Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1b21
(768 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0089 - 707260-707317,707626-708050,708663-709621,710223-71... 34 0.11
03_06_0163 - 32105234-32105977 33 0.33
03_06_0170 - 32128619-32129647 31 0.77
05_06_0276 + 26878732-26879574,26879920-26880387,26880800-268810... 31 1.3
03_02_0700 - 10517754-10519100 31 1.3
08_02_0066 - 11852258-11852461,11852542-11852957,11853778-11854333 30 1.8
07_01_0056 + 428297-428332,428574-430127,430209-430274 30 1.8
06_03_0097 - 16607936-16608712,16610114-16610320,16611220-166113... 29 3.1
02_02_0284 - 8547126-8547187,8547306-8547395,8547810-8547861,854... 29 3.1
07_01_1206 - 11505450-11506403 29 4.1
11_01_0422 + 3246528-3248606 29 5.4
07_03_1497 - 26990647-26991531,26991609-26991967,26992302-26992371 28 7.1
05_06_0277 + 26885621-26886064,26886148-26886317,26887038-268879... 28 7.1
03_05_0647 + 26390924-26391259 28 7.1
03_01_0270 - 2085461-2086205,2086260-2086339,2086598-2086690,208... 28 7.1
02_05_0919 - 32721734-32722954,32723424-32723729,32724415-32724492 28 7.1
03_04_0198 - 18381668-18381830,18381903-18382060,18382164-183821... 28 9.4
03_02_0507 - 8999902-9000649,9001106-9001225,9001314-9001394,900... 28 9.4
03_02_0328 - 7487759-7488340 28 9.4
02_02_0558 + 11477433-11477525,11477632-11477973,11481854-114823... 28 9.4
>12_01_0089 -
707260-707317,707626-708050,708663-709621,710223-710408,
710502-710604,710701-710883,710932-711012,711072-711164,
711650-711832,713751-713966
Length = 828
Score = 34.3 bits (75), Expect = 0.11
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 6/98 (6%)
Frame = +3
Query: 450 KKRQTKMAHKLKNNHYVATHRSGVD-SPSSGGYLHRASSRDENDSHRAPSERTLSEYTTM 626
+ R++ H +NN Y +G+ +P GYL + +DSHRA T +
Sbjct: 612 QNRRSSNGHS-RNNVYGYAGTNGIGPAPCPPGYLIMRTYSQIDDSHRARGTGTYFPNPNL 670
Query: 627 DERTRSPSGNDHRN-----GRRHQQTNGSPRADSASDV 725
+ RSPSG R HQ+ + RAD ++D+
Sbjct: 671 -SKDRSPSGRGGRGKTHFLSHNHQRPHHYGRADMSADL 707
>03_06_0163 - 32105234-32105977
Length = 247
Score = 32.7 bits (71), Expect = 0.33
Identities = 12/37 (32%), Positives = 26/37 (70%)
Frame = -3
Query: 130 STEQLNVLALHLNNNSCIFRLFIYYVDVISRQWRRAH 20
S ++L ++ L L+++ I+ + ++ +D +S QWRRA+
Sbjct: 205 SEDELYMICLRLDHDFAIYDMTVHRMDFLSLQWRRAY 241
>03_06_0170 - 32128619-32129647
Length = 342
Score = 31.5 bits (68), Expect = 0.77
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = -3
Query: 130 STEQLNVLALHLNNNSCIFRLFIYYVDVISRQWRRA 23
S ++L ++ L ++ I+ + ++ +D +SRQWRRA
Sbjct: 209 SEDELYMVCLRIDYEFTIYDMTVHKMDFLSRQWRRA 244
>05_06_0276 +
26878732-26879574,26879920-26880387,26880800-26881021,
26881153-26881278,26881309-26881573,26881719-26881936
Length = 713
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Frame = +3
Query: 552 RASSRDENDSHRAPSERTLS--EYTTMDERTRSPSGNDHRNGRRHQQTNGSPRADSASD 722
R SRD S T S +Y D R R G+D + R Q+ + R DSA +
Sbjct: 172 RDHSRDRRSDRSGASRETWSSRDYEGRDSRGRRSDGDDQKGICREQRADHDDRKDSARE 230
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Frame = +3
Query: 552 RASSRDENDS---HRAPSERTLSEYTTMDERTRSPSGNDHRN-GRRHQQTNGSPRADSAS 719
RA D DS RA + + E R RS S +HR+ GR Q++ SPR+ ++
Sbjct: 218 RADHDDRKDSARERRADRDESNGESGRSSRRGRSVSPEEHRHRGRHESQSHQSPRSSRSA 277
>03_02_0700 - 10517754-10519100
Length = 448
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/61 (36%), Positives = 29/61 (47%)
Frame = +3
Query: 432 RDLIEKKKRQTKMAHKLKNNHYVATHRSGVDSPSSGGYLHRASSRDENDSHRAPSERTLS 611
+DLIE + R H+ H+ A R G S SSG RA+ RD+ P RTL
Sbjct: 51 QDLIELRHRFISHPHRALAEHHDALSRGGGSSSSSG----RAAQRDDEPD---PPPRTLR 103
Query: 612 E 614
+
Sbjct: 104 D 104
>08_02_0066 - 11852258-11852461,11852542-11852957,11853778-11854333
Length = 391
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -3
Query: 640 RVLSSIVVYSDSVLSEGALWLSFSSLDDALCKYPPDDGESTP 515
R+L+S+ D + +G L+ F S LC+ DDG S P
Sbjct: 346 RLLASVKEIDDIKVEKGRLYAQFISALKKLCRKKMDDGGSAP 387
>07_01_0056 + 428297-428332,428574-430127,430209-430274
Length = 551
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
Frame = +1
Query: 595 RRGRCQSTRQWTKEPDR------RLAMTTGTAGGTSKRTARLGPTPRPMSTSLALPT 747
RRGRC ST ++ P R +++ T +R L P+P P S+S++ T
Sbjct: 33 RRGRCSSTSSRSESPPRKRSKKLKVSDKKSTKNKGRRRHHSLSPSPSPSSSSVSYST 89
>06_03_0097 - 16607936-16608712,16610114-16610320,16611220-16611336,
16611409-16611690,16611811-16612294,16612791-16612929,
16613138-16613243,16613396-16613562,16613632-16613707,
16614173-16614321,16614813-16614874,16615232-16615335,
16616856-16616950,16617046-16617136,16617785-16617922
Length = 997
Score = 29.5 bits (63), Expect = 3.1
Identities = 22/73 (30%), Positives = 29/73 (39%)
Frame = +3
Query: 510 RSGVDSPSSGGYLHRASSRDENDSHRAPSERTLSEYTTMDERTRSPSGNDHRNGRRHQQT 689
RSG S HR+ R + HR + R+ S Y D + HR R H+
Sbjct: 905 RSGTPGSDSSIEHHRSKKRKSHSKHR--TRRSRSPYA--DSSDSQYTKRKHREKRHHRTR 960
Query: 690 NGSPRADSASDVY 728
N P DS+ Y
Sbjct: 961 N--PDTDSSDHEY 971
>02_02_0284 -
8547126-8547187,8547306-8547395,8547810-8547861,
8548209-8548284,8550513-8550632,8553334-8553423,
8553842-8554024,8554125-8554185,8554437-8554477,
8554563-8554727,8555699-8555776,8556137-8556282
Length = 387
Score = 29.5 bits (63), Expect = 3.1
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Frame = +3
Query: 459 QTKMAHKLKNNHYVATHRSGVDSPSSGGYLHRASSRDENDSHRAPSERTLSEYTTMDERT 638
+++ + ++ Y RS SP+ ++S D+HRA S R + +D++
Sbjct: 145 RSRSRSRSRSPRYRGRPRSRSYSPAPRRRDDYSASPQRKDTHRAKSPRRQPKEHEVDKKR 204
Query: 639 RSPSGNDHRNGRRHQQTNG----SPRADS 713
RS S +++G R NG SP ADS
Sbjct: 205 RSYS-PANKDGDRRDADNGYEKRSPPADS 232
>07_01_1206 - 11505450-11506403
Length = 317
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/75 (25%), Positives = 36/75 (48%)
Frame = +3
Query: 447 KKKRQTKMAHKLKNNHYVATHRSGVDSPSSGGYLHRASSRDENDSHRAPSERTLSEYTTM 626
+++RQT+ + + + + R G S S+ GY RD++D + P + +T+
Sbjct: 97 RRRRQTRW--ESEEDAALRRQREGEASTSTSGY---GGGRDDSDDEQPPPASKKRKPSTL 151
Query: 627 DERTRSPSGNDHRNG 671
E R+P +R G
Sbjct: 152 AELYRAPRELTYRGG 166
>11_01_0422 + 3246528-3248606
Length = 692
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +3
Query: 540 GYLHRASSRDENDSHRAPSERTLSEYTTMDERTRSPSGNDHRNGRRHQQTNGSPRAD 710
G LHRA + E++ H + +++ + TRS +G R G G P +D
Sbjct: 171 GVLHRAMAFVEDEFHTMLEDPRVAK-AAQNGDTRSATGKSMRRGPSFNHAGGDPASD 226
>07_03_1497 - 26990647-26991531,26991609-26991967,26992302-26992371
Length = 437
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 553 EHRLEMKTTATEHLRRGRCQSTRQWTKEPDRRL 651
EH M T + RGR ++ R+WT + D L
Sbjct: 20 EHASRMSQTQCSKVVRGRGRNKRKWTADEDEEL 52
>05_06_0277 +
26885621-26886064,26886148-26886317,26887038-26887941,
26888544-26888575,26888862-26888928,26889116-26889173,
26889329-26889421,26890366-26890480,26890847-26890894,
26891012-26891057,26891161-26891231,26891865-26891870,
26891991-26892038,26892439-26892488,26892892-26893154
Length = 804
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Frame = +3
Query: 552 RASSRDENDSHRAPSERTLS--EYTTMDERTRSPSGNDHRNGRRHQQTNGSPRADSASD 722
R SRD S T S + D R R G+D + R Q+ + R DSA +
Sbjct: 399 RDHSRDRRSDRSGASRETWSSRDDERRDSRGRRSDGDDRKVNSREQRADHDDRRDSARE 457
>03_05_0647 + 26390924-26391259
Length = 111
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/60 (26%), Positives = 25/60 (41%)
Frame = +1
Query: 538 EDICTEHRLEMKTTATEHLRRGRCQSTRQWTKEPDRRLAMTTGTAGGTSKRTARLGPTPR 717
E + E L+ + + R R + R W +EP+RR T G R+G P+
Sbjct: 49 EGVAVEALLDGEVGGGRGVARWRVRLERHWQEEPERR-RWTDGDGARARPERRRMGTWPK 107
>03_01_0270 -
2085461-2086205,2086260-2086339,2086598-2086690,
2086774-2086881,2087012-2087101,2087234-2087275,
2087516-2087587,2090848-2090985,2091074-2092624
Length = 972
Score = 28.3 bits (60), Expect = 7.1
Identities = 21/79 (26%), Positives = 37/79 (46%)
Frame = +3
Query: 486 NNHYVATHRSGVDSPSSGGYLHRASSRDENDSHRAPSERTLSEYTTMDERTRSPSGNDHR 665
N+H ++T+ SG S GG ++RD + + + +R + +DE P GND
Sbjct: 179 NSHKLSTYTSGRVGKSRGGNHGEITARDGDATIQESQKRPGKRW--IDE----PVGNDRI 232
Query: 666 NGRRHQQTNGSPRADSASD 722
R ++T+G + D
Sbjct: 233 KERSERRTDGKRNSRGFDD 251
>02_05_0919 - 32721734-32722954,32723424-32723729,32724415-32724492
Length = 534
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -3
Query: 658 SLPDGDRVLSSIVVYSDSVLSEGALWLSFSSLDD 557
S PD +LS I +Y+D E L +F ++DD
Sbjct: 473 SFPDRSLILSGIPMYTDRADLEARLSTTFGAMDD 506
>03_04_0198 -
18381668-18381830,18381903-18382060,18382164-18382199,
18382344-18382439,18382632-18382709,18382921-18383073,
18383261-18383365
Length = 262
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -3
Query: 676 RLPFRWSLPDGDRVLSSIVVYSDSVLSEGALWL 578
R+ WS GDR+LS++V Y ++ +G +W+
Sbjct: 109 RIYLGWSYV-GDRLLSAVVPYEETGWYDGQMWV 140
>03_02_0507 -
8999902-9000649,9001106-9001225,9001314-9001394,
9001591-9001613
Length = 323
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +3
Query: 567 DENDSHRAPSERTLSEYTTMDERTRSPSGNDHRNGRRHQQTNGSP 701
D + ++PS+ + E S S D R+GRR + T SP
Sbjct: 63 DLSPGEKSPSQHSGKETRRKQNNQLSESSEDERDGRRTKHTVDSP 107
>03_02_0328 - 7487759-7488340
Length = 193
Score = 27.9 bits (59), Expect = 9.4
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +1
Query: 598 RGRCQSTRQWTK--EPDRRLAMTTGTAGGTSKRTARLGPTPRPMSTSLALPTDLLRKSV 768
R STRQ + +P R T T GGT K+ TP P + ++A D L + V
Sbjct: 70 RASTPSTRQRDRRRKPSRPPPSTETTKGGTQKKKPLERATPLPPAPAVAEALDDLEQEV 128
>02_02_0558 +
11477433-11477525,11477632-11477973,11481854-11482381,
11482459-11482956
Length = 486
Score = 27.9 bits (59), Expect = 9.4
Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 4/82 (4%)
Frame = +3
Query: 474 HKLKNNHYVAT----HRSGVDSPSSGGYLHRASSRDENDSHRAPSERTLSEYTTMDERTR 641
H L+NN Y A S D GG + +R + R R+ S + + D +R
Sbjct: 232 HPLRNNSYHAQLGERDESDDDVDGDGGKVGE-HARQQQQRQRGNDVRSRSPFRSWDGSSR 290
Query: 642 SPSGNDHRNGRRHQQTNGSPRA 707
+P + RRH RA
Sbjct: 291 TPEEDRAEGVRRHDAAARRERA 312
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,729,303
Number of Sequences: 37544
Number of extensions: 418535
Number of successful extensions: 1368
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1367
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -