Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19o08
         (528 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113210-1|AAM29215.1|  872|Drosophila melanogaster AT06220p pro...    29   3.9  
AE014296-2188|AAF49882.2|  271|Drosophila melanogaster CG17666-P...    29   3.9  
AE014296-2187|AAN11857.1|  872|Drosophila melanogaster CG17666-P...    29   3.9  
AE014297-583|AAF54045.3| 1114|Drosophila melanogaster CG14608-PA...    29   5.2  

>AY113210-1|AAM29215.1|  872|Drosophila melanogaster AT06220p
           protein.
          Length = 872

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3

Query: 183 HCCCYCWNPCAKPACCSN 236
           +CC YC +PC    CCSN
Sbjct: 752 NCCNYCCSPCG--CCCSN 767


>AE014296-2188|AAF49882.2|  271|Drosophila melanogaster CG17666-PB,
           isoform B protein.
          Length = 271

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3

Query: 183 HCCCYCWNPCAKPACCSN 236
           +CC YC +PC    CCSN
Sbjct: 151 NCCNYCCSPCG--CCCSN 166


>AE014296-2187|AAN11857.1|  872|Drosophila melanogaster CG17666-PA,
           isoform A protein.
          Length = 872

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3

Query: 183 HCCCYCWNPCAKPACCSN 236
           +CC YC +PC    CCSN
Sbjct: 752 NCCNYCCSPCG--CCCSN 767


>AE014297-583|AAF54045.3| 1114|Drosophila melanogaster CG14608-PA
            protein.
          Length = 1114

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = +1

Query: 88   RLSIILNRIPVIKFRKGGAS 147
            RL+   NRIPV  FR+GGA+
Sbjct: 1016 RLTTTTNRIPVTTFRRGGAA 1035


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,657,602
Number of Sequences: 53049
Number of extensions: 308117
Number of successful extensions: 951
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1970722560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)