Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte19p11
(660 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014134-1157|AAF52432.1| 992|Drosophila melanogaster CG11323-P... 60 2e-09
BT021443-1|AAX33591.1| 756|Drosophila melanogaster GH02545p pro... 33 0.45
AE014134-1156|AAF52431.1| 719|Drosophila melanogaster CG11201-P... 33 0.45
Y09430-1|CAA70581.1| 4151|Drosophila melanogaster Kakapo protein. 29 5.6
AF200425-1|AAF24343.1| 5201|Drosophila melanogaster Short stop/K... 29 5.6
AE013599-1792|AAF58320.2| 8805|Drosophila melanogaster CG18076-P... 29 5.6
AE013599-1791|AAM68562.1| 5160|Drosophila melanogaster CG18076-P... 29 5.6
AE013599-1790|AAF58319.3| 5501|Drosophila melanogaster CG18076-P... 29 5.6
AE013599-1789|AAM68561.1| 5201|Drosophila melanogaster CG18076-P... 29 5.6
AE013599-1788|AAG22268.2| 5390|Drosophila melanogaster CG18076-P... 29 5.6
AE013599-1787|AAF58317.1| 5385|Drosophila melanogaster CG18076-P... 29 5.6
AF298215-1|AAG30223.1| 2130|Drosophila melanogaster DNA polymera... 29 7.4
>AE014134-1157|AAF52432.1| 992|Drosophila melanogaster CG11323-PA
protein.
Length = 992
Score = 60.5 bits (140), Expect = 2e-09
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 12/95 (12%)
Frame = +1
Query: 370 KSWVSNERWNELKKIAETAMKQRKVFMIKGGGFPAIRRAMLERGWVEKYESHKVRHPP-- 543
++W++ ER NEL++ A+ A KQ K+F I+ G F ++R A+L RGWVEK + H+ P
Sbjct: 120 RTWITTERMNELRRKAQEAAKQNKIFTIR-GCFNSVRNALLMRGWVEKLDVHRKVMPAGQ 178
Query: 544 ------TNVDPKKASGKE----LSKVERMILYKFM 618
T PK+ +G+ + K ER I+ +F+
Sbjct: 179 MTYEDLTQRLPKRKAGETRRQYVQKCERNIMSRFL 213
>BT021443-1|AAX33591.1| 756|Drosophila melanogaster GH02545p
protein.
Length = 756
Score = 32.7 bits (71), Expect = 0.45
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +1
Query: 424 AMKQRKVFMIKGGGFPAIRRAMLERGWVEK 513
A + R++F + G + +RRA++ RGW+EK
Sbjct: 135 AYRNRRIFTVYGN-YHTVRRALMRRGWLEK 163
>AE014134-1156|AAF52431.1| 719|Drosophila melanogaster CG11201-PA
protein.
Length = 719
Score = 32.7 bits (71), Expect = 0.45
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +1
Query: 424 AMKQRKVFMIKGGGFPAIRRAMLERGWVEK 513
A + R++F + G + +RRA++ RGW+EK
Sbjct: 135 AYRNRRIFTVYGN-YHTVRRALMRRGWLEK 163
>Y09430-1|CAA70581.1| 4151|Drosophila melanogaster Kakapo protein.
Length = 4151
Score = 29.1 bits (62), Expect = 5.6
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +1
Query: 385 NERWNELKKIAETAMKQRKVFMIKGGGFPAIRRAMLERGWVEKYESHKVRHPPTNVDPK- 561
N+RWN+LK+ ++ V +++ G F + + W+ E P + D K
Sbjct: 1880 NDRWNDLKERMNERDRRLDVALLQSGKFQEALAGLSK--WLSDTEEMVANQKPPSSDYKV 1937
Query: 562 -KASGKELSKVERMIL 606
KA +E +++M+L
Sbjct: 1938 VKAQLQEQKFLKKMLL 1953
>AF200425-1|AAF24343.1| 5201|Drosophila melanogaster Short stop/Kakapo
long isoform protein.
Length = 5201
Score = 29.1 bits (62), Expect = 5.6
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +1
Query: 385 NERWNELKKIAETAMKQRKVFMIKGGGFPAIRRAMLERGWVEKYESHKVRHPPTNVDPK- 561
N+RWN+LK+ ++ V +++ G F + + W+ E P + D K
Sbjct: 2926 NDRWNDLKERMNERDRRLDVALLQSGKFQEALAGLSK--WLSDTEEMVANQKPPSSDYKV 2983
Query: 562 -KASGKELSKVERMIL 606
KA +E +++M+L
Sbjct: 2984 VKAQLQEQKFLKKMLL 2999
>AE013599-1792|AAF58320.2| 8805|Drosophila melanogaster CG18076-PH,
isoform H protein.
Length = 8805
Score = 29.1 bits (62), Expect = 5.6
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +1
Query: 385 NERWNELKKIAETAMKQRKVFMIKGGGFPAIRRAMLERGWVEKYESHKVRHPPTNVDPK- 561
N+RWN+LK+ ++ V +++ G F + + W+ E P + D K
Sbjct: 6530 NDRWNDLKERMNERDRRLDVALLQSGKFQEALAGLSK--WLSDTEEMVANQKPPSSDYKV 6587
Query: 562 -KASGKELSKVERMIL 606
KA +E +++M+L
Sbjct: 6588 VKAQLQEQKFLKKMLL 6603
>AE013599-1791|AAM68562.1| 5160|Drosophila melanogaster CG18076-PC,
isoform C protein.
Length = 5160
Score = 29.1 bits (62), Expect = 5.6
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +1
Query: 385 NERWNELKKIAETAMKQRKVFMIKGGGFPAIRRAMLERGWVEKYESHKVRHPPTNVDPK- 561
N+RWN+LK+ ++ V +++ G F + + W+ E P + D K
Sbjct: 2885 NDRWNDLKERMNERDRRLDVALLQSGKFQEALAGLSK--WLSDTEEMVANQKPPSSDYKV 2942
Query: 562 -KASGKELSKVERMIL 606
KA +E +++M+L
Sbjct: 2943 VKAQLQEQKFLKKMLL 2958
>AE013599-1790|AAF58319.3| 5501|Drosophila melanogaster CG18076-PA,
isoform A protein.
Length = 5501
Score = 29.1 bits (62), Expect = 5.6
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +1
Query: 385 NERWNELKKIAETAMKQRKVFMIKGGGFPAIRRAMLERGWVEKYESHKVRHPPTNVDPK- 561
N+RWN+LK+ ++ V +++ G F + + W+ E P + D K
Sbjct: 3226 NDRWNDLKERMNERDRRLDVALLQSGKFQEALAGLSK--WLSDTEEMVANQKPPSSDYKV 3283
Query: 562 -KASGKELSKVERMIL 606
KA +E +++M+L
Sbjct: 3284 VKAQLQEQKFLKKMLL 3299
>AE013599-1789|AAM68561.1| 5201|Drosophila melanogaster CG18076-PE,
isoform E protein.
Length = 5201
Score = 29.1 bits (62), Expect = 5.6
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +1
Query: 385 NERWNELKKIAETAMKQRKVFMIKGGGFPAIRRAMLERGWVEKYESHKVRHPPTNVDPK- 561
N+RWN+LK+ ++ V +++ G F + + W+ E P + D K
Sbjct: 2926 NDRWNDLKERMNERDRRLDVALLQSGKFQEALAGLSK--WLSDTEEMVANQKPPSSDYKV 2983
Query: 562 -KASGKELSKVERMIL 606
KA +E +++M+L
Sbjct: 2984 VKAQLQEQKFLKKMLL 2999
>AE013599-1788|AAG22268.2| 5390|Drosophila melanogaster CG18076-PB,
isoform B protein.
Length = 5390
Score = 29.1 bits (62), Expect = 5.6
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +1
Query: 385 NERWNELKKIAETAMKQRKVFMIKGGGFPAIRRAMLERGWVEKYESHKVRHPPTNVDPK- 561
N+RWN+LK+ ++ V +++ G F + + W+ E P + D K
Sbjct: 3115 NDRWNDLKERMNERDRRLDVALLQSGKFQEALAGLSK--WLSDTEEMVANQKPPSSDYKV 3172
Query: 562 -KASGKELSKVERMIL 606
KA +E +++M+L
Sbjct: 3173 VKAQLQEQKFLKKMLL 3188
>AE013599-1787|AAF58317.1| 5385|Drosophila melanogaster CG18076-PG,
isoform G protein.
Length = 5385
Score = 29.1 bits (62), Expect = 5.6
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +1
Query: 385 NERWNELKKIAETAMKQRKVFMIKGGGFPAIRRAMLERGWVEKYESHKVRHPPTNVDPK- 561
N+RWN+LK+ ++ V +++ G F + + W+ E P + D K
Sbjct: 3115 NDRWNDLKERMNERDRRLDVALLQSGKFQEALAGLSK--WLSDTEEMVANQKPPSSDYKV 3172
Query: 562 -KASGKELSKVERMIL 606
KA +E +++M+L
Sbjct: 3173 VKAQLQEQKFLKKMLL 3188
>AF298215-1|AAG30223.1| 2130|Drosophila melanogaster DNA polymerase
zeta catalyticsubunit protein.
Length = 2130
Score = 28.7 bits (61), Expect = 7.4
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +1
Query: 235 KVYQTPSSTK-RVRLKKDLRPSSAISF-SKSDHGPETTSSTEQ 357
K TP+S+K R R K L+P + +SF D P ++ S+EQ
Sbjct: 1193 KCKATPTSSKARERGKSRLKPGTRLSFIGSQDEEPPSSQSSEQ 1235
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,681,995
Number of Sequences: 53049
Number of extensions: 538028
Number of successful extensions: 1237
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1236
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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