Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1a05
(559 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93388-7|CAB07654.1| 141|Caenorhabditis elegans Hypothetical pr... 106 9e-24
U64845-7|AAC48023.1| 123|Caenorhabditis elegans Histone protein... 106 9e-24
U64843-7|AAF98225.1| 123|Caenorhabditis elegans Histone protein... 106 9e-24
U64843-6|AAF98230.1| 123|Caenorhabditis elegans Histone protein... 106 9e-24
AC024696-7|AAK84513.1| 141|Caenorhabditis elegans Histone prote... 106 9e-24
AC024696-6|AAK84507.1| 141|Caenorhabditis elegans Histone prote... 106 9e-24
Z70750-5|CAA94740.1| 123|Caenorhabditis elegans Hypothetical pr... 106 1e-23
Z83245-9|CAB05832.1| 122|Caenorhabditis elegans Hypothetical pr... 105 2e-23
Z83245-5|CAB05830.1| 122|Caenorhabditis elegans Hypothetical pr... 105 2e-23
Z81495-1|CAB04061.1| 122|Caenorhabditis elegans Hypothetical pr... 105 2e-23
X15633-2|CAA33642.1| 122|Caenorhabditis elegans histone protein... 105 2e-23
U40934-8|AAK84525.1| 122|Caenorhabditis elegans Histone protein... 105 2e-23
AF047656-5|AAC05103.1| 122|Caenorhabditis elegans Histone prote... 105 2e-23
Z92789-3|CAB07220.1| 123|Caenorhabditis elegans Hypothetical pr... 104 4e-23
Z82271-3|CAB05211.1| 123|Caenorhabditis elegans Hypothetical pr... 104 4e-23
Z73102-9|CAA97413.1| 123|Caenorhabditis elegans Hypothetical pr... 104 4e-23
U58750-8|AAB00648.1| 123|Caenorhabditis elegans Histone protein... 104 4e-23
U64845-11|AAC48034.2| 108|Caenorhabditis elegans Histone protei... 99 2e-21
AF038619-6|AAB92077.2| 442|Caenorhabditis elegans Hypothetical ... 29 3.0
Z83105-11|CAB05485.2| 345|Caenorhabditis elegans Hypothetical p... 27 6.9
U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction... 27 6.9
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction... 27 6.9
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 27 6.9
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 27 6.9
AF039036-3|AAB94166.1| 137|Caenorhabditis elegans Neuropeptide-... 27 9.1
>Z93388-7|CAB07654.1| 141|Caenorhabditis elegans Hypothetical
protein T10C6.11 protein.
Length = 141
Score = 106 bits (255), Expect = 9e-24
Identities = 56/122 (45%), Positives = 78/122 (63%)
Frame = +1
Query: 34 MAPTKVPKKPLKSMEKVVDXXXXXXXXXXXXXNYQSFSIYLYKLLRAVTQDNLGISRKSM 213
MAP K K K K V +S+S+Y+Y++L+ V D G+S K+M
Sbjct: 19 MAPPKPSAKGAKKAAKTVTKPKDGKKRRHARK--ESYSVYIYRVLKQVHPDT-GVSSKAM 75
Query: 214 LIMNNFVNDMLEKIAVEAGRLVAHGKKNTLGSREIQSAVKLLVPGELATHANSEGMKAIS 393
IMN+FVND+ E+IA EA RL + K++T+ SREIQ+AV+L++PGELA HA SEG KA++
Sbjct: 76 SIMNSFVNDVFERIAAEASRLAHYNKRSTISSREIQTAVRLILPGELAKHAVSEGTKAVT 135
Query: 394 MY 399
Y
Sbjct: 136 KY 137
>U64845-7|AAC48023.1| 123|Caenorhabditis elegans Histone protein 8
protein.
Length = 123
Score = 106 bits (255), Expect = 9e-24
Identities = 56/122 (45%), Positives = 78/122 (63%)
Frame = +1
Query: 34 MAPTKVPKKPLKSMEKVVDXXXXXXXXXXXXXNYQSFSIYLYKLLRAVTQDNLGISRKSM 213
MAP K K K K V +S+S+Y+Y++L+ V D G+S K+M
Sbjct: 1 MAPPKPSAKGAKKAAKTVTKPKDGKKRRHARK--ESYSVYIYRVLKQVHPDT-GVSSKAM 57
Query: 214 LIMNNFVNDMLEKIAVEAGRLVAHGKKNTLGSREIQSAVKLLVPGELATHANSEGMKAIS 393
IMN+FVND+ E+IA EA RL + K++T+ SREIQ+AV+L++PGELA HA SEG KA++
Sbjct: 58 SIMNSFVNDVFERIAAEASRLAHYNKRSTISSREIQTAVRLILPGELAKHAVSEGTKAVT 117
Query: 394 MY 399
Y
Sbjct: 118 KY 119
>U64843-7|AAF98225.1| 123|Caenorhabditis elegans Histone protein 20
protein.
Length = 123
Score = 106 bits (255), Expect = 9e-24
Identities = 56/122 (45%), Positives = 78/122 (63%)
Frame = +1
Query: 34 MAPTKVPKKPLKSMEKVVDXXXXXXXXXXXXXNYQSFSIYLYKLLRAVTQDNLGISRKSM 213
MAP K K K K V +S+S+Y+Y++L+ V D G+S K+M
Sbjct: 1 MAPPKPSAKGAKKAAKTVTKPKDGKKRRHARK--ESYSVYIYRVLKQVHPDT-GVSSKAM 57
Query: 214 LIMNNFVNDMLEKIAVEAGRLVAHGKKNTLGSREIQSAVKLLVPGELATHANSEGMKAIS 393
IMN+FVND+ E+IA EA RL + K++T+ SREIQ+AV+L++PGELA HA SEG KA++
Sbjct: 58 SIMNSFVNDVFERIAAEASRLAHYNKRSTISSREIQTAVRLILPGELAKHAVSEGTKAVT 117
Query: 394 MY 399
Y
Sbjct: 118 KY 119
>U64843-6|AAF98230.1| 123|Caenorhabditis elegans Histone protein 22
protein.
Length = 123
Score = 106 bits (255), Expect = 9e-24
Identities = 56/122 (45%), Positives = 78/122 (63%)
Frame = +1
Query: 34 MAPTKVPKKPLKSMEKVVDXXXXXXXXXXXXXNYQSFSIYLYKLLRAVTQDNLGISRKSM 213
MAP K K K K V +S+S+Y+Y++L+ V D G+S K+M
Sbjct: 1 MAPPKPSAKGAKKAAKTVTKPKDGKKRRHARK--ESYSVYIYRVLKQVHPDT-GVSSKAM 57
Query: 214 LIMNNFVNDMLEKIAVEAGRLVAHGKKNTLGSREIQSAVKLLVPGELATHANSEGMKAIS 393
IMN+FVND+ E+IA EA RL + K++T+ SREIQ+AV+L++PGELA HA SEG KA++
Sbjct: 58 SIMNSFVNDVFERIAAEASRLAHYNKRSTISSREIQTAVRLILPGELAKHAVSEGTKAVT 117
Query: 394 MY 399
Y
Sbjct: 118 KY 119
>AC024696-7|AAK84513.1| 141|Caenorhabditis elegans Histone protein
54 protein.
Length = 141
Score = 106 bits (255), Expect = 9e-24
Identities = 56/122 (45%), Positives = 78/122 (63%)
Frame = +1
Query: 34 MAPTKVPKKPLKSMEKVVDXXXXXXXXXXXXXNYQSFSIYLYKLLRAVTQDNLGISRKSM 213
MAP K K K K V +S+S+Y+Y++L+ V D G+S K+M
Sbjct: 19 MAPPKPSAKGAKKAAKTVTKPKDGKKRRHARK--ESYSVYIYRVLKQVHPDT-GVSSKAM 75
Query: 214 LIMNNFVNDMLEKIAVEAGRLVAHGKKNTLGSREIQSAVKLLVPGELATHANSEGMKAIS 393
IMN+FVND+ E+IA EA RL + K++T+ SREIQ+AV+L++PGELA HA SEG KA++
Sbjct: 76 SIMNSFVNDVFERIAAEASRLAHYNKRSTISSREIQTAVRLILPGELAKHAVSEGTKAVT 135
Query: 394 MY 399
Y
Sbjct: 136 KY 137
>AC024696-6|AAK84507.1| 141|Caenorhabditis elegans Histone protein
52 protein.
Length = 141
Score = 106 bits (255), Expect = 9e-24
Identities = 56/122 (45%), Positives = 78/122 (63%)
Frame = +1
Query: 34 MAPTKVPKKPLKSMEKVVDXXXXXXXXXXXXXNYQSFSIYLYKLLRAVTQDNLGISRKSM 213
MAP K K K K V +S+S+Y+Y++L+ V D G+S K+M
Sbjct: 19 MAPPKPSAKGAKKAAKTVTKPKDGKKRRHARK--ESYSVYIYRVLKQVHPDT-GVSSKAM 75
Query: 214 LIMNNFVNDMLEKIAVEAGRLVAHGKKNTLGSREIQSAVKLLVPGELATHANSEGMKAIS 393
IMN+FVND+ E+IA EA RL + K++T+ SREIQ+AV+L++PGELA HA SEG KA++
Sbjct: 76 SIMNSFVNDVFERIAAEASRLAHYNKRSTISSREIQTAVRLILPGELAKHAVSEGTKAVT 135
Query: 394 MY 399
Y
Sbjct: 136 KY 137
>Z70750-5|CAA94740.1| 123|Caenorhabditis elegans Hypothetical
protein C50F4.5 protein.
Length = 123
Score = 106 bits (254), Expect = 1e-23
Identities = 56/122 (45%), Positives = 78/122 (63%)
Frame = +1
Query: 34 MAPTKVPKKPLKSMEKVVDXXXXXXXXXXXXXNYQSFSIYLYKLLRAVTQDNLGISRKSM 213
MAP K K K K V +S+S+Y+Y++L+ V D G+S K+M
Sbjct: 1 MAPPKPSAKGAKKAAKTVSKPKDGKKRKHARK--ESYSVYIYRVLKQVHPDT-GVSSKAM 57
Query: 214 LIMNNFVNDMLEKIAVEAGRLVAHGKKNTLGSREIQSAVKLLVPGELATHANSEGMKAIS 393
IMN+FVND+ E+IA EA RL + K++T+ SREIQ+AV+L++PGELA HA SEG KA++
Sbjct: 58 SIMNSFVNDVFERIASEASRLAHYNKRSTISSREIQTAVRLILPGELAKHAVSEGTKAVT 117
Query: 394 MY 399
Y
Sbjct: 118 KY 119
>Z83245-9|CAB05832.1| 122|Caenorhabditis elegans Hypothetical
protein ZK131.9 protein.
Length = 122
Score = 105 bits (252), Expect = 2e-23
Identities = 48/88 (54%), Positives = 70/88 (79%)
Frame = +1
Query: 136 QSFSIYLYKLLRAVTQDNLGISRKSMLIMNNFVNDMLEKIAVEAGRLVAHGKKNTLGSRE 315
+S+S+Y+Y++L+ V D G+S K+M IMN+FVND+ E+IA EA RL + K++T+ SRE
Sbjct: 32 ESYSVYIYRVLKQVHPDT-GVSSKAMSIMNSFVNDVFERIAAEASRLAHYNKRSTISSRE 90
Query: 316 IQSAVKLLVPGELATHANSEGMKAISMY 399
IQ+AV+L++PGELA HA SEG KA++ Y
Sbjct: 91 IQTAVRLILPGELAKHAVSEGTKAVTKY 118
>Z83245-5|CAB05830.1| 122|Caenorhabditis elegans Hypothetical
protein ZK131.5 protein.
Length = 122
Score = 105 bits (252), Expect = 2e-23
Identities = 48/88 (54%), Positives = 70/88 (79%)
Frame = +1
Query: 136 QSFSIYLYKLLRAVTQDNLGISRKSMLIMNNFVNDMLEKIAVEAGRLVAHGKKNTLGSRE 315
+S+S+Y+Y++L+ V D G+S K+M IMN+FVND+ E+IA EA RL + K++T+ SRE
Sbjct: 32 ESYSVYIYRVLKQVHPDT-GVSSKAMSIMNSFVNDVFERIAAEASRLAHYNKRSTISSRE 90
Query: 316 IQSAVKLLVPGELATHANSEGMKAISMY 399
IQ+AV+L++PGELA HA SEG KA++ Y
Sbjct: 91 IQTAVRLILPGELAKHAVSEGTKAVTKY 118
>Z81495-1|CAB04061.1| 122|Caenorhabditis elegans Hypothetical
protein F08G2.1 protein.
Length = 122
Score = 105 bits (252), Expect = 2e-23
Identities = 48/88 (54%), Positives = 70/88 (79%)
Frame = +1
Query: 136 QSFSIYLYKLLRAVTQDNLGISRKSMLIMNNFVNDMLEKIAVEAGRLVAHGKKNTLGSRE 315
+S+S+Y+Y++L+ V D G+S K+M IMN+FVND+ E+IA EA RL + K++T+ SRE
Sbjct: 32 ESYSVYIYRVLKQVHPDT-GVSSKAMSIMNSFVNDVFERIAAEASRLAHYNKRSTISSRE 90
Query: 316 IQSAVKLLVPGELATHANSEGMKAISMY 399
IQ+AV+L++PGELA HA SEG KA++ Y
Sbjct: 91 IQTAVRLILPGELAKHAVSEGTKAVTKY 118
>X15633-2|CAA33642.1| 122|Caenorhabditis elegans histone protein
protein.
Length = 122
Score = 105 bits (252), Expect = 2e-23
Identities = 48/88 (54%), Positives = 70/88 (79%)
Frame = +1
Query: 136 QSFSIYLYKLLRAVTQDNLGISRKSMLIMNNFVNDMLEKIAVEAGRLVAHGKKNTLGSRE 315
+S+S+Y+Y++L+ V D G+S K+M IMN+FVND+ E+IA EA RL + K++T+ SRE
Sbjct: 32 ESYSVYIYRVLKQVHPDT-GVSSKAMSIMNSFVNDVFERIAAEASRLAHYNKRSTISSRE 90
Query: 316 IQSAVKLLVPGELATHANSEGMKAISMY 399
IQ+AV+L++PGELA HA SEG KA++ Y
Sbjct: 91 IQTAVRLILPGELAKHAVSEGTKAVTKY 118
>U40934-8|AAK84525.1| 122|Caenorhabditis elegans Histone protein 29
protein.
Length = 122
Score = 105 bits (252), Expect = 2e-23
Identities = 48/88 (54%), Positives = 70/88 (79%)
Frame = +1
Query: 136 QSFSIYLYKLLRAVTQDNLGISRKSMLIMNNFVNDMLEKIAVEAGRLVAHGKKNTLGSRE 315
+S+S+Y+Y++L+ V D G+S K+M IMN+FVND+ E+IA EA RL + K++T+ SRE
Sbjct: 32 ESYSVYIYRVLKQVHPDT-GVSSKAMSIMNSFVNDVFERIAAEASRLAHYNKRSTISSRE 90
Query: 316 IQSAVKLLVPGELATHANSEGMKAISMY 399
IQ+AV+L++PGELA HA SEG KA++ Y
Sbjct: 91 IQTAVRLILPGELAKHAVSEGTKAVTKY 118
>AF047656-5|AAC05103.1| 122|Caenorhabditis elegans Histone protein
34 protein.
Length = 122
Score = 105 bits (252), Expect = 2e-23
Identities = 48/88 (54%), Positives = 70/88 (79%)
Frame = +1
Query: 136 QSFSIYLYKLLRAVTQDNLGISRKSMLIMNNFVNDMLEKIAVEAGRLVAHGKKNTLGSRE 315
+S+S+Y+Y++L+ V D G+S K+M IMN+FVND+ E+IA EA RL + K++T+ SRE
Sbjct: 32 ESYSVYIYRVLKQVHPDT-GVSSKAMSIMNSFVNDVFERIAAEASRLAHYNKRSTISSRE 90
Query: 316 IQSAVKLLVPGELATHANSEGMKAISMY 399
IQ+AV+L++PGELA HA SEG KA++ Y
Sbjct: 91 IQTAVRLILPGELAKHAVSEGTKAVTKY 118
>Z92789-3|CAB07220.1| 123|Caenorhabditis elegans Hypothetical
protein H02I12.6 protein.
Length = 123
Score = 104 bits (250), Expect = 4e-23
Identities = 48/88 (54%), Positives = 70/88 (79%)
Frame = +1
Query: 136 QSFSIYLYKLLRAVTQDNLGISRKSMLIMNNFVNDMLEKIAVEAGRLVAHGKKNTLGSRE 315
+S+S+Y+Y++L+ V D G+S K+M IMN+FVND+ E+IA EA RL + K++T+ SRE
Sbjct: 33 ESYSVYIYRVLKQVHPDT-GVSSKAMSIMNSFVNDVFERIASEASRLAHYNKRSTISSRE 91
Query: 316 IQSAVKLLVPGELATHANSEGMKAISMY 399
IQ+AV+L++PGELA HA SEG KA++ Y
Sbjct: 92 IQTAVRLILPGELAKHAVSEGTKAVTKY 119
>Z82271-3|CAB05211.1| 123|Caenorhabditis elegans Hypothetical
protein F54E12.4 protein.
Length = 123
Score = 104 bits (250), Expect = 4e-23
Identities = 48/88 (54%), Positives = 70/88 (79%)
Frame = +1
Query: 136 QSFSIYLYKLLRAVTQDNLGISRKSMLIMNNFVNDMLEKIAVEAGRLVAHGKKNTLGSRE 315
+S+S+Y+Y++L+ V D G+S K+M IMN+FVND+ E+IA EA RL + K++T+ SRE
Sbjct: 33 ESYSVYIYRVLKQVHPDT-GVSSKAMSIMNSFVNDVFERIASEASRLAHYNKRSTISSRE 91
Query: 316 IQSAVKLLVPGELATHANSEGMKAISMY 399
IQ+AV+L++PGELA HA SEG KA++ Y
Sbjct: 92 IQTAVRLILPGELAKHAVSEGTKAVTKY 119
>Z73102-9|CAA97413.1| 123|Caenorhabditis elegans Hypothetical
protein B0035.8 protein.
Length = 123
Score = 104 bits (250), Expect = 4e-23
Identities = 48/88 (54%), Positives = 70/88 (79%)
Frame = +1
Query: 136 QSFSIYLYKLLRAVTQDNLGISRKSMLIMNNFVNDMLEKIAVEAGRLVAHGKKNTLGSRE 315
+S+S+Y+Y++L+ V D G+S K+M IMN+FVND+ E+IA EA RL + K++T+ SRE
Sbjct: 33 ESYSVYIYRVLKQVHPDT-GVSSKAMSIMNSFVNDVFERIASEASRLAHYNKRSTISSRE 91
Query: 316 IQSAVKLLVPGELATHANSEGMKAISMY 399
IQ+AV+L++PGELA HA SEG KA++ Y
Sbjct: 92 IQTAVRLILPGELAKHAVSEGTKAVTKY 119
>U58750-8|AAB00648.1| 123|Caenorhabditis elegans Histone protein 62
protein.
Length = 123
Score = 104 bits (250), Expect = 4e-23
Identities = 48/88 (54%), Positives = 70/88 (79%)
Frame = +1
Query: 136 QSFSIYLYKLLRAVTQDNLGISRKSMLIMNNFVNDMLEKIAVEAGRLVAHGKKNTLGSRE 315
+S+S+Y+Y++L+ V D G+S K+M IMN+FVND+ E+IA EA RL + K++T+ SRE
Sbjct: 33 ESYSVYIYRVLKQVHPDT-GVSSKAMSIMNSFVNDVFERIASEASRLAHYNKRSTISSRE 91
Query: 316 IQSAVKLLVPGELATHANSEGMKAISMY 399
IQ+AV+L++PGELA HA SEG KA++ Y
Sbjct: 92 IQTAVRLILPGELAKHAVSEGTKAVTKY 119
>U64845-11|AAC48034.2| 108|Caenorhabditis elegans Histone protein
39 protein.
Length = 108
Score = 98.7 bits (235), Expect = 2e-21
Identities = 45/88 (51%), Positives = 69/88 (78%)
Frame = +1
Query: 136 QSFSIYLYKLLRAVTQDNLGISRKSMLIMNNFVNDMLEKIAVEAGRLVAHGKKNTLGSRE 315
+S+S+Y++++L+ V D G+S K+M IMN+FVND+ E+IA EA RL + K++T+ SRE
Sbjct: 18 ESYSLYIFRVLKQVHPDT-GVSSKAMSIMNSFVNDVFERIAAEASRLAHYNKRSTISSRE 76
Query: 316 IQSAVKLLVPGELATHANSEGMKAISMY 399
IQ+AV+L++PGELA +A SEG A++ Y
Sbjct: 77 IQTAVRLILPGELAKNAVSEGTNAVTKY 104
>AF038619-6|AAB92077.2| 442|Caenorhabditis elegans Hypothetical
protein F56A11.6 protein.
Length = 442
Score = 28.7 bits (61), Expect = 3.0
Identities = 23/88 (26%), Positives = 38/88 (43%)
Frame = +3
Query: 171 GRHARQPGHLEEVDVDHE*LR*RYAGEDRRGSRKAGRPRQEEYSGQQRNPICRQVTSTGR 350
G +R P + VD + R + +DR SRK R E S + R R+ + R
Sbjct: 283 GEKSRSPRKSHQKSVDRDKTR---SDKDRSRSRKDREDRDRERSRKDREDRDRERSRKER 339
Query: 351 AGHTRQLRGHEGHKHVPFEQKERLQKQR 434
+R+ R + E+++R +K R
Sbjct: 340 EDRSRKDREDRERERSRKEREDRSRKDR 367
>Z83105-11|CAB05485.2| 345|Caenorhabditis elegans Hypothetical
protein F14H3.11 protein.
Length = 345
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +1
Query: 160 KLLRAVTQDNLGISRKSMLIMNNFVNDMLEKIAVEAGRLVAHGKKNTLGSR 312
K L A + + SRK++ ++NF +LE++ EA + HG+ T +
Sbjct: 69 KCLEAGMLEKMVFSRKAIYSISNFEKSILEELE-EAYSKLEHGRNETFNPK 118
>U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction
molecule protein1, isoform b protein.
Length = 944
Score = 27.5 bits (58), Expect = 6.9
Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = +3
Query: 201 EEVDVDHE*LR*RYAGEDRRGSRK-AGRPRQEEYSGQQRNPICRQVTSTGRAGHTRQLRG 377
EE VD++ R E R R+ R +QEE + R R++ + +LR
Sbjct: 250 EEKTVDYKVTYHRDIEEQERRIREDQARRQQEEQDRRDREDNARRILAQREHQEMERLRE 309
Query: 378 HEGHKHVPFEQKERLQKQRL 437
+ ++ER K+RL
Sbjct: 310 QQNLSERALAERERADKERL 329
>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
molecule protein1, isoform c protein.
Length = 1148
Score = 27.5 bits (58), Expect = 6.9
Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = +3
Query: 201 EEVDVDHE*LR*RYAGEDRRGSRK-AGRPRQEEYSGQQRNPICRQVTSTGRAGHTRQLRG 377
EE VD++ R E R R+ R +QEE + R R++ + +LR
Sbjct: 250 EEKTVDYKVTYHRDIEEQERRIREDQARRQQEEQDRRDREDNARRILAQREHQEMERLRE 309
Query: 378 HEGHKHVPFEQKERLQKQRL 437
+ ++ER K+RL
Sbjct: 310 QQNLSERALAERERADKERL 329
>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
molecule protein1, isoform d protein.
Length = 1439
Score = 27.5 bits (58), Expect = 6.9
Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = +3
Query: 201 EEVDVDHE*LR*RYAGEDRRGSRK-AGRPRQEEYSGQQRNPICRQVTSTGRAGHTRQLRG 377
EE VD++ R E R R+ R +QEE + R R++ + +LR
Sbjct: 250 EEKTVDYKVTYHRDIEEQERRIREDQARRQQEEQDRRDREDNARRILAQREHQEMERLRE 309
Query: 378 HEGHKHVPFEQKERLQKQRL 437
+ ++ER K+RL
Sbjct: 310 QQNLSERALAERERADKERL 329
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 27.5 bits (58), Expect = 6.9
Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = +3
Query: 201 EEVDVDHE*LR*RYAGEDRRGSRK-AGRPRQEEYSGQQRNPICRQVTSTGRAGHTRQLRG 377
EE VD++ R E R R+ R +QEE + R R++ + +LR
Sbjct: 250 EEKTVDYKVTYHRDIEEQERRIREDQARRQQEEQDRRDREDNARRILAQREHQEMERLRE 309
Query: 378 HEGHKHVPFEQKERLQKQRL 437
+ ++ER K+RL
Sbjct: 310 QQNLSERALAERERADKERL 329
>AF039036-3|AAB94166.1| 137|Caenorhabditis elegans
Neuropeptide-like protein protein13 protein.
Length = 137
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 271 RLVAHGKKNTLGSREIQSAVKLLVPGELATHANSEGMKAISMY 399
R++A GK+ R+I S K P + + S G ++ SMY
Sbjct: 55 RIMAFGKRQPSYDRDIMSFGKRSAPSDFSRDIMSFGKRSSSMY 97
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,503,766
Number of Sequences: 27780
Number of extensions: 194495
Number of successful extensions: 577
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 576
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -