELVF-YISCF-HLMTISLYVMLKVQIFHRNLYILYIPMFCVWYG 77


>Z81062-15|CAB02950.2|  361|Caenorhabditis elegans Hypothetical
           protein W05H5.7 protein.
          Length = 361

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
 Frame = -3

Query: 211 VVLLVFRHVSSFGSLF*FNFYFILCDAIYHDSI-VEYIIIFCIWLG 77
           ++ LVF ++S F  L   + Y +L   I+H ++ + YI +FC+W G
Sbjct: 34  IIELVF-YISCF-HLMTISLYVMLKVQIFHRNLYILYIPMFCVWYG 77


>Z81041-6|CAB02788.1|  336|Caenorhabditis elegans Hypothetical
           protein C27A7.7 protein.
          Length = 336

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -3

Query: 106 YIIIFCIWLGWFVRVRLQ 53
           + I FCIW+GW ++ +L+
Sbjct: 211 FTICFCIWIGWTIQSKLK 228


>Z81029-2|CAB02696.1|  220|Caenorhabditis elegans Hypothetical
           protein C01A2.2 protein.
          Length = 220

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
 Frame = -1

Query: 258 NSFIEY----DLFALRPVHMSCS--LYFGMFRVLAVYFDSIFILFYVMLFIMIPL*NILL 97
           N FI++    DL     V + C   L++G+ +   V+F S F++FY+  FI+  +  IL 
Sbjct: 93  NPFIDHLEIIDLIFAFLVGLPCHILLFYGLQKSKKVFF-SPFLVFYMTNFILNCIFTILT 151

Query: 96  YFAFGLD 76
             AF +D
Sbjct: 152 LGAFAMD 158


>U53339-7|AAA96203.1|  345|Caenorhabditis elegans Serpentine
           receptor, class b (beta)protein 13 protein.
          Length = 345

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 16/57 (28%), Positives = 27/57 (47%)
 Frame = -1

Query: 252 FIEYDLFALRPVHMSCSLYFGMFRVLAVYFDSIFILFYVMLFIMIPL*NILLYFAFG 82
           F ++  F++    +   +YF   R+  +YF        +  FI I L  ++L FAFG
Sbjct: 23  FSQFYTFSVSSFAVPGLIYFMFKRLFQLYFHGNLKTLLIAYFISILLYAVMLCFAFG 79


>AC199166-1|ABO33245.1|  343|Caenorhabditis elegans F-box a protein
           protein 6 protein.
          Length = 343

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = -2

Query: 407 INF-KTTTFRSKTGYTIRSDKRNSIL-RVIDKI*PVEIYTRSTLCKQLHTAVI 255
           INF +   F+     T+ SD    IL +V++K+ PV+  T   +CK L  AV+
Sbjct: 26  INFVRYMNFQDHISPTL-SDMPTEILGQVLEKLKPVDQLTHLKICKSLRAAVV 77


>AC006675-2|AAK84549.1|  333|Caenorhabditis elegans Serpentine
           receptor, class h protein34 protein.
          Length = 333

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
 Frame = +2

Query: 245 SIKELLQYAVA----YTAYCVCRSLPVIFYLLLGVYYFVCQTVWC 367
           +IK +  +++A    +T YCV    P  F  L  + YF C  V C
Sbjct: 17  TIKRVFAFSIAIIFPFTHYCVLTKSPKSFGFLKWIIYFHCCCVTC 61


>Z79605-5|CAB01907.2|  316|Caenorhabditis elegans Hypothetical
           protein ZK678.6 protein.
          Length = 316

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 12/55 (21%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
 Frame = -3

Query: 160 FNFYFILCDAIYHDSIVEYIII-----FCIWLGWFVRVRLQRNVNYYFLLQHIDH 11
           F  + I    +Y  S    +I       C++L  ++ +R++ + N  FLL+ +++
Sbjct: 38  FTLFLIAFGKVYKSSFYTLVIFDLSTNICVYLNTWIAIRIEMHPNLVFLLKAVEY 92


>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical
           protein F07A11.4 protein.
          Length = 1095

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 483 LRNAGKACFMLQKKKVLCIEIEINDYKFQNN 391
           LRN G  CFM    ++L   IE+ +Y  +N+
Sbjct: 425 LRNIGNTCFMNAVLQMLVNNIELREYFLRNH 455


>Z32679-9|CAA83593.3|  337|Caenorhabditis elegans Hypothetical
           protein C05B5.5 protein.
          Length = 337

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 16/64 (25%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
 Frame = -2

Query: 332 RVIDKI*PVEIYTRSTLCKQLHTAVILLSNTTYSPSDLCICR-APCISACFEFWQFILIQ 156
           ++ + + P EI+  S + K +H  V +L N  ++  D+ +C     +   F+F   I++ 
Sbjct: 25  KIFEYLNPWEIFKLSRISKAIH--VTILKNKKFAVKDIDLCTDENILKFQFQFVNNIVLS 82

Query: 155 FLFY 144
           + FY
Sbjct: 83  WEFY 86


>AC199172-5|ABO33273.1|  305|Caenorhabditis elegans F-box a protein
           protein 30 protein.
          Length = 305

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = -2

Query: 332 RVIDKI*PVEIYTRSTLCKQLHTAV 258
           +V++K+ PVEI T   +C+ L TA+
Sbjct: 18  QVLEKLGPVEILTCRKVCRNLRTAI 42


>AC199172-2|ABO33275.1|  305|Caenorhabditis elegans F-box a protein
           protein 32 protein.
          Length = 305

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = -2

Query: 332 RVIDKI*PVEIYTRSTLCKQLHTAV 258
           +V++K+ PVEI T   +C+ L TA+
Sbjct: 18  QVLEKLGPVEILTCRKVCRSLRTAI 42


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,761,786
Number of Sequences: 27780
Number of extensions: 301633
Number of successful extensions: 770
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 769
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)