Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19p18
         (602 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003302-1|AAO25062.1|  653|Drosophila melanogaster GH11071p pro...    85   5e-17
AE014134-784|AAN10338.1|  653|Drosophila melanogaster CG2950-PC,...    85   5e-17
AE014134-783|AAF50972.1|  653|Drosophila melanogaster CG2950-PB,...    85   5e-17
AE014134-782|AAF50973.1|  653|Drosophila melanogaster CG2950-PA,...    85   5e-17

>BT003302-1|AAO25062.1|  653|Drosophila melanogaster GH11071p
           protein.
          Length = 653

 Score = 85.4 bits (202), Expect = 5e-17
 Identities = 53/116 (45%), Positives = 70/116 (60%)
 Frame = +3

Query: 255 TKMTRTVKKLEVPRPLKSTTSSAHNRNSTLDVKINSVDDLIVLAEAVAYQMMQGNYDRAL 434
           T + R VK +E PRPLK T S +  +NS L      +++LI L + V   +   N     
Sbjct: 4   THLGRAVKNIEAPRPLK-TQSRSSLKNSYL-----VIEELIQLIDNVTVGLQSCN---TT 54

Query: 435 QSNVATMYSNLKLYGAQLEVLYKDFLDRYFVVFRNGSQDERLDKKTRLHLLELIEL 602
             ++  +  NL+++G QLE + KD LDR FVVFRN SQDERL+  TRL LLELIEL
Sbjct: 55  PESITLLLHNLRVHGPQLEAVSKDTLDRAFVVFRNASQDERLNITTRLKLLELIEL 110


>AE014134-784|AAN10338.1|  653|Drosophila melanogaster CG2950-PC,
           isoform C protein.
          Length = 653

 Score = 85.4 bits (202), Expect = 5e-17
 Identities = 53/116 (45%), Positives = 70/116 (60%)
 Frame = +3

Query: 255 TKMTRTVKKLEVPRPLKSTTSSAHNRNSTLDVKINSVDDLIVLAEAVAYQMMQGNYDRAL 434
           T + R VK +E PRPLK T S +  +NS L      +++LI L + V   +   N     
Sbjct: 4   THLGRAVKNIEAPRPLK-TQSRSSLKNSYL-----VIEELIQLIDNVTVGLQSCN---TT 54

Query: 435 QSNVATMYSNLKLYGAQLEVLYKDFLDRYFVVFRNGSQDERLDKKTRLHLLELIEL 602
             ++  +  NL+++G QLE + KD LDR FVVFRN SQDERL+  TRL LLELIEL
Sbjct: 55  PESITLLLHNLRVHGPQLEAVSKDTLDRAFVVFRNASQDERLNITTRLKLLELIEL 110


>AE014134-783|AAF50972.1|  653|Drosophila melanogaster CG2950-PB,
           isoform B protein.
          Length = 653

 Score = 85.4 bits (202), Expect = 5e-17
 Identities = 53/116 (45%), Positives = 70/116 (60%)
 Frame = +3

Query: 255 TKMTRTVKKLEVPRPLKSTTSSAHNRNSTLDVKINSVDDLIVLAEAVAYQMMQGNYDRAL 434
           T + R VK +E PRPLK T S +  +NS L      +++LI L + V   +   N     
Sbjct: 4   THLGRAVKNIEAPRPLK-TQSRSSLKNSYL-----VIEELIQLIDNVTVGLQSCN---TT 54

Query: 435 QSNVATMYSNLKLYGAQLEVLYKDFLDRYFVVFRNGSQDERLDKKTRLHLLELIEL 602
             ++  +  NL+++G QLE + KD LDR FVVFRN SQDERL+  TRL LLELIEL
Sbjct: 55  PESITLLLHNLRVHGPQLEAVSKDTLDRAFVVFRNASQDERLNITTRLKLLELIEL 110


>AE014134-782|AAF50973.1|  653|Drosophila melanogaster CG2950-PA,
           isoform A protein.
          Length = 653

 Score = 85.4 bits (202), Expect = 5e-17
 Identities = 53/116 (45%), Positives = 70/116 (60%)
 Frame = +3

Query: 255 TKMTRTVKKLEVPRPLKSTTSSAHNRNSTLDVKINSVDDLIVLAEAVAYQMMQGNYDRAL 434
           T + R VK +E PRPLK T S +  +NS L      +++LI L + V   +   N     
Sbjct: 4   THLGRAVKNIEAPRPLK-TQSRSSLKNSYL-----VIEELIQLIDNVTVGLQSCN---TT 54

Query: 435 QSNVATMYSNLKLYGAQLEVLYKDFLDRYFVVFRNGSQDERLDKKTRLHLLELIEL 602
             ++  +  NL+++G QLE + KD LDR FVVFRN SQDERL+  TRL LLELIEL
Sbjct: 55  PESITLLLHNLRVHGPQLEAVSKDTLDRAFVVFRNASQDERLNITTRLKLLELIEL 110


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,440,221
Number of Sequences: 53049
Number of extensions: 480601
Number of successful extensions: 1538
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1534
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2462276481
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)