Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19o17
         (440 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-2855|AAF57579.1|  655|Drosophila melanogaster CG7461-PA...    56   3e-08
AY051494-1|AAK92918.1|  818|Drosophila melanogaster GH14774p pro...    30   1.6  
AF313621-1|AAL78208.1|  818|Drosophila melanogaster CTCF protein.      30   1.6  
AE014296-1240|AAF50573.2|  818|Drosophila melanogaster CG8591-PA...    30   1.6  

>AE013599-2855|AAF57579.1|  655|Drosophila melanogaster CG7461-PA
           protein.
          Length = 655

 Score = 55.6 bits (128), Expect = 3e-08
 Identities = 22/63 (34%), Positives = 39/63 (61%)
 Frame = +2

Query: 251 ASEAQARNGPRQSASFTLNLFRGRFEPTQVFPFPEPLSDDQRQMLQELVPPVEKFFQEXN 430
           A   +++    ++ SF  N+FRG    +QVFP+P+ L+ +Q+++   L+ P E+FF + N
Sbjct: 59  AESNRSKEKASENESFMANIFRGSLVSSQVFPYPDVLTAEQKELTNSLIDPFERFFSDVN 118

Query: 431 DPA 439
           D A
Sbjct: 119 DAA 121


>AY051494-1|AAK92918.1|  818|Drosophila melanogaster GH14774p
           protein.
          Length = 818

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
 Frame = +2

Query: 203 PKTTAVVPLCSGARSAASEA-QARNGPRQSASFTLNLFRGRFEPTQVFPFPEPLSDDQRQ 379
           PK  +V P    AR+AA++A Q+   P  +    +   RGR     V P PEP+  D  +
Sbjct: 152 PKAISVRP----ARAAAAKAKQSAMPPPPALVVKVPAPRGRPRKNPVIPKPEPM--DLER 205

Query: 380 MLQELV--PPVEKFFQEXND 433
            L+ELV  P +     E +D
Sbjct: 206 ELEELVDEPDISSMVTELSD 225


>AF313621-1|AAL78208.1|  818|Drosophila melanogaster CTCF protein.
          Length = 818

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
 Frame = +2

Query: 203 PKTTAVVPLCSGARSAASEA-QARNGPRQSASFTLNLFRGRFEPTQVFPFPEPLSDDQRQ 379
           PK  +V P    AR+AA++A Q+   P  +    +   RGR     V P PEP+  D  +
Sbjct: 152 PKAISVRP----ARAAAAKAKQSAMPPPPALVVKVPAPRGRPRKNPVIPKPEPM--DLER 205

Query: 380 MLQELV--PPVEKFFQEXND 433
            L+ELV  P +     E +D
Sbjct: 206 ELEELVDEPDISSMVTELSD 225


>AE014296-1240|AAF50573.2|  818|Drosophila melanogaster CG8591-PA
           protein.
          Length = 818

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
 Frame = +2

Query: 203 PKTTAVVPLCSGARSAASEA-QARNGPRQSASFTLNLFRGRFEPTQVFPFPEPLSDDQRQ 379
           PK  +V P    AR+AA++A Q+   P  +    +   RGR     V P PEP+  D  +
Sbjct: 152 PKAISVRP----ARAAAAKAKQSAMPPPPALVVKVPAPRGRPRKNPVIPKPEPM--DLER 205

Query: 380 MLQELV--PPVEKFFQEXND 433
            L+ELV  P +     E +D
Sbjct: 206 ELEELVDEPDISSMVTELSD 225


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,506,696
Number of Sequences: 53049
Number of extensions: 405193
Number of successful extensions: 1183
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1183
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1417837128
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)