Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte19o15
(569 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X79805-1|CAA56200.1| 127|Homo sapiens PC4, p15 protein. 62 1e-09
U12979-1|AAA20980.1| 127|Homo sapiens PC4 protein. 62 1e-09
CR456902-1|CAG33183.1| 127|Homo sapiens PC4 protein. 62 1e-09
BC105972-1|AAI05973.1| 127|Homo sapiens SUB1 homolog (S. cerevi... 62 1e-09
BC022339-1|AAH22339.1| 127|Homo sapiens SUB1 homolog (S. cerevi... 62 1e-09
BC018189-1|AAH18189.1| 127|Homo sapiens SUB1 homolog (S. cerevi... 62 1e-09
BC010537-1|AAH10537.1| 127|Homo sapiens SUB1 homolog (S. cerevi... 62 1e-09
BC009610-1|AAH09610.1| 127|Homo sapiens SUB1 homolog (S. cerevi... 62 1e-09
AB209285-1|BAD92522.1| 134|Homo sapiens activated RNA polymeras... 62 1e-09
AY584192-1|AAT72821.1| 73|Homo sapiens activated RNA polymeras... 58 3e-08
>X79805-1|CAA56200.1| 127|Homo sapiens PC4, p15 protein.
Length = 127
Score = 62.5 bits (145), Expect = 1e-09
Identities = 31/93 (33%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Frame = +1
Query: 262 QPIKISRNPPAEKKAKMADRTNDKEPTWVLQ-GK-KLLKVREFKGKVYVDIREFY-EKNG 432
+P+K + + + +++ + Q GK + + VR+FKGKV +DIRE++ + G
Sbjct: 35 KPVKKQKTGETSRALSSSKQSSSSRDDNMFQIGKMRYVSVRDFKGKVLIDIREYWMDPEG 94
Query: 433 ELLPGKKGISLTPEQWRKLLSVGEEVNETVSSM 531
E+ PG+KGISL PEQW +L ++++ V +
Sbjct: 95 EMKPGRKGISLNPEQWSQLKEQISDIDDAVRKL 127
>U12979-1|AAA20980.1| 127|Homo sapiens PC4 protein.
Length = 127
Score = 62.5 bits (145), Expect = 1e-09
Identities = 31/93 (33%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Frame = +1
Query: 262 QPIKISRNPPAEKKAKMADRTNDKEPTWVLQ-GK-KLLKVREFKGKVYVDIREFY-EKNG 432
+P+K + + + +++ + Q GK + + VR+FKGKV +DIRE++ + G
Sbjct: 35 KPVKKQKTGETSRALSSSKQSSSSRDDNMFQIGKMRYVSVRDFKGKVLIDIREYWMDPEG 94
Query: 433 ELLPGKKGISLTPEQWRKLLSVGEEVNETVSSM 531
E+ PG+KGISL PEQW +L ++++ V +
Sbjct: 95 EMKPGRKGISLNPEQWSQLKEQISDIDDAVRKL 127
>CR456902-1|CAG33183.1| 127|Homo sapiens PC4 protein.
Length = 127
Score = 62.5 bits (145), Expect = 1e-09
Identities = 31/93 (33%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Frame = +1
Query: 262 QPIKISRNPPAEKKAKMADRTNDKEPTWVLQ-GK-KLLKVREFKGKVYVDIREFY-EKNG 432
+P+K + + + +++ + Q GK + + VR+FKGKV +DIRE++ + G
Sbjct: 35 KPVKKQKTGETSRALSSSKQSSSSRDDNMFQIGKMRYVSVRDFKGKVLIDIREYWMDPEG 94
Query: 433 ELLPGKKGISLTPEQWRKLLSVGEEVNETVSSM 531
E+ PG+KGISL PEQW +L ++++ V +
Sbjct: 95 EMKPGRKGISLNPEQWSQLKEQISDIDDAVRKL 127
>BC105972-1|AAI05973.1| 127|Homo sapiens SUB1 homolog (S.
cerevisiae) protein.
Length = 127
Score = 62.5 bits (145), Expect = 1e-09
Identities = 31/93 (33%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Frame = +1
Query: 262 QPIKISRNPPAEKKAKMADRTNDKEPTWVLQ-GK-KLLKVREFKGKVYVDIREFY-EKNG 432
+P+K + + + +++ + Q GK + + VR+FKGKV +DIRE++ + G
Sbjct: 35 KPVKKQKTGETSRALSSSKQSSSSRDDNMFQIGKMRYVSVRDFKGKVLIDIREYWMDPEG 94
Query: 433 ELLPGKKGISLTPEQWRKLLSVGEEVNETVSSM 531
E+ PG+KGISL PEQW +L ++++ V +
Sbjct: 95 EMKPGRKGISLNPEQWSQLKEQISDIDDAVRKL 127
>BC022339-1|AAH22339.1| 127|Homo sapiens SUB1 homolog (S.
cerevisiae) protein.
Length = 127
Score = 62.5 bits (145), Expect = 1e-09
Identities = 31/93 (33%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Frame = +1
Query: 262 QPIKISRNPPAEKKAKMADRTNDKEPTWVLQ-GK-KLLKVREFKGKVYVDIREFY-EKNG 432
+P+K + + + +++ + Q GK + + VR+FKGKV +DIRE++ + G
Sbjct: 35 KPVKKQKTGETSRALSSSKQSSSSRDDNMFQIGKMRYVSVRDFKGKVLIDIREYWMDPEG 94
Query: 433 ELLPGKKGISLTPEQWRKLLSVGEEVNETVSSM 531
E+ PG+KGISL PEQW +L ++++ V +
Sbjct: 95 EMKPGRKGISLNPEQWSQLKEQISDIDDAVRKL 127
>BC018189-1|AAH18189.1| 127|Homo sapiens SUB1 homolog (S.
cerevisiae) protein.
Length = 127
Score = 62.5 bits (145), Expect = 1e-09
Identities = 31/93 (33%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Frame = +1
Query: 262 QPIKISRNPPAEKKAKMADRTNDKEPTWVLQ-GK-KLLKVREFKGKVYVDIREFY-EKNG 432
+P+K + + + +++ + Q GK + + VR+FKGKV +DIRE++ + G
Sbjct: 35 KPVKKQKTGETSRALSSSKQSSSSRDDNMFQIGKMRYVSVRDFKGKVLIDIREYWMDPEG 94
Query: 433 ELLPGKKGISLTPEQWRKLLSVGEEVNETVSSM 531
E+ PG+KGISL PEQW +L ++++ V +
Sbjct: 95 EMKPGRKGISLNPEQWSQLKEQISDIDDAVRKL 127
>BC010537-1|AAH10537.1| 127|Homo sapiens SUB1 homolog (S.
cerevisiae) protein.
Length = 127
Score = 62.5 bits (145), Expect = 1e-09
Identities = 31/93 (33%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Frame = +1
Query: 262 QPIKISRNPPAEKKAKMADRTNDKEPTWVLQ-GK-KLLKVREFKGKVYVDIREFY-EKNG 432
+P+K + + + +++ + Q GK + + VR+FKGKV +DIRE++ + G
Sbjct: 35 KPVKKQKTGETSRALSSSKQSSSSRDDNMFQIGKMRYVSVRDFKGKVLIDIREYWMDPEG 94
Query: 433 ELLPGKKGISLTPEQWRKLLSVGEEVNETVSSM 531
E+ PG+KGISL PEQW +L ++++ V +
Sbjct: 95 EMKPGRKGISLNPEQWSQLKEQISDIDDAVRKL 127
>BC009610-1|AAH09610.1| 127|Homo sapiens SUB1 homolog (S.
cerevisiae) protein.
Length = 127
Score = 62.5 bits (145), Expect = 1e-09
Identities = 31/93 (33%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Frame = +1
Query: 262 QPIKISRNPPAEKKAKMADRTNDKEPTWVLQ-GK-KLLKVREFKGKVYVDIREFY-EKNG 432
+P+K + + + +++ + Q GK + + VR+FKGKV +DIRE++ + G
Sbjct: 35 KPVKKQKTGETSRALSSSKQSSSSRDDNMFQIGKMRYVSVRDFKGKVLIDIREYWMDPEG 94
Query: 433 ELLPGKKGISLTPEQWRKLLSVGEEVNETVSSM 531
E+ PG+KGISL PEQW +L ++++ V +
Sbjct: 95 EMKPGRKGISLNPEQWSQLKEQISDIDDAVRKL 127
>AB209285-1|BAD92522.1| 134|Homo sapiens activated RNA polymerase
II transcription cofactor 4 variant protein.
Length = 134
Score = 62.5 bits (145), Expect = 1e-09
Identities = 31/93 (33%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Frame = +1
Query: 262 QPIKISRNPPAEKKAKMADRTNDKEPTWVLQ-GK-KLLKVREFKGKVYVDIREFY-EKNG 432
+P+K + + + +++ + Q GK + + VR+FKGKV +DIRE++ + G
Sbjct: 42 KPVKKQKTGETSRALSSSKQSSSSRDDNMFQIGKMRYVSVRDFKGKVLIDIREYWMDPEG 101
Query: 433 ELLPGKKGISLTPEQWRKLLSVGEEVNETVSSM 531
E+ PG+KGISL PEQW +L ++++ V +
Sbjct: 102 EMKPGRKGISLNPEQWSQLKEQISDIDDAVRKL 134
>AY584192-1|AAT72821.1| 73|Homo sapiens activated RNA polymerase
II transcription cofactor 4 protein.
Length = 73
Score = 57.6 bits (133), Expect = 3e-08
Identities = 24/58 (41%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = +1
Query: 361 KLLKVREFKGKVYVDIREFY-EKNGELLPGKKGISLTPEQWRKLLSVGEEVNETVSSM 531
+ + VR+FKGK+ +DIRE++ + GE+ PG+KGISL EQW +L ++++ V +
Sbjct: 16 RYVSVRDFKGKILIDIREYWMDSEGEMKPGRKGISLNMEQWSQLKEQISDIDDAVRKL 73
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,905,216
Number of Sequences: 237096
Number of extensions: 1283521
Number of successful extensions: 9960
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 9900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9950
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5816287018
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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