Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1b21
         (768 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    23   4.1  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               22   7.2  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    22   7.2  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    21   9.5  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    21   9.5  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    21   9.5  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   9.5  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   9.5  

>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -1

Query: 510 DAWLHNGCSLICAPFLFVFFFSQLNHV 430
           D+ L N    +CAP L VF     NH+
Sbjct: 140 DSGLVNRTVPVCAPKLHVFDLKTSNHL 166


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 81 VYFVYLYITSMLFRANG 31
          V FVY+   +++ RANG
Sbjct: 6  VIFVYILSVAVIIRANG 22


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 432 RDLIEKKKRQTKMAHKLKNNHY 497
           RD+I ++K  TK+   L   HY
Sbjct: 50  RDIIPEQKNATKIDFGLSIQHY 71


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +2

Query: 359 RKKKRENDGQANSND 403
           R   R+ND Q N ND
Sbjct: 515 RNGNRQNDNQNNQND 529


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 483 KNNHYVATHRSGVDSPSSGG 542
           K+N Y A H  G   P+S G
Sbjct: 280 KSNDYYAFHFEGEKGPNSQG 299


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +3

Query: 318 LTDVG*MKKYTIELEK 365
           L+DV   KKY  ELEK
Sbjct: 438 LSDVTPRKKYPFELEK 453


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 124 QLIIKWFNSSDL 159
           Q++ KWFNS D+
Sbjct: 419 QVVGKWFNSLDI 430


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 124 QLIIKWFNSSDL 159
           Q++ KWFNS D+
Sbjct: 509 QVVGKWFNSLDI 520


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,637
Number of Sequences: 438
Number of extensions: 4729
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)