Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19p13
         (559 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z95619-1|CAB09112.1|  156|Caenorhabditis elegans Hypothetical pr...   148   2e-36
AF101319-5|AAC69356.2|  530|Caenorhabditis elegans Hypothetical ...    29   3.0  
Z69718-2|CAA93536.1|  139|Caenorhabditis elegans Hypothetical pr...    28   5.2  
Z82259-5|CAB05125.2|  353|Caenorhabditis elegans Hypothetical pr...    27   9.1  
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr...    27   9.1  
AF038608-4|AAU05594.2|  310|Caenorhabditis elegans Serpentine re...    27   9.1  

>Z95619-1|CAB09112.1|  156|Caenorhabditis elegans Hypothetical
           protein H21P03.1 protein.
          Length = 156

 Score =  148 bits (359), Expect = 2e-36
 Identities = 64/133 (48%), Positives = 98/133 (73%)
 Frame = +3

Query: 108 SDWDTVTILRKKPPKASALKTEQAVNAARRQGIPVDTQQKYGAGTNKQHVTTKNTAKLDR 287
           +D ++VT++ K+ P    LK+   +NAA+R G+ + T++K  +G N+QH   KNT +LD 
Sbjct: 11  TDPNSVTMITKRGPVNKTLKSAAQLNAAQRAGVDISTEKKTMSGGNRQHSANKNTLRLDE 70

Query: 288 ETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGK 467
           ETEEL H+K+ L LGK++ Q R  KG +QKDL+T+I EKPQ+V +YE+G+ +PN  ++ K
Sbjct: 71  ETEELHHQKVALSLGKVMQQARATKGWTQKDLSTQINEKPQVVGEYESGKAVPNQQIMAK 130

Query: 468 IERAIGIKLRGKE 506
           +ERA+G+KLRGK+
Sbjct: 131 MERALGVKLRGKD 143


>AF101319-5|AAC69356.2|  530|Caenorhabditis elegans Hypothetical
           protein K08D9.6 protein.
          Length = 530

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 16/56 (28%), Positives = 21/56 (37%)
 Frame = -1

Query: 238 PAPYFCCVSTGIPCRRAAFTACSVFKAEAFGGFLRRIVTVSQSDMFNVDHWYDKTK 71
           P P   C+S      +       V  A  FGG L   +T      FN+   Y+K K
Sbjct: 185 PKPVIICISPQFVAEQWQIFMMQVHVAHRFGGHLHIYLTSIVESFFNLMREYEKRK 240


>Z69718-2|CAA93536.1|  139|Caenorhabditis elegans Hypothetical
           protein W06D11.3 protein.
          Length = 139

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 240 TNKQHVTTKNTAKLDRETEELRHEKIPLDLG 332
           ++KQH+ T+N   +D E E+   EKI  + G
Sbjct: 71  SSKQHMVTENIETVDAENEQQDGEKIASNTG 101


>Z82259-5|CAB05125.2|  353|Caenorhabditis elegans Hypothetical
           protein C28D4.5 protein.
          Length = 353

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = -3

Query: 494 KFYSNCPFNFSKNNV-IWNATTSFIIIYNLW 405
           K Y N  FNF +N++ IW    SF   Y+LW
Sbjct: 59  KVYGNQRFNFKRNDIDIWR--KSFKDSYSLW 87


>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
            F47A4.2 protein.
          Length = 3498

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = +3

Query: 195  RQGIPVDTQQKYGAGTNKQHVT-TKN 269
            +Q IP  +QQ+Y +G  + H T TKN
Sbjct: 2983 QQQIPAQSQQQYNSGRPQMHTTPTKN 3008


>AF038608-4|AAU05594.2|  310|Caenorhabditis elegans Serpentine
           receptor, class z protein37 protein.
          Length = 310

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
 Frame = -3

Query: 551 IPLFLSARRLQWLASFFSTKFYSNCPFNFSKNNVIWNATTSFIIIYNLWFFTNFSGEVFL 372
           IP+F+S R+L  L    S +F+S  P  +    + W +    ++++ + F   F   ++ 
Sbjct: 197 IPIFISVRKLSQLT---SAQFHS--PHIY----IFWQSIV--VVVFKIHFIKEFISYLYF 245

Query: 371 TH----SFSLSALHY 339
            +    SF +S LHY
Sbjct: 246 DYVYCFSFIISTLHY 260


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,960,749
Number of Sequences: 27780
Number of extensions: 230286
Number of successful extensions: 674
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 674
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)