Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1b03
(409 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z46795-6|CAE48511.2| 838|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z46792-8|CAE48495.2| 838|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical pr... 29 1.7
U41534-13|AAD31050.2| 422|Caenorhabditis elegans Hypothetical p... 28 2.3
U41534-12|AAM22027.1| 357|Caenorhabditis elegans Hypothetical p... 28 2.3
AL021497-10|CAD56614.1| 490|Caenorhabditis elegans Hypothetical... 27 5.2
AL021497-9|CAA16397.1| 487|Caenorhabditis elegans Hypothetical ... 27 5.2
U13071-4|AAA20671.1| 510|Caenorhabditis elegans Hypothetical pr... 26 9.1
U00048-9|AAB53824.1| 208|Caenorhabditis elegans Hypothetical pr... 26 9.1
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 26 9.1
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 26 9.1
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 26 9.1
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 26 9.1
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 26 9.1
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 26 9.1
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 26 9.1
>Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical
protein C52A11.4f protein.
Length = 2371
Score = 28.7 bits (61), Expect = 1.7
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 32 VVNKMMNSVEFSD-VNFIPASGGSTVPASETISIAADDS 145
V N+ + D V I ASGGS+VP++ + ++++DD+
Sbjct: 124 VKNRSTGKLRIGDCVVAIDASGGSSVPSAPSSTVSSDDT 162
>Z46795-6|CAE48511.2| 838|Caenorhabditis elegans Hypothetical
protein C52A11.4b protein.
Length = 838
Score = 28.7 bits (61), Expect = 1.7
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 32 VVNKMMNSVEFSD-VNFIPASGGSTVPASETISIAADDS 145
V N+ + D V I ASGGS+VP++ + ++++DD+
Sbjct: 124 VKNRSTGKLRIGDCVVAIDASGGSSVPSAPSSTVSSDDT 162
>Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical
protein C52A11.4a protein.
Length = 2393
Score = 28.7 bits (61), Expect = 1.7
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 32 VVNKMMNSVEFSD-VNFIPASGGSTVPASETISIAADDS 145
V N+ + D V I ASGGS+VP++ + ++++DD+
Sbjct: 124 VKNRSTGKLRIGDCVVAIDASGGSSVPSAPSSTVSSDDT 162
>Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical
protein C52A11.4d protein.
Length = 2491
Score = 28.7 bits (61), Expect = 1.7
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 32 VVNKMMNSVEFSD-VNFIPASGGSTVPASETISIAADDS 145
V N+ + D V I ASGGS+VP++ + ++++DD+
Sbjct: 222 VKNRSTGKLRIGDCVVAIDASGGSSVPSAPSSTVSSDDT 260
>Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical
protein C52A11.4f protein.
Length = 2371
Score = 28.7 bits (61), Expect = 1.7
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 32 VVNKMMNSVEFSD-VNFIPASGGSTVPASETISIAADDS 145
V N+ + D V I ASGGS+VP++ + ++++DD+
Sbjct: 124 VKNRSTGKLRIGDCVVAIDASGGSSVPSAPSSTVSSDDT 162
>Z46792-8|CAE48495.2| 838|Caenorhabditis elegans Hypothetical
protein C52A11.4b protein.
Length = 838
Score = 28.7 bits (61), Expect = 1.7
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 32 VVNKMMNSVEFSD-VNFIPASGGSTVPASETISIAADDS 145
V N+ + D V I ASGGS+VP++ + ++++DD+
Sbjct: 124 VKNRSTGKLRIGDCVVAIDASGGSSVPSAPSSTVSSDDT 162
>Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical
protein C52A11.4a protein.
Length = 2393
Score = 28.7 bits (61), Expect = 1.7
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 32 VVNKMMNSVEFSD-VNFIPASGGSTVPASETISIAADDS 145
V N+ + D V I ASGGS+VP++ + ++++DD+
Sbjct: 124 VKNRSTGKLRIGDCVVAIDASGGSSVPSAPSSTVSSDDT 162
>Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical
protein C52A11.4d protein.
Length = 2491
Score = 28.7 bits (61), Expect = 1.7
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 32 VVNKMMNSVEFSD-VNFIPASGGSTVPASETISIAADDS 145
V N+ + D V I ASGGS+VP++ + ++++DD+
Sbjct: 222 VKNRSTGKLRIGDCVVAIDASGGSSVPSAPSSTVSSDDT 260
>U41534-13|AAD31050.2| 422|Caenorhabditis elegans Hypothetical
protein C16A3.10a protein.
Length = 422
Score = 28.3 bits (60), Expect = 2.3
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -2
Query: 123 IVSEAGTVLPPEAGMKLTSENSTEFIILFTTGDSESG 13
I EAG VLP +K S+ ++ +LF T + +SG
Sbjct: 213 IQGEAGVVLPDPGYLKGVSDLCKKYNVLFITDEVQSG 249
>U41534-12|AAM22027.1| 357|Caenorhabditis elegans Hypothetical
protein C16A3.10b protein.
Length = 357
Score = 28.3 bits (60), Expect = 2.3
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -2
Query: 123 IVSEAGTVLPPEAGMKLTSENSTEFIILFTTGDSESG 13
I EAG VLP +K S+ ++ +LF T + +SG
Sbjct: 148 IQGEAGVVLPDPGYLKGVSDLCKKYNVLFITDEVQSG 184
>AL021497-10|CAD56614.1| 490|Caenorhabditis elegans Hypothetical
protein Y51A2D.13b protein.
Length = 490
Score = 27.1 bits (57), Expect = 5.2
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = -1
Query: 184 RFHFLNVELLMRRAIIRSDADRL*SR--HGAPTGSRYEINIGKLNRIH 47
R HF N++ +RRA++R R + H G+R+ ++ LN H
Sbjct: 318 RVHFSNIDDAIRRAVVRGVKIRFLAAALHYPDIGTRFLRSLESLNGFH 365
>AL021497-9|CAA16397.1| 487|Caenorhabditis elegans Hypothetical
protein Y51A2D.13a protein.
Length = 487
Score = 27.1 bits (57), Expect = 5.2
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = -1
Query: 184 RFHFLNVELLMRRAIIRSDADRL*SR--HGAPTGSRYEINIGKLNRIH 47
R HF N++ +RRA++R R + H G+R+ ++ LN H
Sbjct: 315 RVHFSNIDDAIRRAVVRGVKIRFLAAALHYPDIGTRFLRSLESLNGFH 362
>U13071-4|AAA20671.1| 510|Caenorhabditis elegans Hypothetical
protein T22F7.1 protein.
Length = 510
Score = 26.2 bits (55), Expect = 9.1
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +2
Query: 47 MNSVEFSDVNFIPASGGSTVPASETISIAADDSASHQ 157
M + E + + + GG T P ++S A DD HQ
Sbjct: 1 MKASEEEEEEVVHSGGGYTSPLMSSLSDAYDDGEEHQ 37
>U00048-9|AAB53824.1| 208|Caenorhabditis elegans Hypothetical
protein C05D11.3 protein.
Length = 208
Score = 26.2 bits (55), Expect = 9.1
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 214 GARFIHIHYVRFHFLNVELLMR 149
G RFIH++ + HFL L +R
Sbjct: 115 GTRFIHVNAEKVHFLTTRLNIR 136
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 26.2 bits (55), Expect = 9.1
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -3
Query: 302 SDACKVNSKNEYIDVSNCKWR 240
S+ C +SKN + D+ C+W+
Sbjct: 887 SNGCFSSSKNNFDDLETCQWK 907
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 26.2 bits (55), Expect = 9.1
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -3
Query: 302 SDACKVNSKNEYIDVSNCKWR 240
S+ C +SKN + D+ C+W+
Sbjct: 1101 SNGCFSSSKNNFDDLETCQWK 1121
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 26.2 bits (55), Expect = 9.1
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -3
Query: 302 SDACKVNSKNEYIDVSNCKWR 240
S+ C +SKN + D+ C+W+
Sbjct: 1237 SNGCFSSSKNNFDDLETCQWK 1257
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 26.2 bits (55), Expect = 9.1
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -3
Query: 302 SDACKVNSKNEYIDVSNCKWR 240
S+ C +SKN + D+ C+W+
Sbjct: 1286 SNGCFSSSKNNFDDLETCQWK 1306
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 26.2 bits (55), Expect = 9.1
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -3
Query: 302 SDACKVNSKNEYIDVSNCKWR 240
S+ C +SKN + D+ C+W+
Sbjct: 1278 SNGCFSSSKNNFDDLETCQWK 1298
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 26.2 bits (55), Expect = 9.1
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -3
Query: 302 SDACKVNSKNEYIDVSNCKWR 240
S+ C +SKN + D+ C+W+
Sbjct: 1289 SNGCFSSSKNNFDDLETCQWK 1309
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 26.2 bits (55), Expect = 9.1
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -3
Query: 302 SDACKVNSKNEYIDVSNCKWR 240
S+ C +SKN + D+ C+W+
Sbjct: 1290 SNGCFSSSKNNFDDLETCQWK 1310
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,745,835
Number of Sequences: 27780
Number of extensions: 129448
Number of successful extensions: 341
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 341
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 651753158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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