Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1b07
(730 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0155 - 17321982-17322214,17323550-17323590,17323831-173238... 103 1e-22
11_03_0139 + 10632020-10632211,10632876-10632937,10633141-106331... 98 7e-21
12_01_0791 + 7234021-7234221,7234801-7234862,7235441-7235481,723... 93 3e-19
01_01_0831 + 6493897-6494100,6494195-6494256,6498047-6498087,649... 91 6e-19
06_01_0411 + 2939148-2939354,2939517-2939578,2939712-2939752,294... 91 8e-19
06_01_0409 + 2926072-2926275,2926423-2926484,2926598-2926638,292... 89 4e-18
06_03_0423 - 20624149-20624375,20625581-20625621,20625709-206257... 88 8e-18
12_01_0332 - 2564541-2564758,2564847-2564887,2565138-2565199,256... 85 7e-17
11_01_0326 - 2435918-2436135,2436232-2436272,2436486-2436547,243... 85 7e-17
04_03_0855 - 20328695-20328912,20329128-20329168,20329782-203298... 85 7e-17
02_02_0177 + 7484526-7484723,7484913-7484974,7485606-7485646,748... 85 7e-17
01_01_0723 + 5651593-5651751,5651896-5651957,5652130-5652170,565... 81 7e-16
02_04_0085 - 19587026-19587243,19587509-19587549,19587811-195878... 81 1e-15
05_06_0093 - 25468271-25468320,25468393-25468433,25468592-254686... 56 3e-08
01_06_0704 + 31336622-31336825,31336948-31337009,31337040-313371... 44 1e-04
09_04_0714 - 19685374-19685430,19685606-19685669,19686117-196862... 39 0.004
05_05_0167 - 22868506-22868580,22868693-22869103 33 0.18
03_01_0015 + 126611-126639,126718-127099 33 0.31
02_01_0689 + 5137506-5137591,5138641-5138709,5139489-5139580,513... 31 0.71
11_06_0690 + 26303733-26306540 31 0.94
06_01_0609 + 4404287-4405023,4405496-4405631,4405724-4405876,440... 30 1.6
04_04_0321 - 24368041-24368091,24368520-24368711 30 2.2
02_02_0590 - 11894721-11895188,11895684-11895851 30 2.2
01_06_0430 + 29299970-29300031,29300162-29300294,29301057-293011... 29 2.9
06_01_0684 + 5008881-5009504 29 3.8
01_06_1704 + 39305989-39306186,39306282-39306789,39307094-393071... 29 3.8
01_01_0468 + 3454254-3454574,3454688-3454828,3454907-3455059 29 3.8
10_06_0114 - 10911713-10911724,10913642-10913772,10913869-109142... 28 8.7
>06_03_0155 -
17321982-17322214,17323550-17323590,17323831-17323892,
17324051-17324245
Length = 176
Score = 103 bits (248), Expect = 1e-22
Identities = 56/162 (34%), Positives = 89/162 (54%), Gaps = 2/162 (1%)
Frame = +2
Query: 185 QVVPDVIPK-APAALLQVKYPSGVEVKEGNELTPTQVKDEPSVKWDAEPGQYYTLAMTDP 361
+V+ DV+ P + V++ + ++ G E+ P+ P+V+ + + L MTDP
Sbjct: 12 RVIGDVVDLFVPTTAMSVRFGTK-DLTNGCEIKPSVAAAPPAVQIAGRVNELFALVMTDP 70
Query: 362 DAPSRKEPTFREWHHWLVGNIQ-GNEVNSGETLSQYVGSGPPEKTGLHRYVFLLYKQPSK 538
DAPS EPT REW HWLV NI G + + G+ + Y+G PP G+HRYV +L++Q ++
Sbjct: 71 DAPSPSEPTMREWLHWLVVNIPGGTDPSQGDVVVPYMGPRPP--VGIHRYVMVLFQQKAR 128
Query: 539 LTFDEPRLTNTSSDKRANFKIAEFAKKYNLGDPIAGNFYEAQ 664
+ P RA F FA +++LG P+A ++ AQ
Sbjct: 129 VAAPPP----DEDAARARFSTRAFADRHDLGLPVAALYFNAQ 166
>11_03_0139 +
10632020-10632211,10632876-10632937,10633141-10633181,
10633667-10633883,10634229-10634271
Length = 184
Score = 97.9 bits (233), Expect = 7e-21
Identities = 60/165 (36%), Positives = 89/165 (53%), Gaps = 3/165 (1%)
Frame = +2
Query: 188 VVPDVI-PKAPAALLQVKYPSGVEVKEGNELTPTQVKDEPSVKWDAEPGQ-YYTLAMTDP 361
VV D++ P A L+V Y S E+ G+EL P+QV ++P + + + YTL M DP
Sbjct: 11 VVGDIVDPFVTTASLRVFYNSK-EMTNGSELKPSQVLNQPRIYIEGRDMRTLYTLVMVDP 69
Query: 362 DAPSRKEPTFREWHHWLVGNI-QGNEVNSGETLSQYVGSGPPEKTGLHRYVFLLYKQPSK 538
DAPS PT RE+ HW+V +I + + G + Y P G+HR+VF+L++Q
Sbjct: 70 DAPSPSNPTKREYLHWMVTDIPETTDARFGNEIVPY--ESPRPTAGIHRFVFILFRQ--- 124
Query: 539 LTFDEPRLTNTSSDKRANFKIAEFAKKYNLGDPIAGNFYEAQYDD 673
R T + R NF +FA+ YNLG P+A F+ Q ++
Sbjct: 125 ----SVRQTTYAPGWRQNFNTRDFAELYNLGSPVAALFFNCQREN 165
>12_01_0791 +
7234021-7234221,7234801-7234862,7235441-7235481,
7235711-7235940
Length = 177
Score = 92.7 bits (220), Expect = 3e-19
Identities = 57/174 (32%), Positives = 89/174 (51%), Gaps = 3/174 (1%)
Frame = +2
Query: 152 MSTVAKSFEASQVVPDVIPKAPAALLQVKYPSGVEVKEGNELTPTQVKDEPSVK-WDAEP 328
MS +V DV+ A+ L + + E+ G+EL P+QV EP+V+
Sbjct: 1 MSMSRDPLVVGSIVGDVVDHFGASALLRLFYNHREMTSGSELRPSQVAGEPAVQITGGRD 60
Query: 329 GQ-YYTLAMTDPDAPSRKEPTFREWHHWLVGNI-QGNEVNSGETLSQYVGSGPPEKTGLH 502
G+ YTL M DPDAPS P+ RE+ HWLV ++ +G + + G + Y P G+H
Sbjct: 61 GRALYTLVMVDPDAPSPSNPSKREYLHWLVTDVPEGGDTSKGTEVVAY--ESPRPTAGIH 118
Query: 503 RYVFLLYKQPSKLTFDEPRLTNTSSDKRANFKIAEFAKKYNLGDPIAGNFYEAQ 664
R VF++++Q + + P R+NF +FA Y+LG P+A ++ Q
Sbjct: 119 RLVFIVFRQTVRQSIYAP-------GWRSNFNTRDFAACYSLGSPVAAAYFNCQ 165
>01_01_0831 +
6493897-6494100,6494195-6494256,6498047-6498087,
6498218-6498441
Length = 176
Score = 91.5 bits (217), Expect = 6e-19
Identities = 62/163 (38%), Positives = 84/163 (51%), Gaps = 3/163 (1%)
Frame = +2
Query: 185 QVVPDVI-PKAPAALLQVKYPSGVEVKEGNELTPTQVKDEPSVKWDA-EPGQYYTLAMTD 358
+VV DV+ P L+V Y + EV G EL P+ V D+P V + +YTL M D
Sbjct: 14 RVVGDVVDPFVRRVALRVAYGAR-EVANGCELRPSAVADQPRVAVGGPDMRTFYTLVMVD 72
Query: 359 PDAPSRKEPTFREWHHWLVGNIQGNE-VNSGETLSQYVGSGPPEKTGLHRYVFLLYKQPS 535
PDAPS +P RE+ HWLV +I V+ G + Y P G+HR VFLL++Q
Sbjct: 73 PDAPSPSDPNLREYLHWLVTDIPATTGVSFGTEVVCY--ESPRPVLGIHRLVFLLFEQLG 130
Query: 536 KLTFDEPRLTNTSSDKRANFKIAEFAKKYNLGDPIAGNFYEAQ 664
+ T P R NF +FA+ YNLG P+A ++ Q
Sbjct: 131 RQTVYAP-------GWRQNFSTRDFAELYNLGLPVAAVYFNCQ 166
>06_01_0411 +
2939148-2939354,2939517-2939578,2939712-2939752,
2941060-2941289
Length = 179
Score = 91.1 bits (216), Expect = 8e-19
Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 3/163 (1%)
Frame = +2
Query: 185 QVVPDVIPK-APAALLQVKYPSGVEVKEGNELTPTQVKDEPSVKWDAEPGQ-YYTLAMTD 358
+VV DV+ + L+V Y S V G EL P+ V +P V+ + +YTL M D
Sbjct: 15 RVVGDVLDAFVRSTNLKVTYGSKT-VSNGCELKPSMVTHQPRVEVGGNDMRTFYTLVMVD 73
Query: 359 PDAPSRKEPTFREWHHWLVGNIQGNEVNS-GETLSQYVGSGPPEKTGLHRYVFLLYKQPS 535
PDAPS +P RE+ HWLV +I G S G+ + Y P G+HR VF+L++Q
Sbjct: 74 PDAPSPSDPNLREYLHWLVTDIPGTTAASFGQEVMCY--ESPRPTMGIHRLVFVLFQQLG 131
Query: 536 KLTFDEPRLTNTSSDKRANFKIAEFAKKYNLGDPIAGNFYEAQ 664
+ T P R NF +FA+ YNLG P+A ++ Q
Sbjct: 132 RQTVYAP-------GWRQNFNTKDFAELYNLGSPVAAVYFNCQ 167
>06_01_0409 +
2926072-2926275,2926423-2926484,2926598-2926638,
2927165-2927394
Length = 178
Score = 88.6 bits (210), Expect = 4e-18
Identities = 60/164 (36%), Positives = 81/164 (49%), Gaps = 4/164 (2%)
Frame = +2
Query: 185 QVVPDVI-PKAPAALLQVKYPSGVEVKEGNELTPTQVKDEPSVKWDAEPGQ-YYTLAMTD 358
++V DV+ P L V Y + + V G EL P+ V +P V + +YTL M D
Sbjct: 14 RIVGDVLDPFVRITNLSVSYGARI-VSNGCELKPSMVTQQPRVVVGGNDMRTFYTLVMVD 72
Query: 359 PDAPSRKEPTFREWHHWLVGNIQGNEVNSGETLSQYV--GSGPPEKTGLHRYVFLLYKQP 532
PDAPS P RE+ HWLV +I G +G T Q V P G+HR VF+L++Q
Sbjct: 73 PDAPSPSNPNLREYLHWLVTDIPG---TTGATFGQEVMCYESPRPTMGIHRLVFVLFQQL 129
Query: 533 SKLTFDEPRLTNTSSDKRANFKIAEFAKKYNLGDPIAGNFYEAQ 664
+ T P R NF FA+ YNLG P+A ++ Q
Sbjct: 130 GRQTVYAP-------GWRQNFSTRNFAELYNLGSPVATVYFNCQ 166
>06_03_0423 -
20624149-20624375,20625581-20625621,20625709-20625770,
20626147-20626338
Length = 173
Score = 87.8 bits (208), Expect = 8e-18
Identities = 56/168 (33%), Positives = 87/168 (51%), Gaps = 3/168 (1%)
Frame = +2
Query: 170 SFEASQVVPDVIPKAPAAL-LQVKYPSGVEVKEGNELTPTQVKDEPSVKWDAEPGQY-YT 343
S S +V DV+ + ++ L V Y G V G E + V +P V+ + ++ YT
Sbjct: 5 SLTRSHIVGDVLDQFSNSVPLTVMY-DGRPVFNGKEFRSSAVSMKPRVEIGGDDFRFAYT 63
Query: 344 LAMTDPDAPSRKEPTFREWHHWLVGNIQGNEVNS-GETLSQYVGSGPPEKTGLHRYVFLL 520
L M DPDAP+ PT RE+ HW+V +I + +S G + Y P G+HR V +L
Sbjct: 64 LVMVDPDAPNPSNPTLREYLHWMVTDIPSSTDDSFGREIVTY--ESPSPTMGIHRIVMVL 121
Query: 521 YKQPSKLTFDEPRLTNTSSDKRANFKIAEFAKKYNLGDPIAGNFYEAQ 664
Y+Q + T P++ R NF + FA+++NLG P+A ++ Q
Sbjct: 122 YQQLGRGTVFAPQV-------RQNFNLRSFARRFNLGKPVAAMYFNCQ 162
>12_01_0332 -
2564541-2564758,2564847-2564887,2565138-2565199,
2565305-2565505
Length = 173
Score = 84.6 bits (200), Expect = 7e-17
Identities = 54/174 (31%), Positives = 84/174 (48%), Gaps = 3/174 (1%)
Frame = +2
Query: 152 MSTVAKSFEASQVVPDVIPKA-PAALLQVKYPSGVEVKEGNELTPTQVKDEPSVKWDA-E 325
MS + +V+ +VI P + V Y S V G+E P+ V +P V+ +
Sbjct: 1 MSRSVEPLVVGRVIGEVIDSFNPCTKMIVTYNSNKLVFNGHEFYPSAVVSKPRVEVQGGD 60
Query: 326 PGQYYTLAMTDPDAPSRKEPTFREWHHWLVGNIQG-NEVNSGETLSQYVGSGPPEKTGLH 502
++TL MTDPD P +P RE HW+V +I G + + G + Y P G+H
Sbjct: 61 MRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGREIISY--ESPKPSIGIH 118
Query: 503 RYVFLLYKQPSKLTFDEPRLTNTSSDKRANFKIAEFAKKYNLGDPIAGNFYEAQ 664
R+VF+L+KQ + P R +F +FA++ LG P+A ++ AQ
Sbjct: 119 RFVFVLFKQKRRQAVVVP-------SSRDHFNTRQFAEENELGLPVAAVYFNAQ 165
>11_01_0326 -
2435918-2436135,2436232-2436272,2436486-2436547,
2436620-2436820
Length = 173
Score = 84.6 bits (200), Expect = 7e-17
Identities = 54/174 (31%), Positives = 86/174 (49%), Gaps = 3/174 (1%)
Frame = +2
Query: 152 MSTVAKSFEASQVVPDVIPKA-PAALLQVKYPSGVEVKEGNELTPTQVKDEPSVKWDA-E 325
MS + +V+ +V+ P + V Y S V G+EL P+ V +P V+ +
Sbjct: 1 MSRSVEPLVVGRVIGEVLDTFNPCMKMIVTYNSNKLVFNGHELYPSAVVSKPRVEVQGGD 60
Query: 326 PGQYYTLAMTDPDAPSRKEPTFREWHHWLVGNIQG-NEVNSGETLSQYVGSGPPEKTGLH 502
++TL MTDPD P +P RE HW+V +I G + + G + Y P G+H
Sbjct: 61 LRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGREVISY--ESPKPNIGIH 118
Query: 503 RYVFLLYKQPSKLTFDEPRLTNTSSDKRANFKIAEFAKKYNLGDPIAGNFYEAQ 664
R++F+L+KQ + T P R +F FA++ +LG P+A ++ AQ
Sbjct: 119 RFIFVLFKQKRRQTVIVPSF-------RDHFNTRRFAEENDLGLPVAAVYFNAQ 165
>04_03_0855 -
20328695-20328912,20329128-20329168,20329782-20329843,
20330023-20330223
Length = 173
Score = 84.6 bits (200), Expect = 7e-17
Identities = 55/174 (31%), Positives = 83/174 (47%), Gaps = 3/174 (1%)
Frame = +2
Query: 152 MSTVAKSFEASQVVPDVIPKA-PAALLQVKYPSGVEVKEGNELTPTQVKDEPSVKWDA-E 325
MS V + +V+ +VI P + Y S +V G+EL P+ V +P V+ +
Sbjct: 1 MSRVLEPLVVGKVIGEVIDNFNPTVKMTATYSSNKQVFNGHELFPSAVVSKPRVEVQGGD 60
Query: 326 PGQYYTLAMTDPDAPSRKEPTFREWHHWLVGNIQG-NEVNSGETLSQYVGSGPPEKTGLH 502
++TL MTDPD P +P RE HW+V +I G + + G + Y P G+H
Sbjct: 61 LRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGREVVSY--ESPKPNIGIH 118
Query: 503 RYVFLLYKQPSKLTFDEPRLTNTSSDKRANFKIAEFAKKYNLGDPIAGNFYEAQ 664
R+V +L+KQ + R T R F FA +LG P+A ++ AQ
Sbjct: 119 RFVLVLFKQ-------KRRQAVTPPSSRDYFSTRRFAADNDLGLPVAAVYFNAQ 165
>02_02_0177 +
7484526-7484723,7484913-7484974,7485606-7485646,
7485845-7486101
Length = 185
Score = 84.6 bits (200), Expect = 7e-17
Identities = 57/169 (33%), Positives = 84/169 (49%), Gaps = 4/169 (2%)
Frame = +2
Query: 170 SFEASQVVPDVI-PKAPAALLQVKY-PSGVEVKEGNELTPTQVKDEPSVKWDAEPGQY-Y 340
S +V+ DV+ P L V Y G+ V G EL V ++P V+ + + Y
Sbjct: 5 SLATGRVIGDVLDPFISTVDLTVMYGDDGMPVISGVELRAPAVAEKPVVEVGGDDLRVAY 64
Query: 341 TLAMTDPDAPSRKEPTFREWHHWLVGNIQGN-EVNSGETLSQYVGSGPPEKTGLHRYVFL 517
TL M DPDAP+ PT RE+ HW+V +I + + G + Y P TG+HR V +
Sbjct: 65 TLVMVDPDAPNPSNPTLREYLHWMVTDIPASTDATYGREVVCY--ESPNPTTGIHRMVLV 122
Query: 518 LYKQPSKLTFDEPRLTNTSSDKRANFKIAEFAKKYNLGDPIAGNFYEAQ 664
L++Q + T P + R NF FA++YNLG P+A ++ Q
Sbjct: 123 LFRQLGRETVYAPAV-------RHNFTTRAFARRYNLGAPVAAVYFNCQ 164
>01_01_0723 +
5651593-5651751,5651896-5651957,5652130-5652170,
5654105-5654352
Length = 169
Score = 81.4 bits (192), Expect = 7e-16
Identities = 57/166 (34%), Positives = 81/166 (48%), Gaps = 2/166 (1%)
Frame = +2
Query: 164 AKSFEASQVVPDVIPK-APAALLQVKYPSGVEVKEGNELTPTQVKDEPSVKWDAEPGQYY 340
A S +V+ DV+ +P L+V Y +GV V G +L P+ V PSV+
Sbjct: 4 ANSLVLGRVIGDVVDLFSPEVTLRVMY-NGVRVVNGEDLRPSAVSARPSVE--------- 53
Query: 341 TLAMTDPDAPSRKEPTFREWHHWLVGNIQG-NEVNSGETLSQYVGSGPPEKTGLHRYVFL 517
M DPDAP+ PT RE+ HWLV +I G + N G + Y P G+HR +
Sbjct: 54 --VMVDPDAPNPSNPTLREYLHWLVTDIPGTTDANYGREVVCY--ESPRPAAGIHRVAVV 109
Query: 518 LYKQPSKLTFDEPRLTNTSSDKRANFKIAEFAKKYNLGDPIAGNFY 655
L++Q ++ D+P L R NF FA + LG P+A F+
Sbjct: 110 LFRQMARGGVDQPPLL------RHNFSTRGFADDHALGAPVAAAFF 149
>02_04_0085 -
19587026-19587243,19587509-19587549,19587811-19587872,
19587990-19588190
Length = 173
Score = 80.6 bits (190), Expect = 1e-15
Identities = 49/174 (28%), Positives = 83/174 (47%), Gaps = 3/174 (1%)
Frame = +2
Query: 152 MSTVAKSFEASQVVPDVIPKA-PAALLQVKYPSGVEVKEGNELTPTQVKDEPSVKWDA-E 325
MS V + +V+ +V+ P + Y + +V G+E P+ V +P V+ +
Sbjct: 1 MSRVLEPLIVGKVIGEVLDNFNPTVKMTATYGANKQVFNGHEFFPSAVAGKPRVEVQGGD 60
Query: 326 PGQYYTLAMTDPDAPSRKEPTFREWHHWLVGNIQG-NEVNSGETLSQYVGSGPPEKTGLH 502
++TL MTDPD P +P RE HW+V +I G + + G + Y P G+H
Sbjct: 61 LRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGREVVSY--ESPRPNIGIH 118
Query: 503 RYVFLLYKQPSKLTFDEPRLTNTSSDKRANFKIAEFAKKYNLGDPIAGNFYEAQ 664
R++ +L++Q + P R F +FA+ +LG P+A ++ AQ
Sbjct: 119 RFILVLFRQKRRQAVSPP-------PSRDRFSTRQFAEDNDLGLPVAAVYFNAQ 165
>05_06_0093 -
25468271-25468320,25468393-25468433,25468592-25468653,
25468872-25469057
Length = 112
Score = 56.0 bits (129), Expect = 3e-08
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Frame = +2
Query: 182 SQVVPDVI-PKAPAALLQVKYPSGVEVKEGNELTPTQVKDEPSVKWDAEPGQY-YTLAMT 355
SQ++PDV+ P L+V Y S + + G L P+ V +P V + YTL +
Sbjct: 7 SQIIPDVLDPFISTISLRVTYNSRL-LLAGAALKPSAVVSKPQVDVGGNDMRVSYTLVLV 65
Query: 356 DPDAPSRKEPTFREWHHWLVGNI 424
DPDAPS +P+ RE+ HW+V +I
Sbjct: 66 DPDAPSPSDPSLREYLHWMVTDI 88
>01_06_0704 +
31336622-31336825,31336948-31337009,31337040-31337171,
31337304-31337341,31337825-31337872,31338545-31338780
Length = 239
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Frame = +2
Query: 182 SQVVPDVI-PKAPAALLQVKYPSGVEVKEGNELTPTQVKDEPSVK-WDAEPGQYYTLAMT 355
+ V+ DV+ P P L++ Y + + G EL P+ +P V + +YTL +
Sbjct: 13 AHVIHDVLDPFRPTMPLRITYNDRL-LLAGAELKPSATVHKPRVDIGGTDLRVFYTLVLV 71
Query: 356 DPDAPSRKEPTFREWHHWLVG 418
DPDAPS P+ E+ H+L G
Sbjct: 72 DPDAPSPSNPSLGEYLHYLSG 92
>09_04_0714 -
19685374-19685430,19685606-19685669,19686117-19686256,
19687916-19687969,19688407-19688451,19689480-19689517,
19689713-19689831,19689955-19690016,19691038-19691157
Length = 232
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 254 EVKEGNELTPTQVKDEPSVKWDA-EPGQYYTLAMTDPDAPSRKEPTFREWHH 406
E+ G + + V P V+ + + + YTL M DPDAPS +P +RE+ H
Sbjct: 9 EITNGTGVRSSAVFTAPHVEIEGRDQTKLYTLVMVDPDAPSPSKPEYREYLH 60
Score = 32.7 bits (71), Expect = 0.31
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 551 EPRLTNTSSDKRANFKIAEFAKKYNLGDPIAGNFYEAQYDDYV 679
E R T + R NF + +F+ YNLG P+A ++ Q + V
Sbjct: 147 EARQTVYAPGWRQNFNVRDFSAFYNLGPPVAALYFNCQKESGV 189
>05_05_0167 - 22868506-22868580,22868693-22869103
Length = 161
Score = 33.5 bits (73), Expect = 0.18
Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Frame = +2
Query: 302 PSVKWDAEPGQYYTLAMT--DPDAPSRKEPTFREWHHWLVGNIQGNEVNSGETLSQYVGS 475
P V+W P +LA+ D DAP P W HW+V NI + E S G+
Sbjct: 37 PPVEWYGVPDGTRSLALVVHDVDAPDPDGPIV-PWTHWVVANIPPSVKGLPEGFSGKEGA 95
Query: 476 GPPEKTGLHRYVFLLYKQP 532
E G+ V +KQP
Sbjct: 96 AAREYGGIQEGV-NDWKQP 113
>03_01_0015 + 126611-126639,126718-127099
Length = 136
Score = 32.7 bits (71), Expect = 0.31
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = -1
Query: 520 QEEHVSVQACLFRRSRAHVLGQSFAGVYLVALDVANQPVVPFAKCGFFTGRRIRVGHGQS 341
Q++ VS C++R AH G+ V DVA+ P +P K T R GHG++
Sbjct: 55 QQQEVSESKCVYRNEVAHAAGERTQ----VLQDVASDPTLPRTK----TVRCAACGHGEA 106
Query: 340 V 338
V
Sbjct: 107 V 107
>02_01_0689 + 5137506-5137591,5138641-5138709,5139489-5139580,
5139967-5140289,5141373-5142479,5142593-5143279,
5144214-5144522,5145488-5145823,5146165-5146263,
5146676-5146940,5146950-5147104,5147666-5149723,
5150168-5150367,5150662-5150718,5150965-5151079
Length = 1985
Score = 31.5 bits (68), Expect = 0.71
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 459 PSTWALDLRKRQACTDTCSSCTNNHRSSHSTSRDSLTLRAT--NVPISKLPSSPRSTT*G 632
PS A+D A + SC + S++ D+L L+ T + P +LP ST+
Sbjct: 1320 PSGMAIDQIDGDAIDEGSQSCEKRSLGAKSSTCDNLNLKDTEFSTPGRELPDERASTSFQ 1379
Query: 633 IRLRATSTK 659
L A+STK
Sbjct: 1380 DNLEASSTK 1388
>11_06_0690 + 26303733-26306540
Length = 935
Score = 31.1 bits (67), Expect = 0.94
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +2
Query: 176 EASQVVPDVIPKAPAALLQVKYPSGVEVKEGNELTPTQVKDEPSVKWDAEP 328
EA+ VV +P APA +++ GV EG E + K + S A+P
Sbjct: 139 EAAAVVAAAVPPAPAPTREIRAREGVGQAEGKEKEKEKGKGKVSAPSSAQP 189
>06_01_0609 +
4404287-4405023,4405496-4405631,4405724-4405876,
4405985-4406128,4406224-4406375,4406453-4406552,
4406653-4406775,4406876-4407037,4407190-4407247,
4407324-4407502,4408294-4408402,4408567-4408637,
4408891-4408986,4409727-4409803,4410983-4411066,
4411473-4411607,4411744-4411819,4413072-4413167,
4413580-4413671,4413745-4413868,4413966-4414052
Length = 996
Score = 30.3 bits (65), Expect = 1.6
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Frame = +2
Query: 182 SQVVPDVIPKAP--AALLQVKYPSGVEVKEGNELTPTQVKDEPSVKWDAEPGQYYTLAMT 355
S+ P PKAP AA + PS V TPT+V E VK P +
Sbjct: 36 SKPTPRRKPKAPPVAAPMSPVTPSSVRRSSRLLETPTKVTSETPVKPTPTPKRKRAAPSP 95
Query: 356 DPDAPSRKEP 385
P P++ EP
Sbjct: 96 SPKTPTQSEP 105
>04_04_0321 - 24368041-24368091,24368520-24368711
Length = 80
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +2
Query: 188 VVPDVI-PKAPAALLQVKYPSGVEVKEGNELTPTQVKDEPSVK 313
VV D++ P +A L+V Y + E+ G+EL P+QV +EP ++
Sbjct: 11 VVGDILDPFNKSASLKVLY-NNKELTNGSELKPSQVANEPRIE 52
>02_02_0590 - 11894721-11895188,11895684-11895851
Length = 211
Score = 29.9 bits (64), Expect = 2.2
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +2
Query: 233 VKYPSGVEVKEGNELTPTQVKDEP 304
++ P ++V+ GN+LTPT V ++P
Sbjct: 71 IQSPINLQVEHGNDLTPTSVSEKP 94
>01_06_0430 +
29299970-29300031,29300162-29300294,29301057-29301160,
29302201-29302372,29302488-29302628,29302707-29303055,
29303133-29305477
Length = 1101
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/60 (23%), Positives = 28/60 (46%)
Frame = +2
Query: 416 GNIQGNEVNSGETLSQYVGSGPPEKTGLHRYVFLLYKQPSKLTFDEPRLTNTSSDKRANF 595
G + + V S + +G PP +H + + P + +P+ ++ SS+K +NF
Sbjct: 440 GRTETSRVGSQNMPTNSLGQSPPYSPHIHSDEYDMPTDPHRSHSPDPQYSDDSSEKESNF 499
>06_01_0684 + 5008881-5009504
Length = 207
Score = 29.1 bits (62), Expect = 3.8
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 527 VCTRGTRICAGLSFPEVQSPRTGTK 453
+C RG + AGL+FPE P T +
Sbjct: 74 ICLRGVQAIAGLNFPESPPPPTAAR 98
>01_06_1704 +
39305989-39306186,39306282-39306789,39307094-39307137,
39307243-39307398,39307431-39307549,39308176-39308950
Length = 599
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -1
Query: 451 FAGVYLVALDVANQPVV-PFAKCGFFTGRRIRVGHGQSVVLSW 326
+AG+YLVAL +P++ PF F G + G QS +W
Sbjct: 86 YAGMYLVALGGVLEPIMAPFGADQFDDGEDDQRGRRQSSFFNW 128
>01_01_0468 + 3454254-3454574,3454688-3454828,3454907-3455059
Length = 204
Score = 29.1 bits (62), Expect = 3.8
Identities = 19/65 (29%), Positives = 25/65 (38%)
Frame = -3
Query: 518 RGTRICAGLSFPEVQSPRTGTKFRRSLPRCPGCCQPASGAIREMWVLYGTAHQGRSWPEC 339
+ R C F + R + +RR P P AS R + AH GR WP
Sbjct: 69 KNPRACRIFRFLRSKLARFPSIWRRKKPPPPARATAASQLWRNRATMAWPAHGGRRWPAR 128
Query: 338 STVLA 324
+T A
Sbjct: 129 TTATA 133
>10_06_0114 -
10911713-10911724,10913642-10913772,10913869-10914229,
10914339-10915081,10918916-10918964,10919063-10919334,
10919426-10919519,10919618-10920000,10920504-10920575,
10920656-10920778,10920875-10921048,10921115-10921579,
10921662-10921839
Length = 1018
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +2
Query: 332 QYYTLAMTDPDAPSRKEPTFREWHHWLVG-NIQGNEVNSGETLSQYVGSGPPEKTGL 499
+Y+ + DP+A F E + W+ G N+Q ++ + + + EK GL
Sbjct: 821 EYFKMNQVDPEARKLLYKEFPEHYRWITGQNVQPEDLRTVSGTTYFTFREACEKRGL 877
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,373,549
Number of Sequences: 37544
Number of extensions: 503623
Number of successful extensions: 1458
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1434
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1909952136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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