Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1b17
(566 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ422083-1|CAD19444.1| 681|Drosophila melanogaster fragile X re... 138 4e-33
AJ413217-1|CAC88757.2| 529|Drosophila melanogaster fragile X re... 138 4e-33
AJ271221-1|CAB66340.1| 684|Drosophila melanogaster fragile X re... 138 4e-33
AF305881-1|AAG22045.1| 681|Drosophila melanogaster KH domain co... 138 4e-33
AF205597-1|AAF14640.1| 681|Drosophila melanogaster Fragile X re... 138 4e-33
AF205596-1|AAF14639.1| 681|Drosophila melanogaster Fragile X re... 138 4e-33
AE014297-1093|AAN13454.1| 529|Drosophila melanogaster CG6203-PB... 138 4e-33
AE014297-1091|AAF54493.2| 684|Drosophila melanogaster CG6203-PA... 138 4e-33
AE014297-1090|AAN13452.1| 681|Drosophila melanogaster CG6203-PD... 138 4e-33
AE014297-1089|AAN13451.1| 681|Drosophila melanogaster CG6203-PC... 138 4e-33
AE014297-1092|AAN13453.1| 643|Drosophila melanogaster CG6203-PE... 109 3e-24
AY069182-1|AAL39327.2| 577|Drosophila melanogaster GH22839p pro... 52 7e-07
BT003200-1|AAO24955.1| 881|Drosophila melanogaster RE52776p pro... 30 2.5
AY051867-1|AAK93291.1| 507|Drosophila melanogaster LD36294p pro... 30 2.5
AE013599-2980|AAM68400.1| 881|Drosophila melanogaster CG11055-P... 30 2.5
AE013599-2979|AAF57495.1| 881|Drosophila melanogaster CG11055-P... 30 2.5
AE013599-2978|AAF57494.1| 881|Drosophila melanogaster CG11055-P... 30 2.5
BT010044-1|AAQ22513.1| 780|Drosophila melanogaster LD31742p pro... 29 5.8
AJ010150-1|CAB52415.1| 782|Drosophila melanogaster carnitine pa... 29 5.8
AE014298-2781|AAF48895.2| 1868|Drosophila melanogaster CG7282-PA... 29 5.8
AE013599-1111|AAF58786.1| 780|Drosophila melanogaster CG12891-P... 29 5.8
AE013599-1110|AAF58785.2| 780|Drosophila melanogaster CG12891-P... 29 5.8
>AJ422083-1|CAD19444.1| 681|Drosophila melanogaster fragile X
related protein.
Length = 681
Score = 138 bits (335), Expect = 4e-33
Identities = 77/183 (42%), Positives = 107/183 (58%), Gaps = 3/183 (1%)
Frame = +1
Query: 16 MEDLSVEVYGENGAYYKAIVTDVLDNEVLVAFENDWQPES-KFPFSQVFLPPKDTGKHTE 192
MEDL VEV +NGAYYK VT V D+ + V + D PES K+PF V LPP++T +
Sbjct: 1 MEDLLVEVRLDNGAYYKGQVTAVADDGIFV--DVDGVPESMKYPFVNVRLPPEETVEVAA 58
Query: 193 --FTENQEVEVFARSNEKEACGWWTANIKMMRGDFLVIEYLEWDNCYTEIVPKDRLRVKL 366
F E EVEVF R+N++E CGWW IKM + + + Y+ ++ YTEI RLR K
Sbjct: 59 PIFEEGMEVEVFTRTNDRETCGWWVGIIKMRKAEIYAVAYIGFETSYTEICELGRLRAKN 118
Query: 367 PKTPIDKNTFHKFEITVPDELKDYLHDIHSAKVENAHKEFQKAIGAALVWYVPERAVLAV 546
PI TF++F + VP+EL++ A+ + HKEFQ+ I A + Y + L V
Sbjct: 119 SNPPITAKTFYQFTLPVPEELRE------EAQKDGIHKEFQRTIDAGVCNYSRDLDALIV 172
Query: 547 LSR 555
+S+
Sbjct: 173 ISK 175
>AJ413217-1|CAC88757.2| 529|Drosophila melanogaster fragile X
related protein protein.
Length = 529
Score = 138 bits (335), Expect = 4e-33
Identities = 77/183 (42%), Positives = 107/183 (58%), Gaps = 3/183 (1%)
Frame = +1
Query: 16 MEDLSVEVYGENGAYYKAIVTDVLDNEVLVAFENDWQPES-KFPFSQVFLPPKDTGKHTE 192
MEDL VEV +NGAYYK VT V D+ + V + D PES K+PF V LPP++T +
Sbjct: 1 MEDLLVEVRLDNGAYYKGQVTAVADDGIFV--DVDGVPESMKYPFVNVRLPPEETVEVAA 58
Query: 193 --FTENQEVEVFARSNEKEACGWWTANIKMMRGDFLVIEYLEWDNCYTEIVPKDRLRVKL 366
F E EVEVF R+N++E CGWW IKM + + + Y+ ++ YTEI RLR K
Sbjct: 59 PIFEEGMEVEVFTRTNDRETCGWWVGIIKMRKAEIYAVAYIGFETSYTEICELGRLRAKN 118
Query: 367 PKTPIDKNTFHKFEITVPDELKDYLHDIHSAKVENAHKEFQKAIGAALVWYVPERAVLAV 546
PI TF++F + VP+EL++ A+ + HKEFQ+ I A + Y + L V
Sbjct: 119 SNPPITAKTFYQFTLPVPEELRE------EAQKDGIHKEFQRTIDAGVCNYSRDLDALIV 172
Query: 547 LSR 555
+S+
Sbjct: 173 ISK 175
>AJ271221-1|CAB66340.1| 684|Drosophila melanogaster fragile X
related protein protein.
Length = 684
Score = 138 bits (335), Expect = 4e-33
Identities = 77/183 (42%), Positives = 107/183 (58%), Gaps = 3/183 (1%)
Frame = +1
Query: 16 MEDLSVEVYGENGAYYKAIVTDVLDNEVLVAFENDWQPES-KFPFSQVFLPPKDTGKHTE 192
MEDL VEV +NGAYYK VT V D+ + V + D PES K+PF V LPP++T +
Sbjct: 1 MEDLLVEVRLDNGAYYKGQVTAVADDGIFV--DVDGVPESMKYPFVNVRLPPEETVEVAA 58
Query: 193 --FTENQEVEVFARSNEKEACGWWTANIKMMRGDFLVIEYLEWDNCYTEIVPKDRLRVKL 366
F E EVEVF R+N++E CGWW IKM + + + Y+ ++ YTEI RLR K
Sbjct: 59 PIFEEGMEVEVFTRTNDRETCGWWVGIIKMRKAEIYAVAYIGFETSYTEICELGRLRAKN 118
Query: 367 PKTPIDKNTFHKFEITVPDELKDYLHDIHSAKVENAHKEFQKAIGAALVWYVPERAVLAV 546
PI TF++F + VP+EL++ A+ + HKEFQ+ I A + Y + L V
Sbjct: 119 SNPPITAKTFYQFTLPVPEELRE------EAQKDGIHKEFQRTIDAGVCNYSRDLDALIV 172
Query: 547 LSR 555
+S+
Sbjct: 173 ISK 175
>AF305881-1|AAG22045.1| 681|Drosophila melanogaster KH domain
containing RNA-bindingprotein FMR1 protein.
Length = 681
Score = 138 bits (335), Expect = 4e-33
Identities = 77/183 (42%), Positives = 107/183 (58%), Gaps = 3/183 (1%)
Frame = +1
Query: 16 MEDLSVEVYGENGAYYKAIVTDVLDNEVLVAFENDWQPES-KFPFSQVFLPPKDTGKHTE 192
MEDL VEV +NGAYYK VT V D+ + V + D PES K+PF V LPP++T +
Sbjct: 1 MEDLLVEVRLDNGAYYKGQVTAVADDGIFV--DVDGVPESMKYPFVNVRLPPEETVEVAA 58
Query: 193 --FTENQEVEVFARSNEKEACGWWTANIKMMRGDFLVIEYLEWDNCYTEIVPKDRLRVKL 366
F E EVEVF R+N++E CGWW IKM + + + Y+ ++ YTEI RLR K
Sbjct: 59 PIFEEGMEVEVFTRTNDRETCGWWVGIIKMRKAEIYAVAYIGFETSYTEICELGRLRAKN 118
Query: 367 PKTPIDKNTFHKFEITVPDELKDYLHDIHSAKVENAHKEFQKAIGAALVWYVPERAVLAV 546
PI TF++F + VP+EL++ A+ + HKEFQ+ I A + Y + L V
Sbjct: 119 SNPPITAKTFYQFTLPVPEELRE------EAQKDGIHKEFQRTIDAGVCNYSRDLDALIV 172
Query: 547 LSR 555
+S+
Sbjct: 173 ISK 175
>AF205597-1|AAF14640.1| 681|Drosophila melanogaster Fragile X
related protein.
Length = 681
Score = 138 bits (335), Expect = 4e-33
Identities = 77/183 (42%), Positives = 107/183 (58%), Gaps = 3/183 (1%)
Frame = +1
Query: 16 MEDLSVEVYGENGAYYKAIVTDVLDNEVLVAFENDWQPES-KFPFSQVFLPPKDTGKHTE 192
MEDL VEV +NGAYYK VT V D+ + V + D PES K+PF V LPP++T +
Sbjct: 1 MEDLLVEVRLDNGAYYKGQVTAVADDGIFV--DVDGVPESMKYPFVNVRLPPEETVEVAA 58
Query: 193 --FTENQEVEVFARSNEKEACGWWTANIKMMRGDFLVIEYLEWDNCYTEIVPKDRLRVKL 366
F E EVEVF R+N++E CGWW IKM + + + Y+ ++ YTEI RLR K
Sbjct: 59 PIFEEGMEVEVFTRTNDRETCGWWVGIIKMRKAEIYAVAYIGFETSYTEICELGRLRAKN 118
Query: 367 PKTPIDKNTFHKFEITVPDELKDYLHDIHSAKVENAHKEFQKAIGAALVWYVPERAVLAV 546
PI TF++F + VP+EL++ A+ + HKEFQ+ I A + Y + L V
Sbjct: 119 SNPPITAKTFYQFTLPVPEELRE------EAQKDGIHKEFQRTIDAGVCNYSRDLDALIV 172
Query: 547 LSR 555
+S+
Sbjct: 173 ISK 175
>AF205596-1|AAF14639.1| 681|Drosophila melanogaster Fragile X
related protein.
Length = 681
Score = 138 bits (335), Expect = 4e-33
Identities = 77/183 (42%), Positives = 107/183 (58%), Gaps = 3/183 (1%)
Frame = +1
Query: 16 MEDLSVEVYGENGAYYKAIVTDVLDNEVLVAFENDWQPES-KFPFSQVFLPPKDTGKHTE 192
MEDL VEV +NGAYYK VT V D+ + V + D PES K+PF V LPP++T +
Sbjct: 1 MEDLLVEVRLDNGAYYKGQVTAVADDGIFV--DVDGVPESMKYPFVNVRLPPEETVEVAA 58
Query: 193 --FTENQEVEVFARSNEKEACGWWTANIKMMRGDFLVIEYLEWDNCYTEIVPKDRLRVKL 366
F E EVEVF R+N++E CGWW IKM + + + Y+ ++ YTEI RLR K
Sbjct: 59 PIFEEGMEVEVFTRTNDRETCGWWVGIIKMRKAEIYAVAYIGFETSYTEICELGRLRAKN 118
Query: 367 PKTPIDKNTFHKFEITVPDELKDYLHDIHSAKVENAHKEFQKAIGAALVWYVPERAVLAV 546
PI TF++F + VP+EL++ A+ + HKEFQ+ I A + Y + L V
Sbjct: 119 SNPPITAKTFYQFTLPVPEELRE------EAQKDGIHKEFQRTIDAGVCNYSRDLDALIV 172
Query: 547 LSR 555
+S+
Sbjct: 173 ISK 175
>AE014297-1093|AAN13454.1| 529|Drosophila melanogaster CG6203-PB,
isoform B protein.
Length = 529
Score = 138 bits (335), Expect = 4e-33
Identities = 77/183 (42%), Positives = 107/183 (58%), Gaps = 3/183 (1%)
Frame = +1
Query: 16 MEDLSVEVYGENGAYYKAIVTDVLDNEVLVAFENDWQPES-KFPFSQVFLPPKDTGKHTE 192
MEDL VEV +NGAYYK VT V D+ + V + D PES K+PF V LPP++T +
Sbjct: 1 MEDLLVEVRLDNGAYYKGQVTAVADDGIFV--DVDGVPESMKYPFVNVRLPPEETVEVAA 58
Query: 193 --FTENQEVEVFARSNEKEACGWWTANIKMMRGDFLVIEYLEWDNCYTEIVPKDRLRVKL 366
F E EVEVF R+N++E CGWW IKM + + + Y+ ++ YTEI RLR K
Sbjct: 59 PIFEEGMEVEVFTRTNDRETCGWWVGIIKMRKAEIYAVAYIGFETSYTEICELGRLRAKN 118
Query: 367 PKTPIDKNTFHKFEITVPDELKDYLHDIHSAKVENAHKEFQKAIGAALVWYVPERAVLAV 546
PI TF++F + VP+EL++ A+ + HKEFQ+ I A + Y + L V
Sbjct: 119 SNPPITAKTFYQFTLPVPEELRE------EAQKDGIHKEFQRTIDAGVCNYSRDLDALIV 172
Query: 547 LSR 555
+S+
Sbjct: 173 ISK 175
>AE014297-1091|AAF54493.2| 684|Drosophila melanogaster CG6203-PA,
isoform A protein.
Length = 684
Score = 138 bits (335), Expect = 4e-33
Identities = 77/183 (42%), Positives = 107/183 (58%), Gaps = 3/183 (1%)
Frame = +1
Query: 16 MEDLSVEVYGENGAYYKAIVTDVLDNEVLVAFENDWQPES-KFPFSQVFLPPKDTGKHTE 192
MEDL VEV +NGAYYK VT V D+ + V + D PES K+PF V LPP++T +
Sbjct: 1 MEDLLVEVRLDNGAYYKGQVTAVADDGIFV--DVDGVPESMKYPFVNVRLPPEETVEVAA 58
Query: 193 --FTENQEVEVFARSNEKEACGWWTANIKMMRGDFLVIEYLEWDNCYTEIVPKDRLRVKL 366
F E EVEVF R+N++E CGWW IKM + + + Y+ ++ YTEI RLR K
Sbjct: 59 PIFEEGMEVEVFTRTNDRETCGWWVGIIKMRKAEIYAVAYIGFETSYTEICELGRLRAKN 118
Query: 367 PKTPIDKNTFHKFEITVPDELKDYLHDIHSAKVENAHKEFQKAIGAALVWYVPERAVLAV 546
PI TF++F + VP+EL++ A+ + HKEFQ+ I A + Y + L V
Sbjct: 119 SNPPITAKTFYQFTLPVPEELRE------EAQKDGIHKEFQRTIDAGVCNYSRDLDALIV 172
Query: 547 LSR 555
+S+
Sbjct: 173 ISK 175
>AE014297-1090|AAN13452.1| 681|Drosophila melanogaster CG6203-PD,
isoform D protein.
Length = 681
Score = 138 bits (335), Expect = 4e-33
Identities = 77/183 (42%), Positives = 107/183 (58%), Gaps = 3/183 (1%)
Frame = +1
Query: 16 MEDLSVEVYGENGAYYKAIVTDVLDNEVLVAFENDWQPES-KFPFSQVFLPPKDTGKHTE 192
MEDL VEV +NGAYYK VT V D+ + V + D PES K+PF V LPP++T +
Sbjct: 1 MEDLLVEVRLDNGAYYKGQVTAVADDGIFV--DVDGVPESMKYPFVNVRLPPEETVEVAA 58
Query: 193 --FTENQEVEVFARSNEKEACGWWTANIKMMRGDFLVIEYLEWDNCYTEIVPKDRLRVKL 366
F E EVEVF R+N++E CGWW IKM + + + Y+ ++ YTEI RLR K
Sbjct: 59 PIFEEGMEVEVFTRTNDRETCGWWVGIIKMRKAEIYAVAYIGFETSYTEICELGRLRAKN 118
Query: 367 PKTPIDKNTFHKFEITVPDELKDYLHDIHSAKVENAHKEFQKAIGAALVWYVPERAVLAV 546
PI TF++F + VP+EL++ A+ + HKEFQ+ I A + Y + L V
Sbjct: 119 SNPPITAKTFYQFTLPVPEELRE------EAQKDGIHKEFQRTIDAGVCNYSRDLDALIV 172
Query: 547 LSR 555
+S+
Sbjct: 173 ISK 175
>AE014297-1089|AAN13451.1| 681|Drosophila melanogaster CG6203-PC,
isoform C protein.
Length = 681
Score = 138 bits (335), Expect = 4e-33
Identities = 77/183 (42%), Positives = 107/183 (58%), Gaps = 3/183 (1%)
Frame = +1
Query: 16 MEDLSVEVYGENGAYYKAIVTDVLDNEVLVAFENDWQPES-KFPFSQVFLPPKDTGKHTE 192
MEDL VEV +NGAYYK VT V D+ + V + D PES K+PF V LPP++T +
Sbjct: 1 MEDLLVEVRLDNGAYYKGQVTAVADDGIFV--DVDGVPESMKYPFVNVRLPPEETVEVAA 58
Query: 193 --FTENQEVEVFARSNEKEACGWWTANIKMMRGDFLVIEYLEWDNCYTEIVPKDRLRVKL 366
F E EVEVF R+N++E CGWW IKM + + + Y+ ++ YTEI RLR K
Sbjct: 59 PIFEEGMEVEVFTRTNDRETCGWWVGIIKMRKAEIYAVAYIGFETSYTEICELGRLRAKN 118
Query: 367 PKTPIDKNTFHKFEITVPDELKDYLHDIHSAKVENAHKEFQKAIGAALVWYVPERAVLAV 546
PI TF++F + VP+EL++ A+ + HKEFQ+ I A + Y + L V
Sbjct: 119 SNPPITAKTFYQFTLPVPEELRE------EAQKDGIHKEFQRTIDAGVCNYSRDLDALIV 172
Query: 547 LSR 555
+S+
Sbjct: 173 ISK 175
>AE014297-1092|AAN13453.1| 643|Drosophila melanogaster CG6203-PE,
isoform E protein.
Length = 643
Score = 109 bits (261), Expect = 3e-24
Identities = 55/142 (38%), Positives = 81/142 (57%), Gaps = 2/142 (1%)
Frame = +1
Query: 136 KFPFSQVFLPPKDTGKHTE--FTENQEVEVFARSNEKEACGWWTANIKMMRGDFLVIEYL 309
K+PF V LPP++T + F E EVEVF R+N++E CGWW IKM + + + Y+
Sbjct: 2 KYPFVNVRLPPEETVEVAAPIFEEGMEVEVFTRTNDRETCGWWVGIIKMRKAEIYAVAYI 61
Query: 310 EWDNCYTEIVPKDRLRVKLPKTPIDKNTFHKFEITVPDELKDYLHDIHSAKVENAHKEFQ 489
++ YTEI RLR K PI TF++F + VP+EL++ A+ + HKEFQ
Sbjct: 62 GFETSYTEICELGRLRAKNSNPPITAKTFYQFTLPVPEELRE------EAQKDGIHKEFQ 115
Query: 490 KAIGAALVWYVPERAVLAVLSR 555
+ I A + Y + L V+S+
Sbjct: 116 RTIDAGVCNYSRDLDALIVISK 137
>AY069182-1|AAL39327.2| 577|Drosophila melanogaster GH22839p
protein.
Length = 577
Score = 51.6 bits (118), Expect = 7e-07
Identities = 29/77 (37%), Positives = 42/77 (54%)
Frame = +1
Query: 325 YTEIVPKDRLRVKLPKTPIDKNTFHKFEITVPDELKDYLHDIHSAKVENAHKEFQKAIGA 504
YTEI RLR K PI TF++F + VP+EL++ A+ + HKEFQ+ I A
Sbjct: 1 YTEICELGRLRAKNSNPPITAKTFYQFTLPVPEELRE------EAQKDGIHKEFQRTIDA 54
Query: 505 ALVWYVPERAVLAVLSR 555
+ Y + L V+S+
Sbjct: 55 GVCNYSRDLDALIVISK 71
>BT003200-1|AAO24955.1| 881|Drosophila melanogaster RE52776p
protein.
Length = 881
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +1
Query: 88 DNEVLVAFENDWQPESKFPFSQVFLPPKDT 177
DN V+FE+D QP +P PPKDT
Sbjct: 620 DNSSCVSFEDDSQPIVHYPIEISADPPKDT 649
>AY051867-1|AAK93291.1| 507|Drosophila melanogaster LD36294p
protein.
Length = 507
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +1
Query: 88 DNEVLVAFENDWQPESKFPFSQVFLPPKDT 177
DN V+FE+D QP +P PPKDT
Sbjct: 246 DNSSCVSFEDDSQPIVHYPIEISADPPKDT 275
>AE013599-2980|AAM68400.1| 881|Drosophila melanogaster CG11055-PC,
isoform C protein.
Length = 881
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +1
Query: 88 DNEVLVAFENDWQPESKFPFSQVFLPPKDT 177
DN V+FE+D QP +P PPKDT
Sbjct: 620 DNSSCVSFEDDSQPIVHYPIEISADPPKDT 649
>AE013599-2979|AAF57495.1| 881|Drosophila melanogaster CG11055-PB,
isoform B protein.
Length = 881
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +1
Query: 88 DNEVLVAFENDWQPESKFPFSQVFLPPKDT 177
DN V+FE+D QP +P PPKDT
Sbjct: 620 DNSSCVSFEDDSQPIVHYPIEISADPPKDT 649
>AE013599-2978|AAF57494.1| 881|Drosophila melanogaster CG11055-PA,
isoform A protein.
Length = 881
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +1
Query: 88 DNEVLVAFENDWQPESKFPFSQVFLPPKDT 177
DN V+FE+D QP +P PPKDT
Sbjct: 620 DNSSCVSFEDDSQPIVHYPIEISADPPKDT 649
>BT010044-1|AAQ22513.1| 780|Drosophila melanogaster LD31742p
protein.
Length = 780
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +1
Query: 364 LPKTPID--KNTFHKFEITVPDELKDYLHDIHSAKVENAHKEFQKAIGAALVWYV 522
LP+ P+ K+T ++ +V + L D + ++E KEF++ IG L WY+
Sbjct: 171 LPRLPLPSVKDTMTRYLRSV----RPLLDDENYTRMERLAKEFEQTIGKKLQWYL 221
>AJ010150-1|CAB52415.1| 782|Drosophila melanogaster carnitine
palmitoyltransferase I protein.
Length = 782
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +1
Query: 364 LPKTPID--KNTFHKFEITVPDELKDYLHDIHSAKVENAHKEFQKAIGAALVWYV 522
LP+ P+ K+T ++ +V + L D + ++E KEF++ IG L WY+
Sbjct: 171 LPRLPLPSVKDTMTRYLRSV----RPLLDDENYTRMERLAKEFEQTIGKKLQWYL 221
>AE014298-2781|AAF48895.2| 1868|Drosophila melanogaster CG7282-PA
protein.
Length = 1868
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 268 IKMMRG-DFLVIEYLEWDNCYTEIVPKDRLRVKLPK 372
I + RG ++ Y W+N Y E VP++R+ L K
Sbjct: 104 ISVQRGVPMYLVHYTGWNNRYDEWVPRERIAENLTK 139
>AE013599-1111|AAF58786.1| 780|Drosophila melanogaster CG12891-PB,
isoform B protein.
Length = 780
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +1
Query: 364 LPKTPID--KNTFHKFEITVPDELKDYLHDIHSAKVENAHKEFQKAIGAALVWYV 522
LP+ P+ K+T ++ +V + L D + ++E KEF++ IG L WY+
Sbjct: 171 LPRLPLPSVKDTMTRYLRSV----RPLLDDENYTRMERLAKEFEQTIGKKLQWYL 221
>AE013599-1110|AAF58785.2| 780|Drosophila melanogaster CG12891-PA,
isoform A protein.
Length = 780
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +1
Query: 364 LPKTPID--KNTFHKFEITVPDELKDYLHDIHSAKVENAHKEFQKAIGAALVWYV 522
LP+ P+ K+T ++ +V + L D + ++E KEF++ IG L WY+
Sbjct: 171 LPRLPLPSVKDTMTRYLRSV----RPLLDDENYTRMERLAKEFEQTIGKKLQWYL 221
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,585,249
Number of Sequences: 53049
Number of extensions: 580146
Number of successful extensions: 1921
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1882
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2213979693
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -