Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1a02
         (702 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    27   0.76 
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    25   1.7  
DQ007318-1|AAY24700.1|  153|Anopheles gambiae lysozyme c-4 protein.    25   2.3  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   2.3  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   2.3  
AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein p...    25   3.0  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   7.0  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       23   7.0  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    23   7.0  

>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
            gambiae T1 retroposon. ).
          Length = 975

 Score = 26.6 bits (56), Expect = 0.76
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = -2

Query: 545  SAAVRTRAPLLAICAHTSSS*KIPAYSLLFKYNYFGYEITFRSS-N*FKNVI 393
            S ++R R PL     HT  +   P  S    +N+F Y   F SS N F+N I
Sbjct: 918  SRSLRPRDPLSIETRHTLYTFNDPILSCFRLFNHFYYLFDFDSSLNSFRNRI 969


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 610  HQCFRSQDRLPPSPLLGFCLPKKECSRSLRT 702
            H  +   +++ PSPL G  +P K   RSLR+
Sbjct: 1276 HSLYAIPNKVKPSPLAGAAVP-KPMDRSLRS 1305


>DQ007318-1|AAY24700.1|  153|Anopheles gambiae lysozyme c-4 protein.
          Length = 153

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
 Frame = +1

Query: 496 VCAHMARSGARVRTAALRPRPGAGVGLARVGA--WCQ 600
           VC  MA SGA        P   A  G+ ++ +  WC+
Sbjct: 58  VCLVMAESGADTSKVTKLPNDSANYGIFQINSKTWCR 94


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
 Frame = +3

Query: 552  SAGRWRWTGACGCVVPMDATSVLSFTRSS--SAFTPPRLLFT 671
            S GRW+W G  G +        L  TRS   SA   P++ F+
Sbjct: 1344 SDGRWKWNG--GTIQIEQGNHFLHLTRSGSVSATLMPKIQFS 1383


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
 Frame = +3

Query: 552  SAGRWRWTGACGCVVPMDATSVLSFTRSS--SAFTPPRLLFT 671
            S GRW+W G  G +        L  TRS   SA   P++ F+
Sbjct: 1345 SDGRWKWNG--GTIQIEQGNHFLHLTRSGSVSATLMPKIQFS 1384


>AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein
           protein.
          Length = 285

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = -3

Query: 622 ESTDVASIGT-THPHAPVQRQRPAEGGAPRFARVPH 518
           E+   AS+   T P A   +Q+PA    PR  R+P+
Sbjct: 22  EAEQAASLAANTPPSASQPKQKPAPAFNPRAGRMPN 57


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -2

Query: 599  WHHAPTRASPTPAPGRGRSAA 537
            W H P   +P  A  RGR+ A
Sbjct: 1159 WRHVPGIHNPADAVSRGRNPA 1179


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = -3

Query: 649 VKAEDDLVNESTDVASIGTTHPHAPVQRQRPAEGGAPRFARVP 521
           V  E+ L+ EST      T H H   QR+ P   G P  ++ P
Sbjct: 365 VDVENHLMGEST------TIHWHGLHQRRTPYMDGVPHVSQCP 401


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 216 HYCDYCQTIL 187
           +YCDYC T L
Sbjct: 4   YYCDYCDTYL 13


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 782,048
Number of Sequences: 2352
Number of extensions: 16998
Number of successful extensions: 36
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)