Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1a09
         (727 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    25   0.47 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   1.9  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    23   3.3  

>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 9/14 (64%), Positives = 13/14 (92%)
 Frame = +1

Query: 481 KGELSDEQIKKIEN 522
           KG L+DEQ+K++EN
Sbjct: 236 KGRLTDEQLKELEN 249


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -3

Query: 449 FNSFNRVFIFVISLALGYLVPCLITIHIFESLQF 348
           FN+F ++ IFV+SL+    V  ++ I       F
Sbjct: 75  FNTFAKLLIFVVSLSGNSAVFIMLIISFMHKKSF 108


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 7/32 (21%)
 Frame = +3

Query: 138 ILLDYLINSC-------KNKLGKIINYNLLNY 212
           IL D L+ +C       K + GKI+ + LLNY
Sbjct: 76  ILPDALVTNCSKCSEVQKKQAGKILTFVLLNY 107


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,499
Number of Sequences: 336
Number of extensions: 3570
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)