Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19o05
         (360 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132876-37|CAN99761.1| 1156|Caenorhabditis elegans Hypothetical...    31   0.24 
AL132876-36|CAD21670.3| 1138|Caenorhabditis elegans Hypothetical...    31   0.24 
U10414-10|AAA19077.1|  176|Caenorhabditis elegans Hypothetical p...    27   5.2  
Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical pr...    26   9.1  
Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical pr...    26   9.1  
AF040657-6|AAB95051.2|  261|Caenorhabditis elegans Hypothetical ...    26   9.1  
AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein.      26   9.1  

>AL132876-37|CAN99761.1| 1156|Caenorhabditis elegans Hypothetical
           protein Y105E8A.23b protein.
          Length = 1156

 Score = 31.1 bits (67), Expect = 0.24
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
 Frame = +1

Query: 82  SEAPKAAVTACIHSNLATQQWEDVALFPL---VHHIDSCN 192
           S+ P   + AC+    AT+   DVALFP    +H   SCN
Sbjct: 799 SDEPWQTLAACVEIENATRYGSDVALFPSQLPIHQDGSCN 838


>AL132876-36|CAD21670.3| 1138|Caenorhabditis elegans Hypothetical
           protein Y105E8A.23a protein.
          Length = 1138

 Score = 31.1 bits (67), Expect = 0.24
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
 Frame = +1

Query: 82  SEAPKAAVTACIHSNLATQQWEDVALFPL---VHHIDSCN 192
           S+ P   + AC+    AT+   DVALFP    +H   SCN
Sbjct: 799 SDEPWQTLAACVEIENATRYGSDVALFPSQLPIHQDGSCN 838


>U10414-10|AAA19077.1|  176|Caenorhabditis elegans Hypothetical
           protein F42A10.6 protein.
          Length = 176

 Score = 26.6 bits (56), Expect = 5.2
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +1

Query: 124 NLATQQWEDVALFPLVHHIDSC 189
           N+AT  W  V  F L+++ID+C
Sbjct: 91  NMATCGWSSVPTFGLLNNIDAC 112


>Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical protein
            C02B4.1 protein.
          Length = 1461

 Score = 25.8 bits (54), Expect = 9.1
 Identities = 14/52 (26%), Positives = 20/52 (38%), Gaps = 3/52 (5%)
 Frame = +1

Query: 64   CTTEDMSEAPKAAVTACIHSNLATQQW---EDVALFPLVHHIDSCNQKRREC 210
            CT +D S+  +     C HS L   +W   E  + F     I  C+     C
Sbjct: 935  CTEDDASQTRRCVNGPCEHSYLTWSEWTTCETCSSFDSRKRIAKCDGTTENC 986


>Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical protein
            C02B4.1 protein.
          Length = 1461

 Score = 25.8 bits (54), Expect = 9.1
 Identities = 14/52 (26%), Positives = 20/52 (38%), Gaps = 3/52 (5%)
 Frame = +1

Query: 64   CTTEDMSEAPKAAVTACIHSNLATQQW---EDVALFPLVHHIDSCNQKRREC 210
            CT +D S+  +     C HS L   +W   E  + F     I  C+     C
Sbjct: 935  CTEDDASQTRRCVNGPCEHSYLTWSEWTTCETCSSFDSRKRIAKCDGTTENC 986


>AF040657-6|AAB95051.2|  261|Caenorhabditis elegans Hypothetical
           protein T20H9.2 protein.
          Length = 261

 Score = 25.8 bits (54), Expect = 9.1
 Identities = 15/51 (29%), Positives = 21/51 (41%)
 Frame = +1

Query: 61  QCTTEDMSEAPKAAVTACIHSNLATQQWEDVALFPLVHHIDSCNQKRRECF 213
           Q    D+    K A +  IHSN A ++W       +  H  +   K  ECF
Sbjct: 17  QTVCRDLKILLKHAESVEIHSNQARREWRSYRNDYIDRHFTTELAKLEECF 67


>AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein.
          Length = 1461

 Score = 25.8 bits (54), Expect = 9.1
 Identities = 14/52 (26%), Positives = 20/52 (38%), Gaps = 3/52 (5%)
 Frame = +1

Query: 64   CTTEDMSEAPKAAVTACIHSNLATQQW---EDVALFPLVHHIDSCNQKRREC 210
            CT +D S+  +     C HS L   +W   E  + F     I  C+     C
Sbjct: 935  CTEDDASQTRRCVNGPCEHSYLTWSEWTTCETCSSFDSRKRIAKCDGTTENC 986


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,021,776
Number of Sequences: 27780
Number of extensions: 122308
Number of successful extensions: 313
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 313
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 492763868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)