Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1a02
(702 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z81128-1|CAB03398.1| 568|Caenorhabditis elegans Hypothetical pr... 29 3.2
AF013953-1|AAC47750.1| 568|Caenorhabditis elegans mom-5 protein. 29 3.2
Z81096-8|CAD54149.2| 922|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z81096-6|CAJ80827.1| 691|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z81096-5|CAD54150.1| 507|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z81096-4|CAB54264.2| 689|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z81096-3|CAB54265.2| 747|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z78065-11|CAD54155.2| 922|Caenorhabditis elegans Hypothetical p... 29 4.3
Z78065-10|CAJ80826.1| 691|Caenorhabditis elegans Hypothetical p... 29 4.3
Z78065-8|CAD54156.1| 507|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z78065-7|CAB54297.2| 689|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z78065-6|CAB54298.2| 747|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z78065-1|CAD54154.1| 547|Caenorhabditis elegans Hypothetical pr... 29 4.3
U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical p... 28 7.4
>Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical
protein F52H3.7a protein.
Length = 1245
Score = 33.1 bits (72), Expect = 0.20
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = -3
Query: 643 AEDDLVNESTDVASIGTTHPHAPVQRQRPAEGGAPRFARVPH 518
A D V+E T + S TH APV PAE A PH
Sbjct: 464 APADKVHEETKIDSAAETHADAPVVDASPAEDQASEVTEAPH 505
>Z81128-1|CAB03398.1| 568|Caenorhabditis elegans Hypothetical
protein T23D8.1 protein.
Length = 568
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +1
Query: 589 AWCQ-WTRHQCFRSQDRLPPSPLLGFCLPKKEC 684
AW + W H+C R QDR L GF P +C
Sbjct: 475 AWLEGWLHHRCVRLQDR----ELFGFTYPVDDC 503
>AF013953-1|AAC47750.1| 568|Caenorhabditis elegans mom-5 protein.
Length = 568
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +1
Query: 589 AWCQ-WTRHQCFRSQDRLPPSPLLGFCLPKKEC 684
AW + W H+C R QDR L GF P +C
Sbjct: 475 AWLEGWLHHRCVRLQDR----ELFGFTYPVDDC 503
>Z81096-8|CAD54149.2| 922|Caenorhabditis elegans Hypothetical
protein T09E8.1c protein.
Length = 922
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = -3
Query: 292 PHPTSRTSSRCTEFNRVPDYIHGDRPLLRLLSDDTVNRDDKSSSLE 155
P + +SS+ + FN + ++ L+ +SD+ N+D K +SLE
Sbjct: 543 PSQSRHSSSKSSHFNGSSNLSTSEQLRLQEMSDELANKDRKVTSLE 588
>Z81096-6|CAJ80827.1| 691|Caenorhabditis elegans Hypothetical
protein T09E8.1f protein.
Length = 691
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = -3
Query: 292 PHPTSRTSSRCTEFNRVPDYIHGDRPLLRLLSDDTVNRDDKSSSLE 155
P + +SS+ + FN + ++ L+ +SD+ N+D K +SLE
Sbjct: 312 PSQSRHSSSKSSHFNGSSNLSTSEQLRLQEMSDELANKDRKVTSLE 357
>Z81096-5|CAD54150.1| 507|Caenorhabditis elegans Hypothetical
protein T09E8.1e protein.
Length = 507
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = -3
Query: 292 PHPTSRTSSRCTEFNRVPDYIHGDRPLLRLLSDDTVNRDDKSSSLE 155
P + +SS+ + FN + ++ L+ +SD+ N+D K +SLE
Sbjct: 128 PSQSRHSSSKSSHFNGSSNLSTSEQLRLQEMSDELANKDRKVTSLE 173
>Z81096-4|CAB54264.2| 689|Caenorhabditis elegans Hypothetical
protein T09E8.1b protein.
Length = 689
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = -3
Query: 292 PHPTSRTSSRCTEFNRVPDYIHGDRPLLRLLSDDTVNRDDKSSSLE 155
P + +SS+ + FN + ++ L+ +SD+ N+D K +SLE
Sbjct: 310 PSQSRHSSSKSSHFNGSSNLSTSEQLRLQEMSDELANKDRKVTSLE 355
>Z81096-3|CAB54265.2| 747|Caenorhabditis elegans Hypothetical
protein T09E8.1a protein.
Length = 747
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = -3
Query: 292 PHPTSRTSSRCTEFNRVPDYIHGDRPLLRLLSDDTVNRDDKSSSLE 155
P + +SS+ + FN + ++ L+ +SD+ N+D K +SLE
Sbjct: 368 PSQSRHSSSKSSHFNGSSNLSTSEQLRLQEMSDELANKDRKVTSLE 413
>Z78065-11|CAD54155.2| 922|Caenorhabditis elegans Hypothetical
protein T09E8.1c protein.
Length = 922
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = -3
Query: 292 PHPTSRTSSRCTEFNRVPDYIHGDRPLLRLLSDDTVNRDDKSSSLE 155
P + +SS+ + FN + ++ L+ +SD+ N+D K +SLE
Sbjct: 543 PSQSRHSSSKSSHFNGSSNLSTSEQLRLQEMSDELANKDRKVTSLE 588
>Z78065-10|CAJ80826.1| 691|Caenorhabditis elegans Hypothetical
protein T09E8.1f protein.
Length = 691
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = -3
Query: 292 PHPTSRTSSRCTEFNRVPDYIHGDRPLLRLLSDDTVNRDDKSSSLE 155
P + +SS+ + FN + ++ L+ +SD+ N+D K +SLE
Sbjct: 312 PSQSRHSSSKSSHFNGSSNLSTSEQLRLQEMSDELANKDRKVTSLE 357
>Z78065-8|CAD54156.1| 507|Caenorhabditis elegans Hypothetical
protein T09E8.1e protein.
Length = 507
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = -3
Query: 292 PHPTSRTSSRCTEFNRVPDYIHGDRPLLRLLSDDTVNRDDKSSSLE 155
P + +SS+ + FN + ++ L+ +SD+ N+D K +SLE
Sbjct: 128 PSQSRHSSSKSSHFNGSSNLSTSEQLRLQEMSDELANKDRKVTSLE 173
>Z78065-7|CAB54297.2| 689|Caenorhabditis elegans Hypothetical
protein T09E8.1b protein.
Length = 689
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = -3
Query: 292 PHPTSRTSSRCTEFNRVPDYIHGDRPLLRLLSDDTVNRDDKSSSLE 155
P + +SS+ + FN + ++ L+ +SD+ N+D K +SLE
Sbjct: 310 PSQSRHSSSKSSHFNGSSNLSTSEQLRLQEMSDELANKDRKVTSLE 355
>Z78065-6|CAB54298.2| 747|Caenorhabditis elegans Hypothetical
protein T09E8.1a protein.
Length = 747
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = -3
Query: 292 PHPTSRTSSRCTEFNRVPDYIHGDRPLLRLLSDDTVNRDDKSSSLE 155
P + +SS+ + FN + ++ L+ +SD+ N+D K +SLE
Sbjct: 368 PSQSRHSSSKSSHFNGSSNLSTSEQLRLQEMSDELANKDRKVTSLE 413
>Z78065-1|CAD54154.1| 547|Caenorhabditis elegans Hypothetical
protein T09E8.1d protein.
Length = 547
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = -3
Query: 292 PHPTSRTSSRCTEFNRVPDYIHGDRPLLRLLSDDTVNRDDKSSSLE 155
P + +SS+ + FN + ++ L+ +SD+ N+D K +SLE
Sbjct: 168 PSQSRHSSSKSSHFNGSSNLSTSEQLRLQEMSDELANKDRKVTSLE 213
>U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical
protein R11G1.1 protein.
Length = 1656
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -1
Query: 603 PLAPRTHTRQSNASARPRAERRGSHACPTSSHMRTH 496
P+ P H R + S +PR R SH TS + H
Sbjct: 1588 PITPSRHVRTAANSPQPRHRRSDSHFSMTSLPLIAH 1623
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,167,901
Number of Sequences: 27780
Number of extensions: 382271
Number of successful extensions: 960
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 960
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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