Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte19o01
(645 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M80815-1|AAA52481.1| 461|Homo sapiens alpha-L-fucosidase protein. 241 1e-63
M29877-1|AAA35519.1| 461|Homo sapiens protein ( Human alpha-L-f... 241 1e-63
BC017338-1|AAH17338.1| 461|Homo sapiens fucosidase, alpha-L- 1,... 241 1e-63
AL590728-1|CAH74004.2| 466|Homo sapiens fucosidase, alpha-L-1, ... 241 1e-63
AB074175-1|BAE45738.1| 466|Homo sapiens alpha-L-fucosidase prot... 241 1e-63
BC051268-1|AAH51268.1| 467|Homo sapiens fucosidase, alpha-L- 2,... 223 4e-58
BC003060-1|AAH03060.1| 467|Homo sapiens fucosidase, alpha-L- 2,... 223 4e-58
AY358551-1|AAQ88915.1| 467|Homo sapiens RPQE227 protein. 223 4e-58
AL031320-8|CAB53746.1| 467|Homo sapiens RP1-20N2.5 protein. 223 4e-58
AK075458-1|BAC11633.1| 467|Homo sapiens protein ( Homo sapiens ... 223 4e-58
AK092914-1|BAC04002.1| 444|Homo sapiens protein ( Homo sapiens ... 188 2e-47
M10355-1|AAA52482.1| 353|Homo sapiens FUCA1 protein. 164 2e-40
AL031320-9|CAD92495.1| 165|Homo sapiens RP1-20N2.5 protein. 153 4e-37
AL596244-1|CAI39809.1| 451|Homo sapiens tubulin tyrosine ligase... 31 4.6
AL445587-2|CAI40706.1| 538|Homo sapiens tubulin tyrosine ligase... 31 4.6
AL445587-1|CAI40705.1| 451|Homo sapiens tubulin tyrosine ligase... 31 4.6
AL442634-2|CAI39985.1| 538|Homo sapiens tubulin tyrosine ligase... 31 4.6
AL442634-1|CAI39983.1| 451|Homo sapiens tubulin tyrosine ligase... 31 4.6
AL162423-1|CAH73979.1| 538|Homo sapiens tubulin tyrosine ligase... 31 4.6
AK125178-1|BAC86073.1| 235|Homo sapiens protein ( Homo sapiens ... 31 4.6
>M80815-1|AAA52481.1| 461|Homo sapiens alpha-L-fucosidase protein.
Length = 461
Score = 241 bits (590), Expect = 1e-63
Identities = 97/159 (61%), Positives = 127/159 (79%), Gaps = 1/159 (0%)
Frame = +2
Query: 170 KRYSPDWNDLDTRPLPEWYDKAKIGIFLHWGVYSVPGFGSEWFWSNWKG-GNRQCIDFMT 346
+RY+PDW LD+RPLP W+D+AK G+F+HWGV+SVP +GSEWFW +W+G G Q FM
Sbjct: 30 RRYTPDWPSLDSRPLPAWFDEAKFGVFIHWGVFSVPAWGSEWFWWHWQGEGRPQYQRFMR 89
Query: 347 KNYPPGFTYQEFAPAFKAEFFDPDKWADLFVKAGAKYVVLTSKHHEGFTLFPSKRSFSWN 526
NYPPGF+Y +F P F A FF P++WADLF AGAKYVVLT+KHHEGFT +PS S++WN
Sbjct: 90 DNYPPGFSYADFGPQFTARFFHPEEWADLFQAAGAKYVVLTTKHHEGFTNWPSPVSWNWN 149
Query: 527 SVEVGPKRDIVGDLAKAVRNTSLKFGVYHSLYEWFNPIY 643
S +VGP RD+VG+L A+R ++++G+YHSL EWF+P+Y
Sbjct: 150 SKDVGPHRDLVGELGTALRKRNIRYGLYHSLLEWFHPLY 188
>M29877-1|AAA35519.1| 461|Homo sapiens protein ( Human
alpha-L-fucosidase, complete cds. ).
Length = 461
Score = 241 bits (590), Expect = 1e-63
Identities = 97/159 (61%), Positives = 127/159 (79%), Gaps = 1/159 (0%)
Frame = +2
Query: 170 KRYSPDWNDLDTRPLPEWYDKAKIGIFLHWGVYSVPGFGSEWFWSNWKG-GNRQCIDFMT 346
+RY+PDW LD+RPLP W+D+AK G+F+HWGV+SVP +GSEWFW +W+G G Q FM
Sbjct: 30 RRYTPDWPSLDSRPLPAWFDEAKFGVFIHWGVFSVPAWGSEWFWWHWQGEGRPQYQRFMR 89
Query: 347 KNYPPGFTYQEFAPAFKAEFFDPDKWADLFVKAGAKYVVLTSKHHEGFTLFPSKRSFSWN 526
NYPPGF+Y +F P F A FF P++WADLF AGAKYVVLT+KHHEGFT +PS S++WN
Sbjct: 90 DNYPPGFSYADFGPQFTARFFHPEEWADLFQAAGAKYVVLTTKHHEGFTNWPSPVSWNWN 149
Query: 527 SVEVGPKRDIVGDLAKAVRNTSLKFGVYHSLYEWFNPIY 643
S +VGP RD+VG+L A+R ++++G+YHSL EWF+P+Y
Sbjct: 150 SKDVGPHRDLVGELGTALRKRNIRYGLYHSLLEWFHPLY 188
>BC017338-1|AAH17338.1| 461|Homo sapiens fucosidase, alpha-L- 1,
tissue protein.
Length = 461
Score = 241 bits (590), Expect = 1e-63
Identities = 97/159 (61%), Positives = 127/159 (79%), Gaps = 1/159 (0%)
Frame = +2
Query: 170 KRYSPDWNDLDTRPLPEWYDKAKIGIFLHWGVYSVPGFGSEWFWSNWKG-GNRQCIDFMT 346
+RY+PDW LD+RPLP W+D+AK G+F+HWGV+SVP +GSEWFW +W+G G Q FM
Sbjct: 30 RRYTPDWPSLDSRPLPAWFDEAKFGVFIHWGVFSVPAWGSEWFWWHWQGEGRPQYQRFMR 89
Query: 347 KNYPPGFTYQEFAPAFKAEFFDPDKWADLFVKAGAKYVVLTSKHHEGFTLFPSKRSFSWN 526
NYPPGF+Y +F P F A FF P++WADLF AGAKYVVLT+KHHEGFT +PS S++WN
Sbjct: 90 DNYPPGFSYADFGPQFTARFFHPEEWADLFQAAGAKYVVLTTKHHEGFTNWPSPVSWNWN 149
Query: 527 SVEVGPKRDIVGDLAKAVRNTSLKFGVYHSLYEWFNPIY 643
S +VGP RD+VG+L A+R ++++G+YHSL EWF+P+Y
Sbjct: 150 SKDVGPHRDLVGELGTALRKRNIRYGLYHSLLEWFHPLY 188
>AL590728-1|CAH74004.2| 466|Homo sapiens fucosidase, alpha-L-1,
tissue protein.
Length = 466
Score = 241 bits (590), Expect = 1e-63
Identities = 97/159 (61%), Positives = 127/159 (79%), Gaps = 1/159 (0%)
Frame = +2
Query: 170 KRYSPDWNDLDTRPLPEWYDKAKIGIFLHWGVYSVPGFGSEWFWSNWKG-GNRQCIDFMT 346
+RY+PDW LD+RPLP W+D+AK G+F+HWGV+SVP +GSEWFW +W+G G Q FM
Sbjct: 35 RRYTPDWPSLDSRPLPAWFDEAKFGVFIHWGVFSVPAWGSEWFWWHWQGEGRPQYQRFMR 94
Query: 347 KNYPPGFTYQEFAPAFKAEFFDPDKWADLFVKAGAKYVVLTSKHHEGFTLFPSKRSFSWN 526
NYPPGF+Y +F P F A FF P++WADLF AGAKYVVLT+KHHEGFT +PS S++WN
Sbjct: 95 DNYPPGFSYADFGPQFTARFFHPEEWADLFQAAGAKYVVLTTKHHEGFTNWPSPVSWNWN 154
Query: 527 SVEVGPKRDIVGDLAKAVRNTSLKFGVYHSLYEWFNPIY 643
S +VGP RD+VG+L A+R ++++G+YHSL EWF+P+Y
Sbjct: 155 SKDVGPHRDLVGELGTALRKRNIRYGLYHSLLEWFHPLY 193
>AB074175-1|BAE45738.1| 466|Homo sapiens alpha-L-fucosidase
protein.
Length = 466
Score = 241 bits (590), Expect = 1e-63
Identities = 97/159 (61%), Positives = 127/159 (79%), Gaps = 1/159 (0%)
Frame = +2
Query: 170 KRYSPDWNDLDTRPLPEWYDKAKIGIFLHWGVYSVPGFGSEWFWSNWKG-GNRQCIDFMT 346
+RY+PDW LD+RPLP W+D+AK G+F+HWGV+SVP +GSEWFW +W+G G Q FM
Sbjct: 35 RRYTPDWPSLDSRPLPAWFDEAKFGVFIHWGVFSVPAWGSEWFWWHWQGEGRPQYQRFMR 94
Query: 347 KNYPPGFTYQEFAPAFKAEFFDPDKWADLFVKAGAKYVVLTSKHHEGFTLFPSKRSFSWN 526
NYPPGF+Y +F P F A FF P++WADLF AGAKYVVLT+KHHEGFT +PS S++WN
Sbjct: 95 DNYPPGFSYADFGPQFTARFFHPEEWADLFQAAGAKYVVLTTKHHEGFTNWPSPVSWNWN 154
Query: 527 SVEVGPKRDIVGDLAKAVRNTSLKFGVYHSLYEWFNPIY 643
S +VGP RD+VG+L A+R ++++G+YHSL EWF+P+Y
Sbjct: 155 SKDVGPHRDLVGELGTALRKRNIRYGLYHSLLEWFHPLY 193
>BC051268-1|AAH51268.1| 467|Homo sapiens fucosidase, alpha-L- 2,
plasma protein.
Length = 467
Score = 223 bits (545), Expect = 4e-58
Identities = 91/159 (57%), Positives = 124/159 (77%), Gaps = 2/159 (1%)
Frame = +2
Query: 173 RYSPDWNDLDTRPLPEWYDKAKIGIFLHWGVYSVPGFGSEWFWSNW-KGGNRQCIDFMTK 349
R+ P W LD R LP W+D+AK GIF+HWGV+SVP FGSEWFW W K + ++FM
Sbjct: 33 RFDPTWESLDARQLPAWFDQAKFGIFIHWGVFSVPSFGSEWFWWYWQKEKIPKYVEFMKD 92
Query: 350 NYPPGFTYQEFAPAFKAEFFDPDKWADLFVKAGAKYVVLTSKHHEGFTLFPSKRSFSWNS 529
NYPP F Y++F P F A+FF+ ++WAD+F +GAKY+VLTSKHHEGFTL+ S+ S++WN+
Sbjct: 93 NYPPSFKYEDFGPLFTAKFFNANQWADIFQASGAKYIVLTSKHHEGFTLWGSEYSWNWNA 152
Query: 530 VEVGPKRDIVGDLAKAVRN-TSLKFGVYHSLYEWFNPIY 643
++ GPKRDIV +L A+RN T L+FG+Y+SL+EWF+P++
Sbjct: 153 IDEGPKRDIVKELEVAIRNRTDLRFGLYYSLFEWFHPLF 191
>BC003060-1|AAH03060.1| 467|Homo sapiens fucosidase, alpha-L- 2,
plasma protein.
Length = 467
Score = 223 bits (545), Expect = 4e-58
Identities = 91/159 (57%), Positives = 124/159 (77%), Gaps = 2/159 (1%)
Frame = +2
Query: 173 RYSPDWNDLDTRPLPEWYDKAKIGIFLHWGVYSVPGFGSEWFWSNW-KGGNRQCIDFMTK 349
R+ P W LD R LP W+D+AK GIF+HWGV+SVP FGSEWFW W K + ++FM
Sbjct: 33 RFDPTWESLDARQLPAWFDQAKFGIFIHWGVFSVPSFGSEWFWWYWQKEKIPKYVEFMKD 92
Query: 350 NYPPGFTYQEFAPAFKAEFFDPDKWADLFVKAGAKYVVLTSKHHEGFTLFPSKRSFSWNS 529
NYPP F Y++F P F A+FF+ ++WAD+F +GAKY+VLTSKHHEGFTL+ S+ S++WN+
Sbjct: 93 NYPPSFKYEDFGPLFTAKFFNANQWADIFQASGAKYIVLTSKHHEGFTLWGSEYSWNWNA 152
Query: 530 VEVGPKRDIVGDLAKAVRN-TSLKFGVYHSLYEWFNPIY 643
++ GPKRDIV +L A+RN T L+FG+Y+SL+EWF+P++
Sbjct: 153 IDEGPKRDIVKELEVAIRNRTDLRFGLYYSLFEWFHPLF 191
>AY358551-1|AAQ88915.1| 467|Homo sapiens RPQE227 protein.
Length = 467
Score = 223 bits (545), Expect = 4e-58
Identities = 91/159 (57%), Positives = 124/159 (77%), Gaps = 2/159 (1%)
Frame = +2
Query: 173 RYSPDWNDLDTRPLPEWYDKAKIGIFLHWGVYSVPGFGSEWFWSNW-KGGNRQCIDFMTK 349
R+ P W LD R LP W+D+AK GIF+HWGV+SVP FGSEWFW W K + ++FM
Sbjct: 33 RFDPTWESLDARQLPAWFDQAKFGIFIHWGVFSVPSFGSEWFWWYWQKEKIPKYVEFMKD 92
Query: 350 NYPPGFTYQEFAPAFKAEFFDPDKWADLFVKAGAKYVVLTSKHHEGFTLFPSKRSFSWNS 529
NYPP F Y++F P F A+FF+ ++WAD+F +GAKY+VLTSKHHEGFTL+ S+ S++WN+
Sbjct: 93 NYPPSFKYEDFGPLFTAKFFNANQWADIFQASGAKYIVLTSKHHEGFTLWGSEYSWNWNA 152
Query: 530 VEVGPKRDIVGDLAKAVRN-TSLKFGVYHSLYEWFNPIY 643
++ GPKRDIV +L A+RN T L+FG+Y+SL+EWF+P++
Sbjct: 153 IDEGPKRDIVKELEVAIRNRTDLRFGLYYSLFEWFHPLF 191
>AL031320-8|CAB53746.1| 467|Homo sapiens RP1-20N2.5 protein.
Length = 467
Score = 223 bits (545), Expect = 4e-58
Identities = 91/159 (57%), Positives = 124/159 (77%), Gaps = 2/159 (1%)
Frame = +2
Query: 173 RYSPDWNDLDTRPLPEWYDKAKIGIFLHWGVYSVPGFGSEWFWSNW-KGGNRQCIDFMTK 349
R+ P W LD R LP W+D+AK GIF+HWGV+SVP FGSEWFW W K + ++FM
Sbjct: 33 RFDPTWESLDARQLPAWFDQAKFGIFIHWGVFSVPSFGSEWFWWYWQKEKIPKYVEFMKD 92
Query: 350 NYPPGFTYQEFAPAFKAEFFDPDKWADLFVKAGAKYVVLTSKHHEGFTLFPSKRSFSWNS 529
NYPP F Y++F P F A+FF+ ++WAD+F +GAKY+VLTSKHHEGFTL+ S+ S++WN+
Sbjct: 93 NYPPSFKYEDFGPLFTAKFFNANQWADIFQASGAKYIVLTSKHHEGFTLWGSEYSWNWNA 152
Query: 530 VEVGPKRDIVGDLAKAVRN-TSLKFGVYHSLYEWFNPIY 643
++ GPKRDIV +L A+RN T L+FG+Y+SL+EWF+P++
Sbjct: 153 IDEGPKRDIVKELEVAIRNRTDLRFGLYYSLFEWFHPLF 191
>AK075458-1|BAC11633.1| 467|Homo sapiens protein ( Homo sapiens
cDNA PSEC0151 fis, clone PLACE1007878, highly similar to
Fucosidase, alpha-L- 2, plasma. ).
Length = 467
Score = 223 bits (545), Expect = 4e-58
Identities = 91/159 (57%), Positives = 124/159 (77%), Gaps = 2/159 (1%)
Frame = +2
Query: 173 RYSPDWNDLDTRPLPEWYDKAKIGIFLHWGVYSVPGFGSEWFWSNW-KGGNRQCIDFMTK 349
R+ P W LD R LP W+D+AK GIF+HWGV+SVP FGSEWFW W K + ++FM
Sbjct: 33 RFDPTWESLDARQLPAWFDQAKFGIFIHWGVFSVPSFGSEWFWWYWQKEKIPKYVEFMKD 92
Query: 350 NYPPGFTYQEFAPAFKAEFFDPDKWADLFVKAGAKYVVLTSKHHEGFTLFPSKRSFSWNS 529
NYPP F Y++F P F A+FF+ ++WAD+F +GAKY+VLTSKHHEGFTL+ S+ S++WN+
Sbjct: 93 NYPPSFKYEDFGPLFTAKFFNANQWADIFQASGAKYIVLTSKHHEGFTLWGSEYSWNWNA 152
Query: 530 VEVGPKRDIVGDLAKAVRN-TSLKFGVYHSLYEWFNPIY 643
++ GPKRDIV +L A+RN T L+FG+Y+SL+EWF+P++
Sbjct: 153 IDEGPKRDIVKELEVAIRNRTDLRFGLYYSLFEWFHPLF 191
>AK092914-1|BAC04002.1| 444|Homo sapiens protein ( Homo sapiens
cDNA FLJ35595 fis, clone SPLEN2008007, highly similar to
TISSUE ALPHA-L-FUCOSIDASE PRECURSOR (EC 3.2.1.51). ).
Length = 444
Score = 188 bits (457), Expect = 2e-47
Identities = 81/158 (51%), Positives = 110/158 (69%)
Frame = +2
Query: 170 KRYSPDWNDLDTRPLPEWYDKAKIGIFLHWGVYSVPGFGSEWFWSNWKGGNRQCIDFMTK 349
+RY+PDW LD+RPLP W+++ K G+F+HWGV+SVP +GSEWFW +W+G R
Sbjct: 35 RRYTPDWPSLDSRPLPAWFNEVKFGVFIHWGVFSVPAWGSEWFWWHWQGEGRP------- 87
Query: 350 NYPPGFTYQEFAPAFKAEFFDPDKWADLFVKAGAKYVVLTSKHHEGFTLFPSKRSFSWNS 529
YQ F F P++WADLF GAKYVVLT+KHHEGFT +PS S++WNS
Sbjct: 88 ------QYQRF--------FHPEEWADLFQATGAKYVVLTTKHHEGFTNWPSPVSWNWNS 133
Query: 530 VEVGPKRDIVGDLAKAVRNTSLKFGVYHSLYEWFNPIY 643
+VGP RD+VG+L +R ++++G+YHSL EWF+P+Y
Sbjct: 134 KDVGPHRDLVGELGTGLRKRNIRYGLYHSLLEWFHPLY 171
>M10355-1|AAA52482.1| 353|Homo sapiens FUCA1 protein.
Length = 353
Score = 164 bits (399), Expect = 2e-40
Identities = 69/119 (57%), Positives = 91/119 (76%), Gaps = 1/119 (0%)
Frame = +2
Query: 290 EWFWSNWKG-GNRQCIDFMTKNYPPGFTYQEFAPAFKAEFFDPDKWADLFVKAGAKYVVL 466
E+ W +W+G G Q FM NYPPGF+Y +F P F A FF P++WADLF AGAKYVVL
Sbjct: 1 EFLWWHWQGEGRPQYQRFMRDNYPPGFSYADFGPQFTARFFHPEEWADLFQAAGAKYVVL 60
Query: 467 TSKHHEGFTLFPSKRSFSWNSVEVGPKRDIVGDLAKAVRNTSLKFGVYHSLYEWFNPIY 643
T+KHHEGFT +PS S++WNS +VGP RD+VG+L A+R ++++G+YHSL EWF+P+Y
Sbjct: 61 TTKHHEGFTNWPSPVSWNWNSKDVGPHRDLVGELGTALRKRNIRYGLYHSLLEWFHPLY 119
>AL031320-9|CAD92495.1| 165|Homo sapiens RP1-20N2.5 protein.
Length = 165
Score = 153 bits (372), Expect = 4e-37
Identities = 64/118 (54%), Positives = 82/118 (69%), Gaps = 1/118 (0%)
Frame = +2
Query: 173 RYSPDWNDLDTRPLPEWYDKAKIGIFLHWGVYSVPGFGSEWFWSNW-KGGNRQCIDFMTK 349
R+ P W LD R LP W+D+AK GIF+HWGV+SVP FGSEWFW W K + ++FM
Sbjct: 33 RFDPTWESLDARQLPAWFDQAKFGIFIHWGVFSVPSFGSEWFWWYWQKEKIPKYVEFMKD 92
Query: 350 NYPPGFTYQEFAPAFKAEFFDPDKWADLFVKAGAKYVVLTSKHHEGFTLFPSKRSFSW 523
NYPP F Y++F P F A+FF+ ++WAD+F +GAKY+VLTSKHHE + SF W
Sbjct: 93 NYPPSFKYEDFGPLFTAKFFNANQWADIFQASGAKYIVLTSKHHEA----TCRDSFMW 146
>AL596244-1|CAI39809.1| 451|Homo sapiens tubulin tyrosine
ligase-like family, member 11 protein.
Length = 451
Score = 30.7 bits (66), Expect = 4.6
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -1
Query: 237 FALSYHSGNGRVSKSFQSGEYRLFSILLCEL*SR 136
++L+ HSGN S S +G R FS +LC L S+
Sbjct: 86 YSLNIHSGNFIHSDSASTGSKRTFSSILCRLSSK 119
>AL445587-2|CAI40706.1| 538|Homo sapiens tubulin tyrosine
ligase-like family, member 11 protein.
Length = 538
Score = 30.7 bits (66), Expect = 4.6
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -1
Query: 237 FALSYHSGNGRVSKSFQSGEYRLFSILLCEL*SR 136
++L+ HSGN S S +G R FS +LC L S+
Sbjct: 435 YSLNIHSGNFIHSDSASTGSKRTFSSILCRLSSK 468
>AL445587-1|CAI40705.1| 451|Homo sapiens tubulin tyrosine
ligase-like family, member 11 protein.
Length = 451
Score = 30.7 bits (66), Expect = 4.6
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -1
Query: 237 FALSYHSGNGRVSKSFQSGEYRLFSILLCEL*SR 136
++L+ HSGN S S +G R FS +LC L S+
Sbjct: 86 YSLNIHSGNFIHSDSASTGSKRTFSSILCRLSSK 119
>AL442634-2|CAI39985.1| 538|Homo sapiens tubulin tyrosine
ligase-like family, member 11 protein.
Length = 538
Score = 30.7 bits (66), Expect = 4.6
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -1
Query: 237 FALSYHSGNGRVSKSFQSGEYRLFSILLCEL*SR 136
++L+ HSGN S S +G R FS +LC L S+
Sbjct: 435 YSLNIHSGNFIHSDSASTGSKRTFSSILCRLSSK 468
>AL442634-1|CAI39983.1| 451|Homo sapiens tubulin tyrosine
ligase-like family, member 11 protein.
Length = 451
Score = 30.7 bits (66), Expect = 4.6
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -1
Query: 237 FALSYHSGNGRVSKSFQSGEYRLFSILLCEL*SR 136
++L+ HSGN S S +G R FS +LC L S+
Sbjct: 86 YSLNIHSGNFIHSDSASTGSKRTFSSILCRLSSK 119
>AL162423-1|CAH73979.1| 538|Homo sapiens tubulin tyrosine
ligase-like family, member 11 protein.
Length = 538
Score = 30.7 bits (66), Expect = 4.6
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -1
Query: 237 FALSYHSGNGRVSKSFQSGEYRLFSILLCEL*SR 136
++L+ HSGN S S +G R FS +LC L S+
Sbjct: 435 YSLNIHSGNFIHSDSASTGSKRTFSSILCRLSSK 468
>AK125178-1|BAC86073.1| 235|Homo sapiens protein ( Homo sapiens
cDNA FLJ43188 fis, clone FCBBF3023895, weakly similar
to Caenorhabditis elegans tubulin-tyrosine ligase. ).
Length = 235
Score = 30.7 bits (66), Expect = 4.6
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -1
Query: 237 FALSYHSGNGRVSKSFQSGEYRLFSILLCEL*SR 136
++L+ HSGN S S +G R FS +LC L S+
Sbjct: 112 YSLNIHSGNFIHSDSASTGSKRTFSSILCRLSSK 145
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,777,721
Number of Sequences: 237096
Number of extensions: 2250192
Number of successful extensions: 4269
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 4128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4253
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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