Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1a06
(344 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB051076-1|BAB83046.1| 980|Homo sapiens peroxine Pex6p protein. 38 0.011
U56602-1|AAC50655.1| 980|Homo sapiens Pxaaa1p protein. 37 0.015
D83703-1|BAA12069.1| 980|Homo sapiens peroxisome assembly facto... 37 0.015
BC048331-1|AAH48331.1| 980|Homo sapiens peroxisomal biogenesis ... 37 0.015
AL158815-3|CAI19463.1| 980|Homo sapiens peroxisomal biogenesis ... 37 0.015
AF108098-1|AAF62564.1| 980|Homo sapiens peroxisome assembly fac... 37 0.015
AB051077-1|BAB83047.1| 892|Homo sapiens peroxin Pex6p protein. 37 0.015
>AB051076-1|BAB83046.1| 980|Homo sapiens peroxine Pex6p protein.
Length = 980
Score = 37.5 bits (83), Expect = 0.011
Identities = 22/90 (24%), Positives = 40/90 (44%)
Frame = +3
Query: 33 RYKLRPEVNLEAVAEALPDKCTGADLLQXXXXXXXXXXXXXXXKLHNGTLKESELSPDSI 212
++KL P V+L V + P + TGADL L G E ++
Sbjct: 889 KFKLEPSVSLVNVLDCCPPQLTGADLYSLCSDAMTAALKRRVHDLEEGL----EQGSSAL 944
Query: 213 VIGVSELWEGVVLFRPSVTDDELSHYEAME 302
++ + +L + +PSV++ EL Y+ ++
Sbjct: 945 MLTMEDLLQAAARLQPSVSEQELLRYKRIQ 974
>U56602-1|AAC50655.1| 980|Homo sapiens Pxaaa1p protein.
Length = 980
Score = 37.1 bits (82), Expect = 0.015
Identities = 22/90 (24%), Positives = 40/90 (44%)
Frame = +3
Query: 33 RYKLRPEVNLEAVAEALPDKCTGADLLQXXXXXXXXXXXXXXXKLHNGTLKESELSPDSI 212
++KL P V+L V + P + TGADL L G E ++
Sbjct: 889 KFKLEPSVSLVNVLDCCPPQLTGADLYSLCSDAMTAALKRRVHDLEEGL----EPGSSAL 944
Query: 213 VIGVSELWEGVVLFRPSVTDDELSHYEAME 302
++ + +L + +PSV++ EL Y+ ++
Sbjct: 945 MLTMEDLLQAAARLQPSVSEQELLRYKRIQ 974
>D83703-1|BAA12069.1| 980|Homo sapiens peroxisome assembly factor-2
protein.
Length = 980
Score = 37.1 bits (82), Expect = 0.015
Identities = 22/90 (24%), Positives = 40/90 (44%)
Frame = +3
Query: 33 RYKLRPEVNLEAVAEALPDKCTGADLLQXXXXXXXXXXXXXXXKLHNGTLKESELSPDSI 212
++KL P V+L V + P + TGADL L G E ++
Sbjct: 889 KFKLEPSVSLVNVLDCCPPQLTGADLYSLCSDAMTAALKRRVHDLEEGL----EPGSSAL 944
Query: 213 VIGVSELWEGVVLFRPSVTDDELSHYEAME 302
++ + +L + +PSV++ EL Y+ ++
Sbjct: 945 MLTMEDLLQAAARLQPSVSEQELLRYKRIQ 974
>BC048331-1|AAH48331.1| 980|Homo sapiens peroxisomal biogenesis
factor 6 protein.
Length = 980
Score = 37.1 bits (82), Expect = 0.015
Identities = 22/90 (24%), Positives = 40/90 (44%)
Frame = +3
Query: 33 RYKLRPEVNLEAVAEALPDKCTGADLLQXXXXXXXXXXXXXXXKLHNGTLKESELSPDSI 212
++KL P V+L V + P + TGADL L G E ++
Sbjct: 889 KFKLEPSVSLVNVLDCCPPQLTGADLYSLCSDAMTAALKRRVHDLEEGL----EPGSSAL 944
Query: 213 VIGVSELWEGVVLFRPSVTDDELSHYEAME 302
++ + +L + +PSV++ EL Y+ ++
Sbjct: 945 MLTMEDLLQAAARLQPSVSEQELLRYKRIQ 974
>AL158815-3|CAI19463.1| 980|Homo sapiens peroxisomal biogenesis
factor 6 protein.
Length = 980
Score = 37.1 bits (82), Expect = 0.015
Identities = 22/90 (24%), Positives = 40/90 (44%)
Frame = +3
Query: 33 RYKLRPEVNLEAVAEALPDKCTGADLLQXXXXXXXXXXXXXXXKLHNGTLKESELSPDSI 212
++KL P V+L V + P + TGADL L G E ++
Sbjct: 889 KFKLEPSVSLVNVLDCCPPQLTGADLYSLCSDAMTAALKRRVHDLEEGL----EPGSSAL 944
Query: 213 VIGVSELWEGVVLFRPSVTDDELSHYEAME 302
++ + +L + +PSV++ EL Y+ ++
Sbjct: 945 MLTMEDLLQAAARLQPSVSEQELLRYKRIQ 974
>AF108098-1|AAF62564.1| 980|Homo sapiens peroxisome assembly factor-2
protein.
Length = 980
Score = 37.1 bits (82), Expect = 0.015
Identities = 22/90 (24%), Positives = 40/90 (44%)
Frame = +3
Query: 33 RYKLRPEVNLEAVAEALPDKCTGADLLQXXXXXXXXXXXXXXXKLHNGTLKESELSPDSI 212
++KL P V+L V + P + TGADL L G E ++
Sbjct: 889 KFKLEPSVSLVNVLDCCPPQLTGADLYSLCSDAMTAALKRRVHDLEEGL----EPGSSAL 944
Query: 213 VIGVSELWEGVVLFRPSVTDDELSHYEAME 302
++ + +L + +PSV++ EL Y+ ++
Sbjct: 945 MLTMEDLLQAAARLQPSVSEQELLRYKRIQ 974
>AB051077-1|BAB83047.1| 892|Homo sapiens peroxin Pex6p protein.
Length = 892
Score = 37.1 bits (82), Expect = 0.015
Identities = 22/90 (24%), Positives = 40/90 (44%)
Frame = +3
Query: 33 RYKLRPEVNLEAVAEALPDKCTGADLLQXXXXXXXXXXXXXXXKLHNGTLKESELSPDSI 212
++KL P V+L V + P + TGADL L G E ++
Sbjct: 801 KFKLEPSVSLVNVLDCCPPQLTGADLYSLCSDAMTAALKRRVHDLEEGL----EPGSSAL 856
Query: 213 VIGVSELWEGVVLFRPSVTDDELSHYEAME 302
++ + +L + +PSV++ EL Y+ ++
Sbjct: 857 MLTMEDLLQAAARLQPSVSEQELLRYKRIQ 886
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,457,392
Number of Sequences: 237096
Number of extensions: 789763
Number of successful extensions: 1180
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1180
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1968306988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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