Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1b11
         (760 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0495 + 22705697-22705765,22705903-22706025,22708429-227085...    33   0.19 
07_01_0789 - 6150257-6151046,6151167-6151390,6151816-6151991,615...    31   1.00 
02_05_1293 - 35520733-35520963,35521696-35521878,35522040-355222...    29   5.3  
01_03_0103 - 12567986-12568141,12568307-12568442,12568751-125688...    29   5.3  
11_06_0642 + 25755000-25755896                                         28   7.0  
08_01_0831 + 8086470-8087354,8087441-8087730,8096373-8096412,809...    28   7.0  
06_03_0160 + 17366392-17367525,17367856-17368206                       28   7.0  

>01_05_0495 + 22705697-22705765,22705903-22706025,22708429-22708586,
            22709162-22709206,22709367-22709445,22709522-22709595,
            22709703-22709809,22711116-22711301,22711882-22711920,
            22712020-22712086,22712207-22712281,22713113-22713347,
            22713425-22713755,22714530-22714710,22714810-22714950,
            22715041-22715302,22715503-22715892,22717179-22717735,
            22718421-22718557,22718672-22718853,22718959-22719339,
            22719420-22719545,22719635-22719700,22720056-22721839,
            22721914-22722193,22722386-22722616,22723067-22723588,
            22723683-22723815,22723937-22724193
          Length = 2405

 Score = 33.5 bits (73), Expect = 0.19
 Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
 Frame = +1

Query: 451  KYDPALAAFRRYYESEYENVEEITLKPRNSLPRLRLPTVKSAPHLNNNVLPNLKDEA--T 624
            K DP +        S++E+V  I+ +    L +L LP++K   +L  NVL ++   A  +
Sbjct: 1755 KLDPFVKLLAECLSSKHESVLSISFRCLALLIKLPLPSLKDNANLIKNVLMDIAQRAGNS 1814

Query: 625  NGFKISAC 648
            NG  +++C
Sbjct: 1815 NGHLVTSC 1822


>07_01_0789 -
           6150257-6151046,6151167-6151390,6151816-6151991,
           6152778-6153801
          Length = 737

 Score = 31.1 bits (67), Expect = 1.00
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
 Frame = +1

Query: 418 VQLWLGLPE-EVKYDPALAAFRRYYESEYENVE------EITLKPRNSLPRLRLPTVKSA 576
           VQLW  + E   ++D  +   ++Y  S Y  ++      +  LKP +S P    P +K  
Sbjct: 518 VQLWNVVHEWHTQFDKFMTYQKQYVGSLYTWIKLNVIPIDTNLKPNSSQPHETTPPIKRV 577

Query: 577 PHLNNNVLPNLKDEA 621
            H  + +L  L DEA
Sbjct: 578 LHAWHEILGKLPDEA 592


>02_05_1293 -
           35520733-35520963,35521696-35521878,35522040-35522255,
           35522936-35523022,35523125-35523331,35523426-35523650,
           35523743-35523798,35524009-35524115,35524443-35525470
          Length = 779

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 18/61 (29%), Positives = 30/61 (49%)
 Frame = +1

Query: 328 KDWSASRNGSSEISKSQYSLVSSGDLTAGAVQLWLGLPEEVKYDPALAAFRRYYESEYEN 507
           K WS++   + ++ K + +L S  +        +  L EE+K    L A RR YES  E+
Sbjct: 278 KKWSSAALRNCDMKKERRALKSYEEENNDLAGSFRELREEIKNREVLGAERRRYESRGES 337

Query: 508 V 510
           +
Sbjct: 338 L 338


>01_03_0103 - 12567986-12568141,12568307-12568442,12568751-12568824,
            12568932-12569175,12569480-12569766,12570618-12571103,
            12571348-12571459,12571540-12571745,12573071-12573276,
            12573831-12574162,12574284-12574825,12574967-12576308,
            12576386-12576457,12578438-12578505,12579011-12580174
          Length = 1808

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = -1

Query: 574  PI*RSVIVTLGGSSSVSALSPQRFHIHFHSSAGTQPVQGHISLLPVIPTIAAQLQ 410
            P+ R+VI++   SS ++   PQ     F    G   ++G +S+LPV   +   LQ
Sbjct: 1188 PLLRNVILSCIESSKINKPEPQHSWNSFALMDGLSALEGLVSILPVKTILRELLQ 1242


>11_06_0642 + 25755000-25755896
          Length = 298

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +2

Query: 185 IYRIFITQMIVNYLHKLPV 241
           +Y+IF   ++VNY H+LPV
Sbjct: 266 MYKIFSNAIVVNYSHQLPV 284


>08_01_0831 +
           8086470-8087354,8087441-8087730,8096373-8096412,
           8096878-8096957,8099643-8099733,8099989-8100052,
           8100553-8100818
          Length = 571

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +2

Query: 185 IYRIFITQMIVNYLHKLPV 241
           +Y+IF   ++VNY H+LPV
Sbjct: 266 MYKIFSNAIVVNYSHQLPV 284


>06_03_0160 + 17366392-17367525,17367856-17368206
          Length = 494

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +1

Query: 535 NSLPRLRLPTVKSAPHLN 588
           NS PRLR  +++ APHLN
Sbjct: 395 NSFPRLRELSIRGAPHLN 412


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,564,574
Number of Sequences: 37544
Number of extensions: 352850
Number of successful extensions: 946
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 946
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)