Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1a06
         (344 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69384-2|CAD89746.1|  521|Caenorhabditis elegans Hypothetical pr...    28   1.6  
Z69384-1|CAA93416.1|  520|Caenorhabditis elegans Hypothetical pr...    28   1.6  
U39849-3|AAN63461.1|   83|Caenorhabditis elegans Hypothetical pr...    27   3.6  
U39849-2|AAN63462.2|  370|Caenorhabditis elegans Hypothetical pr...    27   3.6  

>Z69384-2|CAD89746.1|  521|Caenorhabditis elegans Hypothetical
           protein T11G6.1b protein.
          Length = 521

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 16/31 (51%), Positives = 18/31 (58%)
 Frame = +3

Query: 186 ESELSPDSIVIGVSELWEGVVLFRPSVTDDE 278
           E    P +IVIG  EL +GVV  R  VT DE
Sbjct: 472 EERRIPLAIVIGEQELKDGVVKLRNVVTRDE 502


>Z69384-1|CAA93416.1|  520|Caenorhabditis elegans Hypothetical
           protein T11G6.1a protein.
          Length = 520

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 16/31 (51%), Positives = 18/31 (58%)
 Frame = +3

Query: 186 ESELSPDSIVIGVSELWEGVVLFRPSVTDDE 278
           E    P +IVIG  EL +GVV  R  VT DE
Sbjct: 471 EERRIPLAIVIGEQELKDGVVKLRNVVTRDE 501


>U39849-3|AAN63461.1|   83|Caenorhabditis elegans Hypothetical
           protein C06A8.8b protein.
          Length = 83

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -2

Query: 130 AVETTCSKSAPVHLSGSASATAS 62
           A++T+C KSAPV  S S+   +S
Sbjct: 53  AIDTSCEKSAPVSSSSSSKQQSS 75


>U39849-2|AAN63462.2|  370|Caenorhabditis elegans Hypothetical
           protein C06A8.8a protein.
          Length = 370

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -2

Query: 130 AVETTCSKSAPVHLSGSASATAS 62
           A++T+C KSAPV  S S+   +S
Sbjct: 245 AIDTSCEKSAPVSSSSSSKQQSS 267


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,120,597
Number of Sequences: 27780
Number of extensions: 120414
Number of successful extensions: 248
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 248
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 451081596
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)