Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19o02
         (599 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB209560-1|BAD92797.1| 1011|Homo sapiens polymerase (DNA directe...    32   1.3  
AK130577-1|BAC85385.1|  478|Homo sapiens protein ( Homo sapiens ...    31   3.1  
D86976-1|BAA13212.1| 1165|Homo sapiens KIAA0223 protein.               30   5.4  
BC035564-1|AAH35564.1| 1131|Homo sapiens HMHA1 protein protein.        30   5.4  
AF308066-1|AAN04658.1| 1136|Homo sapiens minor histocompatibilit...    30   5.4  
BC063293-1|AAH63293.1|  837|Homo sapiens ADAM metallopeptidase w...    29   9.4  
AK130609-1|BAC85393.1|  472|Homo sapiens protein ( Homo sapiens ...    29   9.4  

>AB209560-1|BAD92797.1| 1011|Homo sapiens polymerase (DNA directed),
            delta 1, catalytic subunit 125kDa variant protein.
          Length = 1011

 Score = 32.3 bits (70), Expect = 1.3
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = +1

Query: 277  TCGGSGPRWSSRVPRPCFC--TTSSRRLYSR 363
            +C  S P W+  VPR C+C  TT + R  SR
Sbjct: 934  SCASSSPSWARAVPRLCYCGGTTRAARRCSR 964


>AK130577-1|BAC85385.1|  478|Homo sapiens protein ( Homo sapiens
           cDNA FLJ27067 fis, clone SPL01356, highly similar to Ig
           gamma-1 chain C region. ).
          Length = 478

 Score = 31.1 bits (67), Expect = 3.1
 Identities = 15/24 (62%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
 Frame = +3

Query: 252 AKWLSCNG-DVWGVGPTVVFASAA 320
           AKWL  +G DVWG G TVV +SA+
Sbjct: 127 AKWLYYSGMDVWGRGTTVVVSSAS 150


>D86976-1|BAA13212.1| 1165|Homo sapiens KIAA0223 protein.
          Length = 1165

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +2

Query: 344 RGDYIHGRRPRSHLCVGEDAHLKH 415
           R D +  RRPR+H C+GE   + H
Sbjct: 168 RDDLLEARRPRAHECLGEALRVMH 191


>BC035564-1|AAH35564.1| 1131|Homo sapiens HMHA1 protein protein.
          Length = 1131

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +2

Query: 344 RGDYIHGRRPRSHLCVGEDAHLKH 415
           R D +  RRPR+H C+GE   + H
Sbjct: 134 RDDLLEARRPRAHECLGEALRVMH 157


>AF308066-1|AAN04658.1| 1136|Homo sapiens minor histocompatibility
           antigen HA-1 protein.
          Length = 1136

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +2

Query: 344 RGDYIHGRRPRSHLCVGEDAHLKH 415
           R D +  RRPR+H C+GE   + H
Sbjct: 139 RDDLLEARRPRAHECLGEALRVMH 162


>BC063293-1|AAH63293.1|  837|Homo sapiens ADAM metallopeptidase with
           thrombospondin type 1 motif, 4 protein.
          Length = 837

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 17/42 (40%), Positives = 19/42 (45%)
 Frame = +2

Query: 275 RRVGGRAHGGLRECRGPVSVQRARGDYIHGRRPRSHLCVGED 400
           R  GG      R+C  PV+  R  G Y  GRR R   C  ED
Sbjct: 534 RTCGGGVQFSSRDCTRPVT--RNGGKYCEGRRARFRSCNTED 573


>AK130609-1|BAC85393.1|  472|Homo sapiens protein ( Homo sapiens
           cDNA FLJ27099 fis, clone SPL04664, highly similar to Ig
           gamma-2 chain C region. ).
          Length = 472

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +3

Query: 252 AKWLSCNGDVWGVGPTVVFASAA 320
           A+WL    DVWG G TV+ +SA+
Sbjct: 126 AEWLLYGLDVWGKGTTVIVSSAS 148


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,819,632
Number of Sequences: 237096
Number of extensions: 2024439
Number of successful extensions: 5022
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5021
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)