Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19o13
         (627 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0076 + 22558105-22558261,22558356-22558405,22559837-225600...    30   1.7  
02_04_0055 - 19290975-19292312                                         30   1.7  
07_03_1020 + 23344657-23346969                                         29   2.3  
07_03_0008 + 12303536-12303893,12303910-12304176,12304635-123049...    28   5.3  
03_01_0397 + 3086142-3086489,3087097-3087252,3088043-3088201,308...    28   7.0  
12_02_1110 + 26154024-26154314,26154400-26154944,26155023-261551...    27   9.2  
07_01_1118 - 10316298-10316710,10316789-10317264,10317397-103177...    27   9.2  

>04_04_0076 +
           22558105-22558261,22558356-22558405,22559837-22560044,
           22560112-22560237,22560469-22560567,22560729-22561405,
           22561483-22561731,22561808-22561936,22562021-22562089,
           22562183-22562256,22563086-22563098,22563361-22563468,
           22563541-22563651,22563725-22563811,22564043-22564068,
           22564840-22564906,22565123-22565212,22565295-22565387,
           22565515-22565604,22565699-22565761,22566349-22566447
          Length = 894

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +3

Query: 57  NEKAKEDYIISIYRKLISEKCVEQRMLSSKQQYVGFKCSSASL*RSY 197
           N KA E++   ++   I  +C EQ ++S KQ+ +  K     + +SY
Sbjct: 153 NSKAFEEFNCLLHDSSIKLECAEQMIISGKQEMLRIKQEKEEMDQSY 199


>02_04_0055 - 19290975-19292312
          Length = 445

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
 Frame = -3

Query: 550 FLCLVSRTFRDITWRRHEPRVS*GPSFNVADTV*HLVQHASRSEDDEENNNGHCGHK-AV 374
           FL  +S  F D T RR E +    P  N    + HL        DD+++++    H+  +
Sbjct: 283 FLERISNGFGDCTLRRVESQRE--PKPNKMRALGHLGGGGGGGADDDDDDDDVYQHQHRI 340

Query: 373 AGASFIHGTGPAPS 332
             A F  G GP PS
Sbjct: 341 KCAGFFGGMGPTPS 354


>07_03_1020 + 23344657-23346969
          Length = 770

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = +2

Query: 482 LAHTRFVPTPGDITECSRNQTEETETIHGIMSTSEMTHGTKQHAYDS 622
           LAH+ F+P P + TE   +Q   T  +H           T +H Y S
Sbjct: 21  LAHSAFIPKPKNRTEHKPDQLSNTYIVHANHLLKPSRFATLEHWYIS 67


>07_03_0008 +
           12303536-12303893,12303910-12304176,12304635-12304951,
           12304975-12305819,12305859-12306069
          Length = 665

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +2

Query: 425 ATGVLDKMLYSIGYVKARALAHTRFVPT 508
           AT +++KM+ +IG+ K R L H R + T
Sbjct: 17  ATNLIEKMISNIGWSKERLLTHQRGMHT 44


>03_01_0397 +
           3086142-3086489,3087097-3087252,3088043-3088201,
           3088305-3088388,3089266-3089348,3089486-3089531,
           3089825-3089912,3090009-3090178,3090317-3090430,
           3090497-3090604,3090987-3091202
          Length = 523

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -1

Query: 324 KHFSLAVRRKTTHIGISDIIWSMNEMKLYDVCN 226
           +HF    +RK  H    DI+W   +  +Y VCN
Sbjct: 212 EHFKDPTKRKVMHGADRDIMWLQRDFHIY-VCN 243


>12_02_1110 +
           26154024-26154314,26154400-26154944,26155023-26155109,
           26155237-26155293,26155369-26155607,26155715-26155833,
           26155945-26156031,26156117-26156194
          Length = 500

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = -3

Query: 607 LFCPMRHFTSGHNTMNSLGFLCLVSRTFRD-ITW 509
           LFCPM+ F    N +N + ++ +    F   I+W
Sbjct: 178 LFCPMQRFLQAQNIVNPVAYITMAVLIFHILISW 211


>07_01_1118 -
           10316298-10316710,10316789-10317264,10317397-10317735,
           10317798-10317895,10319007-10319045
          Length = 454

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = +3

Query: 87  SIYRKLISEKCVEQRMLSSKQQYVGFKCSSASL*RSY 197
           +I  +L+  KC  + +++++ ++V   CSSASL   Y
Sbjct: 62  AILSRLLDNKCSGRIIVTTRIEHVARACSSASLEEDY 98


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,607,977
Number of Sequences: 37544
Number of extensions: 330785
Number of successful extensions: 686
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 686
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1525730988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)