Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19o08
         (528 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75952-5|CAB00093.2|  149|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z49886-6|CAI79131.1|  149|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z49886-5|CAA90055.1|  152|Caenorhabditis elegans Hypothetical pr...    29   2.1  
U00065-1|AAK68287.1|  400|Caenorhabditis elegans Hypothetical pr...    28   3.6  
Z75956-4|CAN99718.1|  252|Caenorhabditis elegans Hypothetical pr...    28   4.8  
Z75956-3|CAJ90494.1|  217|Caenorhabditis elegans Hypothetical pr...    28   4.8  
Z75956-2|CAJ90493.2|  384|Caenorhabditis elegans Hypothetical pr...    28   4.8  
Z75956-1|CAB00128.2|  489|Caenorhabditis elegans Hypothetical pr...    28   4.8  

>Z75952-5|CAB00093.2|  149|Caenorhabditis elegans Hypothetical
           protein F29D10.2 protein.
          Length = 149

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = +3

Query: 150 CRYKLSRSFRTHCCCYCWNPCAKPACCS 233
           CR +     R  CCC C   C    CC+
Sbjct: 69  CRPRCCCCCRPKCCCTCCRTCCCTRCCT 96


>Z49886-6|CAI79131.1|  149|Caenorhabditis elegans Hypothetical
           protein C06A1.7 protein.
          Length = 149

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = +3

Query: 150 CRYKLSRSFRTHCCCYCWNPCAKPACCS 233
           CR +     R  CCC C   C    CC+
Sbjct: 71  CRPRCCCCCRPKCCCTCCRTCCCTRCCT 98


>Z49886-5|CAA90055.1|  152|Caenorhabditis elegans Hypothetical
           protein C06A1.6 protein.
          Length = 152

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = +3

Query: 150 CRYKLSRSFRTHCCCYCWNPCAKPACCS 233
           CR +     R  CCC C   C    CC+
Sbjct: 74  CRPRCCCCCRPKCCCTCCRTCCCTRCCT 101


>U00065-1|AAK68287.1|  400|Caenorhabditis elegans Hypothetical
           protein D1044.7 protein.
          Length = 400

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +3

Query: 114 SCYKIS*RWG*SCRYKLSRSFRTHCCCYCWN 206
           SC+ +S R+G  C Y  S ++  + CC+  N
Sbjct: 45  SCFSVSARYGAICHY--SSNYNNYLCCHSQN 73


>Z75956-4|CAN99718.1|  252|Caenorhabditis elegans Hypothetical
           protein R31.2d protein.
          Length = 252

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
 Frame = +1

Query: 217 SQPAAAMSTGAIPDIDLPARYKRQ-PL---SEEEIAYINGGGIV*CPSYSATIIENLSQS 384
           + PA A    AIP I      ++  P    SE E +++        PS  AT++E   Q 
Sbjct: 148 TSPAVAGIAAAIPIISAQVEEEQNDPTVLESEHEPSFVPPASAHQAPSTKATVVEESKQV 207

Query: 385 KSQKDPKDL 411
              ++P DL
Sbjct: 208 PEGREPSDL 216


>Z75956-3|CAJ90494.1|  217|Caenorhabditis elegans Hypothetical
           protein R31.2c protein.
          Length = 217

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
 Frame = +1

Query: 217 SQPAAAMSTGAIPDIDLPARYKRQ-PL---SEEEIAYINGGGIV*CPSYSATIIENLSQS 384
           + PA A    AIP I      ++  P    SE E +++        PS  AT++E   Q 
Sbjct: 113 TSPAVAGIAAAIPIISAQVEEEQNDPTVLESEHEPSFVPPASAHQAPSTKATVVEESKQV 172

Query: 385 KSQKDPKDL 411
              ++P DL
Sbjct: 173 PEGREPSDL 181


>Z75956-2|CAJ90493.2|  384|Caenorhabditis elegans Hypothetical
           protein R31.2b protein.
          Length = 384

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
 Frame = +1

Query: 217 SQPAAAMSTGAIPDIDLPARYKRQ-PL---SEEEIAYINGGGIV*CPSYSATIIENLSQS 384
           + PA A    AIP I      ++  P    SE E +++        PS  AT++E   Q 
Sbjct: 280 TSPAVAGIAAAIPIISAQVEEEQNDPTVLESEHEPSFVPPASAHQAPSTKATVVEESKQV 339

Query: 385 KSQKDPKDL 411
              ++P DL
Sbjct: 340 PEGREPSDL 348


>Z75956-1|CAB00128.2|  489|Caenorhabditis elegans Hypothetical
           protein R31.2a protein.
          Length = 489

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
 Frame = +1

Query: 217 SQPAAAMSTGAIPDIDLPARYKRQ-PL---SEEEIAYINGGGIV*CPSYSATIIENLSQS 384
           + PA A    AIP I      ++  P    SE E +++        PS  AT++E   Q 
Sbjct: 385 TSPAVAGIAAAIPIISAQVEEEQNDPTVLESEHEPSFVPPASAHQAPSTKATVVEESKQV 444

Query: 385 KSQKDPKDL 411
              ++P DL
Sbjct: 445 PEGREPSDL 453


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,286,315
Number of Sequences: 27780
Number of extensions: 160162
Number of successful extensions: 461
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 448
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)