Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte19o01
(645 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY119638-1|AAM50292.1| 494|Drosophila melanogaster RE43246p pro... 244 8e-65
AE014296-1964|AAO41255.1| 494|Drosophila melanogaster CG6128-PB... 244 8e-65
AE014296-1963|AAF50054.2| 494|Drosophila melanogaster CG6128-PA... 244 8e-65
AE014298-1831|AAF48217.1| 843|Drosophila melanogaster CG15721-P... 29 4.1
BT015951-1|AAV36836.1| 1553|Drosophila melanogaster SD16632p pro... 28 9.4
AY050240-1|AAK84939.1| 1331|Drosophila melanogaster SD02490p pro... 28 9.4
AF289997-1|AAG02462.1| 1340|Drosophila melanogaster thyroid horm... 28 9.4
AE014296-3687|AAZ66075.1| 175|Drosophila melanogaster CG33770-P... 28 9.4
AE014296-113|AAN11445.1| 1331|Drosophila melanogaster CG12031-PB... 28 9.4
AE014296-112|AAF47395.4| 1553|Drosophila melanogaster CG12031-PA... 28 9.4
>AY119638-1|AAM50292.1| 494|Drosophila melanogaster RE43246p
protein.
Length = 494
Score = 244 bits (597), Expect = 8e-65
Identities = 104/159 (65%), Positives = 128/159 (80%), Gaps = 2/159 (1%)
Frame = +2
Query: 173 RYSPDWNDLDTRPLPEWYDKAKIGIFLHWGVYSVPGFGSEWFWSNWKG-GNRQCIDFMTK 349
RY P+W LD RPLP+WYD AK+GIFLH+GVYSVP FGSEWFW+NWK N + + FM +
Sbjct: 33 RYQPNWASLDQRPLPQWYDDAKVGIFLHYGVYSVPSFGSEWFWTNWKNLRNPEYVQFMQR 92
Query: 350 NYPPGFTYQEFAPAFKAEFFDPDKWADLFVKAGAKYVVLTSKHHEGFTLFPSKRSFSWNS 529
NY P FTYQEFA F AE F+ KWA LF +GA+YVVLTSKHH+GFTL+PSK S+ WNS
Sbjct: 93 NYKPDFTYQEFASQFTAELFNATKWALLFKDSGARYVVLTSKHHDGFTLWPSKNSYGWNS 152
Query: 530 VEVGPKRDIVGDLAKAVRNTS-LKFGVYHSLYEWFNPIY 643
++VGPKRDIV +LA A+R S L+FG+Y+SL+EWFNP++
Sbjct: 153 MDVGPKRDIVKELAAAIRKESDLRFGLYYSLFEWFNPLW 191
>AE014296-1964|AAO41255.1| 494|Drosophila melanogaster CG6128-PB,
isoform B protein.
Length = 494
Score = 244 bits (597), Expect = 8e-65
Identities = 104/159 (65%), Positives = 128/159 (80%), Gaps = 2/159 (1%)
Frame = +2
Query: 173 RYSPDWNDLDTRPLPEWYDKAKIGIFLHWGVYSVPGFGSEWFWSNWKG-GNRQCIDFMTK 349
RY P+W LD RPLP+WYD AK+GIFLH+GVYSVP FGSEWFW+NWK N + + FM +
Sbjct: 33 RYQPNWASLDQRPLPQWYDDAKVGIFLHYGVYSVPSFGSEWFWTNWKNLRNPEYVQFMQR 92
Query: 350 NYPPGFTYQEFAPAFKAEFFDPDKWADLFVKAGAKYVVLTSKHHEGFTLFPSKRSFSWNS 529
NY P FTYQEFA F AE F+ KWA LF +GA+YVVLTSKHH+GFTL+PSK S+ WNS
Sbjct: 93 NYKPDFTYQEFASQFTAELFNATKWALLFKDSGARYVVLTSKHHDGFTLWPSKNSYGWNS 152
Query: 530 VEVGPKRDIVGDLAKAVRNTS-LKFGVYHSLYEWFNPIY 643
++VGPKRDIV +LA A+R S L+FG+Y+SL+EWFNP++
Sbjct: 153 MDVGPKRDIVKELAAAIRKESDLRFGLYYSLFEWFNPLW 191
>AE014296-1963|AAF50054.2| 494|Drosophila melanogaster CG6128-PA,
isoform A protein.
Length = 494
Score = 244 bits (597), Expect = 8e-65
Identities = 104/159 (65%), Positives = 128/159 (80%), Gaps = 2/159 (1%)
Frame = +2
Query: 173 RYSPDWNDLDTRPLPEWYDKAKIGIFLHWGVYSVPGFGSEWFWSNWKG-GNRQCIDFMTK 349
RY P+W LD RPLP+WYD AK+GIFLH+GVYSVP FGSEWFW+NWK N + + FM +
Sbjct: 33 RYQPNWASLDQRPLPQWYDDAKVGIFLHYGVYSVPSFGSEWFWTNWKNLRNPEYVQFMQR 92
Query: 350 NYPPGFTYQEFAPAFKAEFFDPDKWADLFVKAGAKYVVLTSKHHEGFTLFPSKRSFSWNS 529
NY P FTYQEFA F AE F+ KWA LF +GA+YVVLTSKHH+GFTL+PSK S+ WNS
Sbjct: 93 NYKPDFTYQEFASQFTAELFNATKWALLFKDSGARYVVLTSKHHDGFTLWPSKNSYGWNS 152
Query: 530 VEVGPKRDIVGDLAKAVRNTS-LKFGVYHSLYEWFNPIY 643
++VGPKRDIV +LA A+R S L+FG+Y+SL+EWFNP++
Sbjct: 153 MDVGPKRDIVKELAAAIRKESDLRFGLYYSLFEWFNPLW 191
>AE014298-1831|AAF48217.1| 843|Drosophila melanogaster CG15721-PA
protein.
Length = 843
Score = 29.5 bits (63), Expect = 4.1
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +2
Query: 452 KYVVLTSKHHEGFTLFPSKRSFSWNSVEVGPKRDIVGDLAKAVRNTSLKFGVYHS 616
KY+ S H T PSK S S N+V+V P+++ + T F Y+S
Sbjct: 343 KYITTASPQHATTTARPSKPSLSINAVQV-PEQEAEKTTSTEPTTTYKSFNSYNS 396
>BT015951-1|AAV36836.1| 1553|Drosophila melanogaster SD16632p
protein.
Length = 1553
Score = 28.3 bits (60), Expect = 9.4
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = -2
Query: 302 SKTIRIQNRAQNRRPNVGKCLFLLYHTTLATVVYPNRSNQENTAYLVFYYANYDHDDCV 126
S +IR Q +N + + F+ Y T L + +P T YL + ANYD V
Sbjct: 741 SISIRSQTN-KNSQVRIWVVEFVFYSTPLQSS-HPKEQGSRRTVYLTYEQANYDFSKTV 797
>AY050240-1|AAK84939.1| 1331|Drosophila melanogaster SD02490p
protein.
Length = 1331
Score = 28.3 bits (60), Expect = 9.4
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = -2
Query: 302 SKTIRIQNRAQNRRPNVGKCLFLLYHTTLATVVYPNRSNQENTAYLVFYYANYDHDDCV 126
S +IR Q +N + + F+ Y T L + +P T YL + ANYD V
Sbjct: 519 SISIRSQTN-KNSQVRIWVVEFVFYSTPLQSS-HPKEQGSRRTVYLTYEQANYDFSKTV 575
>AF289997-1|AAG02462.1| 1340|Drosophila melanogaster thyroid hormone
receptor-associatedprotein TRAP170 protein.
Length = 1340
Score = 28.3 bits (60), Expect = 9.4
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = -2
Query: 302 SKTIRIQNRAQNRRPNVGKCLFLLYHTTLATVVYPNRSNQENTAYLVFYYANYDHDDCV 126
S +IR Q +N + + F+ Y T L + +P T YL + ANYD V
Sbjct: 528 SISIRSQTN-KNSQVRIWVVEFVFYSTPLQSS-HPKEQGSRRTVYLTYEQANYDFSKTV 584
>AE014296-3687|AAZ66075.1| 175|Drosophila melanogaster CG33770-PA
protein.
Length = 175
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +3
Query: 492 LCSRQNVRSVGIPSKWAQNAISSGTWLRRCETQA 593
+C+ N + + KW +N + G +LR+C A
Sbjct: 88 VCNIVNAAKINLFKKWYKNLLKYGNFLRQCPLNA 121
>AE014296-113|AAN11445.1| 1331|Drosophila melanogaster CG12031-PB,
isoform B protein.
Length = 1331
Score = 28.3 bits (60), Expect = 9.4
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = -2
Query: 302 SKTIRIQNRAQNRRPNVGKCLFLLYHTTLATVVYPNRSNQENTAYLVFYYANYDHDDCV 126
S +IR Q +N + + F+ Y T L + +P T YL + ANYD V
Sbjct: 519 SISIRSQTN-KNSQVRIWVVEFVFYSTPLQSS-HPKEQGSRRTVYLTYEQANYDFSKTV 575
>AE014296-112|AAF47395.4| 1553|Drosophila melanogaster CG12031-PA,
isoform A protein.
Length = 1553
Score = 28.3 bits (60), Expect = 9.4
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = -2
Query: 302 SKTIRIQNRAQNRRPNVGKCLFLLYHTTLATVVYPNRSNQENTAYLVFYYANYDHDDCV 126
S +IR Q +N + + F+ Y T L + +P T YL + ANYD V
Sbjct: 741 SISIRSQTN-KNSQVRIWVVEFVFYSTPLQSS-HPKEQGSRRTVYLTYEQANYDFSKTV 797
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,928,896
Number of Sequences: 53049
Number of extensions: 672467
Number of successful extensions: 1624
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1618
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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