Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte19o11
(628 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118368-1|AAM48397.1| 478|Drosophila melanogaster RE11562p pro... 170 2e-42
AE013599-97|AAF57318.2| 478|Drosophila melanogaster CG17337-PA ... 170 2e-42
AY113542-1|AAM29547.1| 400|Drosophila melanogaster RE61589p pro... 40 0.003
AE014297-3271|AAF56096.1| 400|Drosophila melanogaster CG17109-P... 40 0.003
BT010251-1|AAQ23569.1| 512|Drosophila melanogaster RE38958p pro... 29 6.8
AE013599-2472|AAF57860.2| 512|Drosophila melanogaster CG14478-P... 29 6.8
AE013599-2471|AAF57859.1| 512|Drosophila melanogaster CG14478-P... 29 6.8
>AY118368-1|AAM48397.1| 478|Drosophila melanogaster RE11562p
protein.
Length = 478
Score = 170 bits (413), Expect = 2e-42
Identities = 83/163 (50%), Positives = 104/163 (63%), Gaps = 1/163 (0%)
Frame = +2
Query: 143 LPEIFKYVDQNKDSYKQLLKEAVAIPSVSCDVKYRADCIRMVHWMQDKLKEVGATTELRD 322
L + F +VD K+ Y LK V I SVS + R + RMV W D+L+ +GA TEL D
Sbjct: 8 LQKFFAFVDGKKEDYIGALKTVVGIQSVSAWPEKRGEIGRMVEWTADRLRSLGAETELAD 67
Query: 323 VGFQTI-DGKDVQXXXXXXXXXXNDPKKNTVCIYGHLDVQPALKSDGWETEPFELVERNE 499
VG QT+ +G+ + DP K TV +YGHLDVQPALK DGW T PFEL E +
Sbjct: 68 VGQQTLPNGQIIPLPKVLLGTLGKDPSKKTVLVYGHLDVQPALKEDGWNTNPFELTEVDG 127
Query: 500 KLYGRGSTDDKGPVLGWLHTINAYKGTGAELPVNLKFIFECME 628
KL+GRG++DDKGPVL W+H I AY+ LPVN+KF+FE ME
Sbjct: 128 KLFGRGASDDKGPVLCWIHAIEAYQKLNIALPVNVKFVFEGME 170
>AE013599-97|AAF57318.2| 478|Drosophila melanogaster CG17337-PA
protein.
Length = 478
Score = 170 bits (413), Expect = 2e-42
Identities = 83/163 (50%), Positives = 104/163 (63%), Gaps = 1/163 (0%)
Frame = +2
Query: 143 LPEIFKYVDQNKDSYKQLLKEAVAIPSVSCDVKYRADCIRMVHWMQDKLKEVGATTELRD 322
L + F +VD K+ Y LK V I SVS + R + RMV W D+L+ +GA TEL D
Sbjct: 8 LQKFFAFVDGKKEDYIGALKTVVGIQSVSAWPEKRGEIGRMVEWTADRLRSLGAETELAD 67
Query: 323 VGFQTI-DGKDVQXXXXXXXXXXNDPKKNTVCIYGHLDVQPALKSDGWETEPFELVERNE 499
VG QT+ +G+ + DP K TV +YGHLDVQPALK DGW T PFEL E +
Sbjct: 68 VGQQTLPNGQIIPLPKVLLGTLGKDPSKKTVLVYGHLDVQPALKEDGWNTNPFELTEVDG 127
Query: 500 KLYGRGSTDDKGPVLGWLHTINAYKGTGAELPVNLKFIFECME 628
KL+GRG++DDKGPVL W+H I AY+ LPVN+KF+FE ME
Sbjct: 128 KLFGRGASDDKGPVLCWIHAIEAYQKLNIALPVNVKFVFEGME 170
>AY113542-1|AAM29547.1| 400|Drosophila melanogaster RE61589p
protein.
Length = 400
Score = 39.9 bits (89), Expect = 0.003
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +2
Query: 392 DPKKNTVCIYGHLDVQPALKSDGWETEPFEL-VERNEKLYGRGSTDDKGPVLGWLHTINA 568
+P+ +V + H+DV P + D W +PF ++ +++ RG+ D K G+L I
Sbjct: 68 EPELPSVILNSHMDVVPVFR-DKWTHDPFAADIDEEGRIFARGTQDMKSVGTGYLGAIRL 126
Query: 569 YKGTGAE 589
K +G +
Sbjct: 127 LKASGVQ 133
>AE014297-3271|AAF56096.1| 400|Drosophila melanogaster CG17109-PA
protein.
Length = 400
Score = 39.9 bits (89), Expect = 0.003
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +2
Query: 392 DPKKNTVCIYGHLDVQPALKSDGWETEPFEL-VERNEKLYGRGSTDDKGPVLGWLHTINA 568
+P+ +V + H+DV P + D W +PF ++ +++ RG+ D K G+L I
Sbjct: 68 EPELPSVILNSHMDVVPVFR-DKWTHDPFAADIDEEGRIFARGTQDMKSVGTGYLGAIRL 126
Query: 569 YKGTGAE 589
K +G +
Sbjct: 127 LKASGVQ 133
>BT010251-1|AAQ23569.1| 512|Drosophila melanogaster RE38958p
protein.
Length = 512
Score = 28.7 bits (61), Expect = 6.8
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = -2
Query: 567 ALMVCSQPSTGPLSSVEPLPYNFSLRSTSSKGSVSHPSDFNAGCTSK 427
AL+ S ST P SS + S S+SS S S + +A C K
Sbjct: 244 ALLRASAASTAPSSSASSSSSSSSASSSSSSSSSSSSASSSANCAKK 290
>AE013599-2472|AAF57860.2| 512|Drosophila melanogaster CG14478-PB,
isoform B protein.
Length = 512
Score = 28.7 bits (61), Expect = 6.8
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = -2
Query: 567 ALMVCSQPSTGPLSSVEPLPYNFSLRSTSSKGSVSHPSDFNAGCTSK 427
AL+ S ST P SS + S S+SS S S + +A C K
Sbjct: 244 ALLRASAASTAPSSSASSSSSSSSASSSSSSSSSSSSASSSANCAKK 290
>AE013599-2471|AAF57859.1| 512|Drosophila melanogaster CG14478-PA,
isoform A protein.
Length = 512
Score = 28.7 bits (61), Expect = 6.8
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = -2
Query: 567 ALMVCSQPSTGPLSSVEPLPYNFSLRSTSSKGSVSHPSDFNAGCTSK 427
AL+ S ST P SS + S S+SS S S + +A C K
Sbjct: 244 ALLRASAASTAPSSSASSSSSSSSASSSSSSSSSSSSASSSANCAKK 290
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,066,811
Number of Sequences: 53049
Number of extensions: 608300
Number of successful extensions: 1571
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1569
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2600432100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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