Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1b11
(760 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81064-7|CAB02960.2| 382|Caenorhabditis elegans Hypothetical pr... 30 1.6
AL031621-7|CAE46665.1| 382|Caenorhabditis elegans Hypothetical ... 30 1.6
Z81102-6|CAB03207.2| 571|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z81102-4|CAB03204.2| 639|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z69659-7|CAA93488.2| 571|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z69659-6|CAA93486.2| 639|Caenorhabditis elegans Hypothetical pr... 28 6.3
U80836-2|AAV58890.1| 454|Caenorhabditis elegans Abnormal catech... 28 6.3
U40029-10|AAN65326.1| 644|Caenorhabditis elegans Hypothetical p... 28 6.3
U40029-9|AAN65325.1| 727|Caenorhabditis elegans Hypothetical pr... 28 6.3
U64849-1|AAC48052.3| 936|Caenorhabditis elegans Daf-12, redunda... 28 8.3
U55370-2|AAA97994.1| 561|Caenorhabditis elegans Hypothetical pr... 28 8.3
>Z81064-7|CAB02960.2| 382|Caenorhabditis elegans Hypothetical
protein F16B12.8 protein.
Length = 382
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +1
Query: 400 DLTAGAVQLWLGLPEEVKYDPALAAFRRYYESEYENVEEITLKPRNSLPRLRLPTVKSAP 579
D + A+Q +L + ++ D F +YY + ++EEI PR R P VK +P
Sbjct: 105 DSSITALQTFLAALK-LRDDHRQTQFMQYYSVDDPSLEEIIANPRVVTMRKTSPDVKLSP 163
Query: 580 H 582
H
Sbjct: 164 H 164
>AL031621-7|CAE46665.1| 382|Caenorhabditis elegans Hypothetical
protein F16B12.8 protein.
Length = 382
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +1
Query: 400 DLTAGAVQLWLGLPEEVKYDPALAAFRRYYESEYENVEEITLKPRNSLPRLRLPTVKSAP 579
D + A+Q +L + ++ D F +YY + ++EEI PR R P VK +P
Sbjct: 105 DSSITALQTFLAALK-LRDDHRQTQFMQYYSVDDPSLEEIIANPRVVTMRKTSPDVKLSP 163
Query: 580 H 582
H
Sbjct: 164 H 164
>Z81102-6|CAB03207.2| 571|Caenorhabditis elegans Hypothetical
protein F07C6.4c protein.
Length = 571
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Frame = +1
Query: 283 KNKCENRMDKILRSVKDWSASRNGSSEISK----SQYSLVSSGDLTAGAVQLWLGLP 441
+N ++ D+ +V+D SR S IS+ +YS VSS ++G+ + LGLP
Sbjct: 236 RNGLDDEKDEFDENVED-RVSRRAPSAISRHSLSQRYSGVSSSSTSSGSDSMGLGLP 291
>Z81102-4|CAB03204.2| 639|Caenorhabditis elegans Hypothetical
protein F07C6.4b protein.
Length = 639
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Frame = +1
Query: 283 KNKCENRMDKILRSVKDWSASRNGSSEISK----SQYSLVSSGDLTAGAVQLWLGLP 441
+N ++ D+ +V+D SR S IS+ +YS VSS ++G+ + LGLP
Sbjct: 304 RNGLDDEKDEFDENVED-RVSRRAPSAISRHSLSQRYSGVSSSSTSSGSDSMGLGLP 359
>Z69659-7|CAA93488.2| 571|Caenorhabditis elegans Hypothetical
protein F07C6.4c protein.
Length = 571
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Frame = +1
Query: 283 KNKCENRMDKILRSVKDWSASRNGSSEISK----SQYSLVSSGDLTAGAVQLWLGLP 441
+N ++ D+ +V+D SR S IS+ +YS VSS ++G+ + LGLP
Sbjct: 236 RNGLDDEKDEFDENVED-RVSRRAPSAISRHSLSQRYSGVSSSSTSSGSDSMGLGLP 291
>Z69659-6|CAA93486.2| 639|Caenorhabditis elegans Hypothetical
protein F07C6.4b protein.
Length = 639
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Frame = +1
Query: 283 KNKCENRMDKILRSVKDWSASRNGSSEISK----SQYSLVSSGDLTAGAVQLWLGLP 441
+N ++ D+ +V+D SR S IS+ +YS VSS ++G+ + LGLP
Sbjct: 304 RNGLDDEKDEFDENVED-RVSRRAPSAISRHSLSQRYSGVSSSSTSSGSDSMGLGLP 359
>U80836-2|AAV58890.1| 454|Caenorhabditis elegans Abnormal
catecholamine distributionprotein 2, isoform b protein.
Length = 454
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +1
Query: 439 PEEVKYDPALAAFRRYYESEYENVEEITLKPRNSLPRLR 555
PE +DPA+ A ++Y + +Y+ + + ++L +LR
Sbjct: 359 PEHKDFDPAVTAVQKYEDDDYQPLYFVADSIHDALAKLR 397
>U40029-10|AAN65326.1| 644|Caenorhabditis elegans Hypothetical
protein F10G7.9b protein.
Length = 644
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = +1
Query: 490 ESEYENVEEITLKPRNSLPRLRLPTVKSAPHLN 588
E EYE VEE P N P L L V S P +N
Sbjct: 463 EDEYEEVEEPPSTPLNPTPDLILNDVVSDPIVN 495
>U40029-9|AAN65325.1| 727|Caenorhabditis elegans Hypothetical
protein F10G7.9a protein.
Length = 727
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = +1
Query: 490 ESEYENVEEITLKPRNSLPRLRLPTVKSAPHLN 588
E EYE VEE P N P L L V S P +N
Sbjct: 546 EDEYEEVEEPPSTPLNPTPDLILNDVVSDPIVN 578
>U64849-1|AAC48052.3| 936|Caenorhabditis elegans Daf-12, redundant
with protein 1 protein.
Length = 936
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +2
Query: 149 STVNYLKNYFINIYRIFITQMIVNYLHKLPVFVPVKKEF*FRKRIRINVKTEWTKS 316
S+V+Y N N + ++ Y +++P+F P +F FR++ R W +S
Sbjct: 186 SSVSYRFNQISNSHEVWKELYCNLYDYRIPLFHPSHAKFEFREQSRWRDGNPWKES 241
>U55370-2|AAA97994.1| 561|Caenorhabditis elegans Hypothetical
protein K03B4.6 protein.
Length = 561
Score = 27.9 bits (59), Expect = 8.3
Identities = 8/21 (38%), Positives = 16/21 (76%)
Frame = +3
Query: 72 LNIEKQNSVYNCYFSLKCQQN 134
++ +K + +NCY S+KCQ++
Sbjct: 296 VDFQKNAATFNCYTSIKCQES 316
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,315,217
Number of Sequences: 27780
Number of extensions: 323227
Number of successful extensions: 957
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 956
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -