Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1a01
         (737 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00033-13|AAC48300.1|  439|Caenorhabditis elegans Mechanosensory...   170   1e-42
U50068-4|AAB37733.1|  287|Caenorhabditis elegans Hypothetical pr...    39   0.003
Z71181-2|CAA94895.1|  301|Caenorhabditis elegans Hypothetical pr...    39   0.004
U55368-5|AAA97992.2|  333|Caenorhabditis elegans Hypothetical pr...    33   0.21 
Z81088-2|CAB03127.1|  297|Caenorhabditis elegans Hypothetical pr...    31   0.85 
U21324-6|AAA62562.1|  287|Caenorhabditis elegans Hypothetical pr...    31   0.85 
Z81088-3|CAB03128.1|  283|Caenorhabditis elegans Hypothetical pr...    31   1.1  

>U00033-13|AAC48300.1|  439|Caenorhabditis elegans Mechanosensory
           abnormality protein14 protein.
          Length = 439

 Score =  170 bits (413), Expect = 1e-42
 Identities = 90/232 (38%), Positives = 136/232 (58%), Gaps = 3/232 (1%)
 Frame = +3

Query: 51  MRYNELGTTGIKVSHISVGSAAFSNIYGKYDEKRSLELIKESLNLGINYLETGPWYGQGS 230
           M Y ++  T I++S I  G+AA   ++G  ++   +++++ ++  GINY++TG WY Q  
Sbjct: 83  MNYRQIPGTDIRMSKIGFGAAAIGGMFGNVEDS-IIKIVETAIKQGINYIDTGYWYSQSR 141

Query: 231 SEKVIGKALVGVPRDSYYIGSKVGRYDKDTLKMFDFSAEKTAAGLDNTLSLLGLDYVDL- 407
           SE ++GKAL  +PR +YYI +KVGR++ D  + FDF A+K    L N+L  L L Y+D+ 
Sbjct: 142 SESILGKALSKIPRKAYYISTKVGRFELDYARTFDFRADKILESLTNSLKRLQLTYIDIC 201

Query: 408 -IQVHDITFAPDTSVVLKETLPVLEQAVRDGKARFIGIADYDIDLMKXXXXXXXXKISTI 584
            +Q+HD  FAP+ S+VL ETL  LE A   GK R IG+  Y +                 
Sbjct: 202 YVQIHDADFAPNESIVLYETLQALEMAKSSGKIRHIGLTGYPLGK--------------- 246

Query: 585 LSYSKSTLFD-NRLQNYISFFKSKGVGVINAAATGMGLLTNKGPQPWHPASD 737
           L YS   +++  +L   ++   ++ + VIN+ A   GLLT KGP PWHPASD
Sbjct: 247 LVYSFRYVWNAPKLYFSVNLSITRNIAVINSGALCWGLLTEKGPPPWHPASD 298


>U50068-4|AAB37733.1|  287|Caenorhabditis elegans Hypothetical
           protein C01G5.5 protein.
          Length = 287

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 14/147 (9%)
 Frame = +3

Query: 132 GKYDEK--RSLELIKESLNLGINYLETGPWYGQGSSEKVIGKALVGV-PR-----DSYYI 287
           G Y+ K  +    + E+L +G    +T  +Y    +EK +G AL  + PR     +  Y+
Sbjct: 16  GTYEAKGDQLFAAVDEALKVGYRSFDTAKYY---ENEKDLGLALKTLLPRHNICSEDIYL 72

Query: 288 GSKVGRYDKDTLKMFDFSAEKTAAGLDNTLSLLGLDYVDLIQVH------DITFAPDTSV 449
            SKV  Y          +AE     ++ +L LL   Y+DL+ VH            +  +
Sbjct: 73  TSKVFPYSSKN------AAELIRKDVNESLELLDRKYLDLVLVHYPRPLDTEDLNENNKM 126

Query: 450 VLKETLPVLEQAVRDGKARFIGIADYD 530
             K+T   LE+   +GK R IG+++Y+
Sbjct: 127 YRKDTWIALEKLHAEGKIRSIGVSNYE 153


>Z71181-2|CAA94895.1|  301|Caenorhabditis elegans Hypothetical
           protein K07C5.2 protein.
          Length = 301

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 14/137 (10%)
 Frame = +3

Query: 165 IKESLNLGINYLETGPWYGQGSSEKVIGKAL------VGVPRDSYYIGSKVGRYDKDTLK 326
           I+ +L  G    +T   Y    +E  +G +L       G+ R+  +I +KV   +++T+ 
Sbjct: 40  IEAALKSGYRQFDTANLY---KNETFLGNSLKKYLPQFGLTREDVFITTKVRTLNENTV- 95

Query: 327 MFDFSAEKTAAGLDNTLSLLGLDYVDLIQVH---DITFAPDTSVVL-----KETLPVLEQ 482
                 E+T   L N+L+ L  DYVDL+ +H   D     D    +     K     LE+
Sbjct: 96  ------EETEKQLANSLATLQTDYVDLLLIHYPRDRDTGNDDDYEINKSRRKIVWQTLEK 149

Query: 483 AVRDGKARFIGIADYDI 533
           A   G+ R IG+++Y++
Sbjct: 150 AKESGRVRSIGVSNYEV 166


>U55368-5|AAA97992.2|  333|Caenorhabditis elegans Hypothetical
           protein T08H10.1 protein.
          Length = 333

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 35/154 (22%), Positives = 67/154 (43%), Gaps = 19/154 (12%)
 Frame = +3

Query: 141 DEKRSLELIKESLNLGINYLETGPWYGQGSSEKVIGKALVGVPRDSYYIGSKVGRYDKDT 320
           DE      ++ +L+ G   ++T   Y    +E +IGK L       Y    K+ R D   
Sbjct: 26  DEAELTVALRAALDAGYRLIDTAHLY---QNEHIIGKVL-----HEYISSGKLKREDIFV 77

Query: 321 LKMFDFSA---EKTAAGLDNTLSLLGLDYVDLIQVH--------DITFAP--------DT 443
                F+A   E     +++ L  L L+Y+DL  +H        + +FAP         T
Sbjct: 78  TSKLPFTAHAPEDVPKCVESQLKALQLEYIDLYLIHCPFPFKHQEGSFAPLMENGELAVT 137

Query: 444 SVVLKETLPVLEQAVRDGKARFIGIADYDIDLMK 545
            +   +T   LE+  ++GK + +G++++  + ++
Sbjct: 138 EIAHIDTWRALEKLYKEGKLKALGVSNFSCNQLQ 171


>Z81088-2|CAB03127.1|  297|Caenorhabditis elegans Hypothetical
           protein F53F1.2 protein.
          Length = 297

 Score = 31.1 bits (67), Expect = 0.85
 Identities = 35/135 (25%), Positives = 57/135 (42%), Gaps = 12/135 (8%)
 Frame = +3

Query: 165 IKESLNLGINYLETGPWYGQGSSEKVIGKALV------GVPRDSYYIGSKVGRYDKDTLK 326
           I  +L  G    +T  +Y    +EK +G+AL       G+ R   ++ SK     K+   
Sbjct: 40  IDAALTAGYRMFDTAKYY---LNEKELGEALKILLPKHGLSRSDVFLTSKFFPESKNC-- 94

Query: 327 MFDFSAEKTAAGLDNTLSLLGLDYVDLIQVH------DITFAPDTSVVLKETLPVLEQAV 488
                 E     ++ +L  L  DY+D+  VH            + +   K    VLE+A 
Sbjct: 95  -----REACRGFVEESLQSLQTDYIDMYLVHYPKPNDSDNDDVNNAEYRKIAYEVLEEAK 149

Query: 489 RDGKARFIGIADYDI 533
             GK R IG+++Y+I
Sbjct: 150 AAGKVRSIGVSNYEI 164


>U21324-6|AAA62562.1|  287|Caenorhabditis elegans Hypothetical
           protein C35D10.6 protein.
          Length = 287

 Score = 31.1 bits (67), Expect = 0.85
 Identities = 28/133 (21%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
 Frame = +3

Query: 159 ELIKESLNLGINYLETGPWYG-QGSSEKVIGKALV--GVPRDSYYIGSKVGRYDKDTLKM 329
           ++I      G  +++T   Y  +    +++ K L   G+ R+  +I SK        L  
Sbjct: 29  QVIDAGFKEGYRFIDTAQVYNNEAKIGRILEKLLPANGLKREDIWITSK--------LAP 80

Query: 330 FDFSAEKTAAGLDNTLSLLGLDYVDLIQVHDITFA-----PDTSVVLKETLPVLEQAVRD 494
            +   +K    ++ +LS L ++Y+DL+ +H    +     P    +  E+  V+ + + +
Sbjct: 81  SNAGVKKARESIEESLSNLKVEYLDLLLIHWPGSSLKSENPANKKLRVESWNVMCEMMAE 140

Query: 495 GKARFIGIADYDI 533
           GK R +G+++++I
Sbjct: 141 GKLRSVGVSNFEI 153


>Z81088-3|CAB03128.1|  283|Caenorhabditis elegans Hypothetical
           protein F53F1.3 protein.
          Length = 283

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 8/134 (5%)
 Frame = +3

Query: 156 LELIKESLNLGINYLETGPWYGQGSSEKVIGKAL-VGVPRDSYYIGSKVGRYDKD-TLKM 329
           L ++  +L  G    +T   Y   ++EK IG AL + +P+ +      + R D   T KM
Sbjct: 27  LPVLDAALTAGYRLFDTAKVY---NNEKEIGDALEILLPKHN------LKREDIFITTKM 77

Query: 330 FDFSAEKTAAGLDNTLSLLGLDYVDLIQVH-DITFAPDTSVVLKETLPV-----LEQAVR 491
              + E     +D +LSLL   Y+D+  +H   +F       + +TL +     L +   
Sbjct: 78  HPNTVENVKKLVDESLSLLKTSYIDMYLIHYPKSFDYGDQDPMNKTLRIATWNDLWECKN 137

Query: 492 DGKARFIGIADYDI 533
            GK R +G++ ++I
Sbjct: 138 AGKIRSVGVSSFEI 151


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,788,612
Number of Sequences: 27780
Number of extensions: 307090
Number of successful extensions: 845
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 843
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)