Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1a20
         (734 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0261 - 2007522-2007590,2007684-2007926,2008008-2008106,200...    31   0.72 
09_02_0607 - 11183382-11183387,11183481-11183637,11184220-111842...    31   0.95 
02_03_0032 + 14112354-14112417,14112471-14112549,14114435-141145...    30   2.2  
08_01_0606 - 5321751-5321819,5321950-5322192,5322279-5322377,532...    29   2.9  
12_02_0122 + 13923510-13925081                                         29   3.8  
01_01_0712 - 5509748-5509990,5510099-5510554,5510959-5511951           28   8.8  

>03_01_0261 -
           2007522-2007590,2007684-2007926,2008008-2008106,
           2008214-2008693,2008806-2008904,2009097-2009218,
           2009296-2009414,2009492-2009559,2009832-2010017,
           2010323-2010425,2010477-2010556,2010638-2010694,
           2010771-2010913,2010988-2011132,2011501-2011662,
           2011759-2011944,2012273-2012365,2012893-2013053,
           2013440-2013547,2013664-2013928
          Length = 995

 Score = 31.5 bits (68), Expect = 0.72
 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
 Frame = +3

Query: 531 VPSTIHCDHLIEAQVGGEKDLARAK-----DLNKEVYKFLETAGAKY-GVGFWKPGSGII 692
           VP  +  DH ++  V   ++  +A        NKE + FL+     +  +    PGSGI+
Sbjct: 210 VPVDLVIDHSVQVDVARSENAVQANMELEFHRNKERFGFLKWGSTAFRNMLVVPPGSGIV 269

Query: 693 HQIILENYA 719
           HQ+ LE  A
Sbjct: 270 HQVNLEYLA 278


>09_02_0607 -
           11183382-11183387,11183481-11183637,11184220-11184284,
           11184397-11184469,11184759-11184905,11185515-11185562,
           11185637-11185716,11186112-11186439,11186525-11186576,
           11187397-11187523,11187613-11187990
          Length = 486

 Score = 31.1 bits (67), Expect = 0.95
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -3

Query: 222 GFQRVPPLSCYPGHAKLSYSAPWSPD 145
           GF+R+P L C+P   +L+    WSP+
Sbjct: 202 GFKRIPSLECWPDVLQLTEPENWSPN 227


>02_03_0032 +
           14112354-14112417,14112471-14112549,14114435-14114551,
           14114721-14114802,14115734-14115868,14115948-14116123,
           14116219-14116370,14116433-14117622
          Length = 664

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
 Frame = +3

Query: 282 KFDKVPLPYEKLTKNLEVVKKRLGRELTLSEKILYSHLDDPKGQEI-ERGASYLRLRPDR 458
           +FD  P P E+      +   +  RE+   +  L++H    K +E+   G   +   PD 
Sbjct: 259 QFDVAPKPLEETKSYTAIAVLQQMREMVHMKAKLFAHPSPAKQKEVLFEGMLLISNSPDS 318

Query: 459 VAMQDATAQMAMLQFISSGLPRVAVPSTIHCDHLIEAQVGGEKDLARAKDLNK 617
           V  Q + +       +SS  P +  P+    DHL   QV   +D+   +D +K
Sbjct: 319 VLTQSSLS-------VSSSSPEIGDPN----DHL---QVDSSQDIVHIEDRSK 357


>08_01_0606 -
           5321751-5321819,5321950-5322192,5322279-5322377,
           5322463-5322942,5323069-5323167,5323306-5323427,
           5323517-5323635,5323734-5323801,5323889-5324074,
           5324169-5324244,5324339-5324418,5324505-5324561,
           5324980-5325122,5325208-5325352,5325652-5325813,
           5325893-5326078,5326263-5326355,5326437-5326597,
           5327005-5327109,5328263-5328278
          Length = 902

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 6/92 (6%)
 Frame = +3

Query: 453 DRVAMQDATAQMAMLQFISSGLPRVAVPSTIHCDHLIEAQVGGEKDLARAK-----DLNK 617
           D  AM+DA A++       +      VP  +  DH ++  V    +  ++        N 
Sbjct: 104 DLAAMRDAMAKLGS----DANKINPLVPVDLVIDHSVQVDVARSPNAVQSNMELEFKRNN 159

Query: 618 EVYKFLETAG-AKYGVGFWKPGSGIIHQIILE 710
           E + FL+    A + +    PGSGI+HQ+ LE
Sbjct: 160 ERFGFLKWGSTAFHNMLVVPPGSGIVHQVNLE 191


>12_02_0122 + 13923510-13925081
          Length = 523

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +2

Query: 605 GPQQRSIQVFRDCRS*IWSRFLEARLWYYPSDHSGELCV 721
           G   RS+QV  D    +   F  A LW+YPS  S +  V
Sbjct: 93  GRDARSVQVSVDDHQEVTDSFRGATLWWYPSSMSNKSSV 131


>01_01_0712 - 5509748-5509990,5510099-5510554,5510959-5511951
          Length = 563

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = -3

Query: 312 FRKARVPCRTWTSPPGPRRRSME 244
           FR+AR   R +TSPP P+RR  E
Sbjct: 160 FREARASSRRFTSPP-PKRRGSE 181


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,662,257
Number of Sequences: 37544
Number of extensions: 482932
Number of successful extensions: 1287
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1287
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)