Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1a05
         (559 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98185-1|CAA66860.1|  123|Anopheles gambiae histone H2B protein.       94   3e-21
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    29   0.078
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    26   0.96 
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   3.9  

>X98185-1|CAA66860.1|  123|Anopheles gambiae histone H2B protein.
          Length = 123

 Score = 93.9 bits (223), Expect = 3e-21
 Identities = 48/84 (57%), Positives = 66/84 (78%)
 Frame = +1

Query: 148 IYLYKLLRAVTQDNLGISRKSMLIMNNFVNDMLEKIAVEAGRLVAHGKKNTLGSREIQSA 327
           IY+YK+L+ V  D  GIS K+M IMN+FVND+ E+IA ++ RL  + K++T+ SREIQ+A
Sbjct: 38  IYIYKVLKQVHPDT-GISSKAMSIMNSFVNDIFERIARKS-RLAHYNKRSTITSREIQTA 95

Query: 328 VKLLVPGELATHANSEGMKAISMY 399
           V+LL+PGELA HA SEG KA++ Y
Sbjct: 96  VRLLLPGELAKHAVSEGTKAVTKY 119


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 29.5 bits (63), Expect = 0.078
 Identities = 15/60 (25%), Positives = 31/60 (51%)
 Frame = +3

Query: 255 RRGSRKAGRPRQEEYSGQQRNPICRQVTSTGRAGHTRQLRGHEGHKHVPFEQKERLQKQR 434
           R   +  G+PR ++   QQ+ P  +Q     R    +Q   H+G ++VP + +++  +Q+
Sbjct: 245 RYRGKATGKPRSQQQPQQQQQPQQKQQQLQRRQQQQQQ---HQGQRYVPPQLRQQAHQQQ 301


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 25.8 bits (54), Expect = 0.96
 Identities = 15/53 (28%), Positives = 23/53 (43%)
 Frame = +3

Query: 276 GRPRQEEYSGQQRNPICRQVTSTGRAGHTRQLRGHEGHKHVPFEQKERLQKQR 434
           G P Q  YS Q  NP+     ++  +  T  + G  GH+        +LQ Q+
Sbjct: 58  GTPHQAHYSPQSYNPLAGAGATSVNSASTGAVGG--GHQSTDMVDYTQLQPQK 108


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = -3

Query: 296 FFLPWATSLPASTAIFSSISLTKLFMINIDFLEMP--RLSC 180
           F  P+ +  P + A  + ISL +L   ++  LE+P  RL C
Sbjct: 68  FSFPFFSFAPCTLASATEISLPELVTRSLSNLELPSCRLPC 108


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 474,122
Number of Sequences: 2352
Number of extensions: 8128
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52142868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)